RNA–Protein interactions for RNA: ENST00000405218.6

ETV1-206, Transcript of ETS variant 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene ETV1, Length 3,391 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ETV1-206ENST00000405218 NISCHQ9Y2I1 1504 aa20.5■□□□□ 0.87
ETV1-206ENST00000405218 CCDC180Q9P1Z9 1646 aa17.57■□□□□ 0.4
ETV1-206ENST00000405218 ZCCHC6Q5VYS8 1495 aaKnown RBP17.38■□□□□ 0.37
ETV1-206ENST00000405218 SHROOM4Q9ULL8 1493 aa17.18■□□□□ 0.34
ETV1-206ENST00000405218 DCAF1Q9Y4B6 1507 aa16.97■□□□□ 0.31
ETV1-206ENST00000405218 SUPT5HO00267 1087 aaKnown RBP16.85■□□□□ 0.29
ETV1-206ENST00000405218 DCAF8L2P0C7V8 631 aa16.64■□□□□ 0.25
ETV1-206ENST00000405218 CHIC1Q5VXU3 224 aa16.52■□□□□ 0.24
ETV1-206ENST00000405218 MYO15BQ96JP2 1530 aa16.51■□□□□ 0.23
ETV1-206ENST00000405218 ABCC9O60706 1549 aa16.41■□□□□ 0.22
ETV1-206ENST00000405218 SCRIBQ14160 1630 aa16.25■□□□□ 0.19
ETV1-206ENST00000405218 NACADO15069 1562 aa16.19■□□□□ 0.18
ETV1-206ENST00000405218 RSF1Q96T23 1441 aaPredicted RBP16.17■□□□□ 0.18
ETV1-206ENST00000405218 RB1CC1Q8TDY2 1594 aa16.07■□□□□ 0.16
ETV1-206ENST00000405218 HRCP23327 699 aa16.04■□□□□ 0.16
ETV1-206ENST00000405218 LOC105371045A0A1W2PR82 267 aa15.9■□□□□ 0.14
ETV1-206ENST00000405218 PCGF6Q9BYE7 350 aa15.9■□□□□ 0.14
ETV1-206ENST00000405218 CECR2Q9BXF3 1484 aa15.87■□□□□ 0.13
ETV1-206ENST00000405218 MROH2BQ7Z745 1585 aa15.87■□□□□ 0.13
ETV1-206ENST00000405218 BAZ1AQ9NRL2 1556 aaPredicted RBP15.8■□□□□ 0.12
ETV1-206ENST00000405218 TRIM41Q8WV44 630 aa15.8■□□□□ 0.12
ETV1-206ENST00000405218 WIZO95785 1651 aa15.78■□□□□ 0.12
ETV1-206ENST00000405218 TRIM26Q12899 539 aaPredicted RBP15.75■□□□□ 0.11
ETV1-206ENST00000405218 EIF4G1Q04637 1599 aaKnown RBP15.71■□□□□ 0.1
ETV1-206ENST00000405218 TOP2AP11388 1531 aaKnown RBP15.64■□□□□ 0.09
ETV1-206ENST00000405218 UNC13AQ9UPW8 1703 aa15.63■□□□□ 0.09
ETV1-206ENST00000405218 SMARCA4P51532 1647 aa15.63■□□□□ 0.09
ETV1-206ENST00000405218 PPARGC1BQ86YN6 1023 aaKnown RBP15.52■□□□□ 0.07
ETV1-206ENST00000405218 FAM9AQ8IZU1 332 aaPredicted RBP15.52■□□□□ 0.07
ETV1-206ENST00000405218 SMARCA2P51531 1590 aa15.52■□□□□ 0.07
ETV1-206ENST00000405218 ZEB1P37275 1124 aaPredicted RBP15.49■□□□□ 0.07
