RNA–Protein interactions for RNA: ENST00000403303.5

CCDC178-204, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC178, Length 3,354 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-204ENST00000403303 CHIC1Q5VXU3 224 aa10.33□□□□□ -0.76
CCDC178-204ENST00000403303 AEBP2Q6ZN18 517 aaPredicted RBP10.31□□□□□ -0.76
CCDC178-204ENST00000403303 POTEDQ86YR6 584 aa9.43□□□□□ -0.9
CCDC178-204ENST00000403303 PHF23Q9BUL5 403 aaPredicted RBP9.4□□□□□ -0.91
CCDC178-204ENST00000403303 EHMT2Q96KQ7 1210 aa9.33□□□□□ -0.92
CCDC178-204ENST00000403303 SENP3Q9H4L4 574 aaPredicted RBP9.21□□□□□ -0.94
CCDC178-204ENST00000403303 KCNA4P22459 653 aa8.73□□□□□ -1.01
CCDC178-204ENST00000403303 PLPPR3Q6T4P5 718 aa8.69□□□□□ -1.02
CCDC178-204ENST00000403303 ADRA2BP18089 450 aa8.62□□□□□ -1.03
CCDC178-204ENST00000403303 SLC24A1O60721 1099 aa8.59□□□□□ -1.03
CCDC178-204ENST00000403303 MSH5O43196 834 aa8.5□□□□□ -1.05
CCDC178-204ENST00000403303 FOXD1Q16676 465 aa8.49□□□□□ -1.05
CCDC178-204ENST00000403303 CSRNP3Q8WYN3 585 aa8.47□□□□□ -1.05
CCDC178-204ENST00000403303 RTN4Q9NQC3 1192 aaKnown RBP8.4□□□□□ -1.07
CCDC178-204ENST00000403303 SLC4A1APQ9BWU0 796 aaKnown RBP8.28□□□□□ -1.08
CCDC178-204ENST00000403303 PPP6R1Q9UPN7 881 aa8.26□□□□□ -1.09
CCDC178-204ENST00000403303 ZBTB22O15209 634 aa8.06□□□□□ -1.12
CCDC178-204ENST00000403303 PRKCSHP14314 528 aaPredicted RBP7.94□□□□□ -1.14
CCDC178-204ENST00000403303 AMER1Q5JTC6 1135 aaPredicted RBP7.88□□□□□ -1.15
CCDC178-204ENST00000403303 PPP4R3CPQ6ZMV5 832 aa7.88□□□□□ -1.15
CCDC178-204ENST00000403303 NPM3O75607 178 aaKnown RBP7.86□□□□□ -1.15
CCDC178-204ENST00000403303 PIAS4Q8N2W9 510 aaPredicted RBP7.79□□□□□ -1.16
CCDC178-204ENST00000403303 FKBP8Q14318 412 aa7.76□□□□□ -1.17
CCDC178-204ENST00000403303 DCAF8L2P0C7V8 631 aa7.67□□□□□ -1.18
CCDC178-204ENST00000403303 CACNB1Q02641 598 aaPredicted RBP7.66□□□□□ -1.18
CCDC178-204ENST00000403303 NCBP3Q53F19 620 aaKnown RBP7.6□□□□□ -1.19
CCDC178-204ENST00000403303 NISCHQ9Y2I1 1504 aa7.6□□□□□ -1.19
CCDC178-204ENST00000403303 HAP1P54257 671 aaPredicted RBP7.57□□□□□ -1.2
CCDC178-204ENST00000403303 FOXD4L1Q9NU39 408 aa7.53□□□□□ -1.2
CCDC178-204ENST00000403303 TPRNQ4KMQ1 711 aa7.51□□□□□ -1.21
CCDC178-204ENST00000403303 TAOK2Q9UL54 1235 aa7.44□□□□□ -1.22
CCDC178-204ENST00000403303 MAPK8IP2Q13387 824 aaPredicted RBP7.43□□□□□ -1.22
CCDC178-204ENST00000403303 TULP1O00294 542 aaPredicted RBP7.41□□□□□ -1.22
CCDC178-204ENST00000403303 PLCB2Q00722 1185 aa7.41□□□□□ -1.22
CCDC178-204ENST00000403303 TIMELESSQ9UNS1 1208 aa7.41□□□□□ -1.22
CCDC178-204ENST00000403303 FBLN2P98095 1184 aa7.34□□□□□ -1.23