ETV1-206ENST00000405218 CCDC88BA6NC98 1476 aa15.48■□□□□ 0.07
ETV1-206ENST00000405218 PEG3Q9GZU2 1588 aa15.42■□□□□ 0.06
ETV1-206ENST00000405218 BICRAQ9NZM4 1560 aa15.42■□□□□ 0.06
ETV1-206ENST00000405218 ABCC8Q09428 1581 aa15.38■□□□□ 0.05
ETV1-206ENST00000405218 EEA1Q15075 1411 aa15.35■□□□□ 0.05
ETV1-206ENST00000405218 WRNQ14191 1432 aaPredicted RBP eCLIP15.31■□□□□ 0.04
ETV1-206ENST00000405218 EHMT2Q96KQ7 1210 aa15.26■□□□□ 0.03
ETV1-206ENST00000405218 TNIKQ9UKE5 1360 aa15.25■□□□□ 0.03
ETV1-206ENST00000405218 SOGA1O94964 1423 aa15.22■□□□□ 0.03
ETV1-206ENST00000405218 CEP162Q5TB80 1403 aa15.22■□□□□ 0.03
ETV1-206ENST00000405218 ATAD2BQ9ULI0 1458 aa15.18■□□□□ 0.02
ETV1-206ENST00000405218 PABPN1Q86U42 306 aaKnown RBP eCLIP15.18■□□□□ 0.02
ETV1-206ENST00000405218 GOLGA3Q08378 1498 aa15.17■□□□□ 0.02
ETV1-206ENST00000405218 CSRNP3Q8WYN3 585 aa15.16■□□□□ 0.02
ETV1-206ENST00000405218 BAZ1BQ9UIG0 1483 aaKnown RBP15.14■□□□□ 0.01
ETV1-206ENST00000405218 KIF21BO75037 1637 aa15.13■□□□□ 0.01
ETV1-206ENST00000405218 RUSC2Q8N2Y8 1516 aa15.13■□□□□ 0.01
ETV1-206ENST00000405218 SYNJ1O43426 1573 aa15.13■□□□□ 0.01
ETV1-206ENST00000405218 CEP164Q9UPV0 1460 aa15.09■□□□□ 0.01
ETV1-206ENST00000405218 UBTFP17480 764 aaKnown RBP15.01□□□□□ -0.01
ETV1-206ENST00000405218 TOP2BQ02880 1626 aa15.01□□□□□ -0.01
ETV1-206ENST00000405218 HMGXB3Q12766 1538 aa14.99□□□□□ -0.01
ETV1-206ENST00000405218 BIVM-ERCC5R4GMW8 1640 aa14.99□□□□□ -0.01
ETV1-206ENST00000405218 CCER1Q8TC90 406 aaPredicted RBP14.99□□□□□ -0.01
ETV1-206ENST00000405218 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.98□□□□□ -0.01
ETV1-206ENST00000405218 NCAPD3P42695 1498 aa14.94□□□□□ -0.02
ETV1-206ENST00000405218 CLIP1P30622 1438 aa14.93□□□□□ -0.02
ETV1-206ENST00000405218 VPS8Q8N3P4 1428 aa14.92□□□□□ -0.02
ETV1-206ENST00000405218 ERICH3Q5RHP9 1530 aa14.9□□□□□ -0.02
ETV1-206ENST00000405218 RAPGEF2Q9Y4G8 1499 aa14.89□□□□□ -0.03
ETV1-206ENST00000405218 PRXQ9BXM0 1461 aa14.84□□□□□ -0.03
ETV1-206ENST00000405218 TTBK1Q5TCY1 1321 aaPredicted RBP14.81□□□□□ -0.04
ETV1-206ENST00000405218 CFTRP13569 1480 aa14.8□□□□□ -0.04
ETV1-206ENST00000405218 CUX1P39880 1505 aa14.8□□□□□ -0.04
ETV1-206ENST00000405218 PRDM2Q13029 1718 aa14.8□□□□□ -0.04