CCDC178-204ENST00000403303 BCANQ96GW7 911 aa7.32□□□□□ -1.24
CCDC178-204ENST00000403303 CNKSR2Q8WXI2 1034 aa7.3□□□□□ -1.24
CCDC178-204ENST00000403303 POTEHQ6S545 545 aa7.27□□□□□ -1.25
CCDC178-204ENST00000403303 CFAP44Q96MT7 982 aa7.23□□□□□ -1.25
CCDC178-204ENST00000403303 KDM2AQ9Y2K7 1162 aa7.23□□□□□ -1.25
CCDC178-204ENST00000403303 SLC4A2P04920 1241 aa7.22□□□□□ -1.25
CCDC178-204ENST00000403303 CCDC180Q9P1Z9 1646 aa7.19□□□□□ -1.26
CCDC178-204ENST00000403303 ATF5Q9Y2D1 282 aaPredicted RBP7.17□□□□□ -1.26
CCDC178-204ENST00000403303 PAXIP1Q6ZW49 1069 aaPredicted RBP7.15□□□□□ -1.26
CCDC178-204ENST00000403303 DAXXQ9UER7 740 aaPredicted RBP7.14□□□□□ -1.27
CCDC178-204ENST00000403303 DMRT2Q9Y5R5 561 aa7.14□□□□□ -1.27
CCDC178-204ENST00000403303 SUPT5HO00267 1087 aaKnown RBP7.08□□□□□ -1.28
CCDC178-204ENST00000403303 TSHZ2Q9NRE2 1034 aa7.08□□□□□ -1.28
CCDC178-204ENST00000403303 SCAF1Q9H7N4 1312 aaKnown RBP7.06□□□□□ -1.28
CCDC178-204ENST00000403303 GTF3C3Q9Y5Q9 886 aa7.03□□□□□ -1.28
CCDC178-204ENST00000403303 RNF39Q9H2S5 420 aa7.03□□□□□ -1.28
CCDC178-204ENST00000403303 NPM1P06748 294 aaKnown RBP eCLIP7.02□□□□□ -1.29
CCDC178-204ENST00000403303 DCAF8L1A6NGE4 600 aa7.01□□□□□ -1.29
CCDC178-204ENST00000403303 C1QBPQ07021 282 aaKnown RBP7.01□□□□□ -1.29
CCDC178-204ENST00000403303 IFNLR1Q8IU57 520 aaPredicted RBP7.01□□□□□ -1.29
CCDC178-204ENST00000403303 PKD2Q13563 968 aa7.01□□□□□ -1.29
CCDC178-204ENST00000403303 MYCNP04198 464 aaPredicted RBP6.99□□□□□ -1.29
CCDC178-204ENST00000403303 PODXL2Q9NZ53 605 aa6.99□□□□□ -1.29
CCDC178-204ENST00000403303 C14orf37Q86TY3 774 aa6.98□□□□□ -1.29
CCDC178-204ENST00000403303 VSIG10Q8N0Z9 540 aa6.97□□□□□ -1.29
CCDC178-204ENST00000403303 VASPP50552 380 aaPredicted RBP6.97□□□□□ -1.29
CCDC178-204ENST00000403303 NBR1Q14596 966 aa6.96□□□□□ -1.3
CCDC178-204ENST00000403303 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.93□□□□□ -1.3
CCDC178-204ENST00000403303 RNF216Q9NWF9 866 aaPredicted RBP6.92□□□□□ -1.3
CCDC178-204ENST00000403303 TRIM41Q8WV44 630 aa6.91□□□□□ -1.3
CCDC178-204ENST00000403303 KLHL34Q8N239 644 aa6.9□□□□□ -1.31
CCDC178-204ENST00000403303 RGL2O15211 777 aa6.89□□□□□ -1.31
CCDC178-204ENST00000403303 ECM2O94769 699 aaPredicted RBP6.89□□□□□ -1.31
CCDC178-204ENST00000403303 CHGAP10645 457 aaKnown RBP6.89□□□□□ -1.31
CCDC178-204ENST00000403303 ARXQ96QS3 562 aa6.89□□□□□ -1.31
CCDC178-204ENST00000403303 SPDYE4A6NLX3 237 aa6.88□□□□□ -1.31
CCDC178-204ENST00000403303 HOMEZQ8IX15 550 aa6.88□□□□□ -1.31
CCDC178-204ENST00000403303 ARID3AQ99856 593 aa6.87□□□□□ -1.31
CCDC178-204ENST00000