ETV1-206ENST00000405218 KIF27Q86VH2 1401 aa14.74□□□□□ -0.05
ETV1-206ENST00000405218 APLP2Q06481 763 aa14.73□□□□□ -0.05
ETV1-206ENST00000405218 ARAP1Q96P48 1450 aa14.72□□□□□ -0.05
ETV1-206ENST00000405218 DIEXFQ68CQ4 756 aaKnown RBP14.72□□□□□ -0.05
ETV1-206ENST00000405218 SCAF1Q9H7N4 1312 aaKnown RBP14.7□□□□□ -0.06
ETV1-206ENST00000405218 ZNF316A6NFI3 1004 aaPredicted RBP14.66□□□□□ -0.06
ETV1-206ENST00000405218 HNRNPUL2Q1KMD3 747 aaKnown RBP14.63□□□□□ -0.07
ETV1-206ENST00000405218 ACIN1Q9UKV3 1341 aaKnown RBP14.63□□□□□ -0.07
ETV1-206ENST00000405218 CLSPNQ9HAW4 1339 aa14.62□□□□□ -0.07
ETV1-206ENST00000405218 RRBP1Q9P2E9 1410 aaKnown RBP14.6□□□□□ -0.07
ETV1-206ENST00000405218 CADPSQ9ULU8 1353 aa14.59□□□□□ -0.07
ETV1-206ENST00000405218 ARHGAP35Q9NRY4 1499 aa14.59□□□□□ -0.07
ETV1-206ENST00000405218 CENPBP07199 599 aaPredicted RBP14.58□□□□□ -0.08
ETV1-206ENST00000405218 PELP1Q8IZL8 1130 aaKnown RBP14.57□□□□□ -0.08
ETV1-206ENST00000405218 CUX2O14529 1486 aa14.56□□□□□ -0.08
ETV1-206ENST00000405218 MAP3K1Q13233 1512 aa14.56□□□□□ -0.08
ETV1-206ENST00000405218 RANGAP1P46060 587 aaPredicted RBP14.54□□□□□ -0.08
ETV1-206ENST00000405218 IGF1RP08069 1367 aa14.54□□□□□ -0.08
ETV1-206ENST00000405218 NEUROD1Q13562 356 aa14.54□□□□□ -0.08
ETV1-206ENST00000405218 FGD5Q6ZNL6 1462 aa14.52□□□□□ -0.09
ETV1-206ENST00000405218 DHX57Q6P158 1386 aaKnown RBP14.51□□□□□ -0.09
ETV1-206ENST00000405218 KANK4Q5T7N3 995 aaPredicted RBP14.51□□□□□ -0.09
ETV1-206ENST00000405218 CC2D2AQ9P2K1 1620 aa14.49□□□□□ -0.09
ETV1-206ENST00000405218 TIAM1Q13009 1591 aa14.48□□□□□ -0.09
ETV1-206ENST00000405218 CARMIL1Q5VZK9 1371 aa14.47□□□□□ -0.09
ETV1-206ENST00000405218 CCNB3Q8WWL7 1395 aa14.47□□□□□ -0.09
ETV1-206ENST00000405218 DNMBPQ6XZF7 1577 aa14.45□□□□□ -0.1
ETV1-206ENST00000405218 FANCD2Q9BXW9 1451 aa14.44□□□□□ -0.1
ETV1-206ENST00000405218 CFAP43Q8NDM7 1665 aa14.42□□□□□ -0.1
ETV1-206ENST00000405218 ABCA10Q8WWZ4 1543 aa14.42□□□□□ -0.1
ETV1-206ENST00000405218 FHAD1B1AJZ9 1412 aa14.42□□□□□ -0.1
ETV1-206ENST00000405218 CUL7Q14999 1698 aa14.4□□□□□ -0.1
ETV1-206ENST00000405218 LRRC9Q6ZRR7 1453 aa14.39□□□□□ -0.11
ETV1-206ENST00000405218 EFCAB5A4FU69 1503 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms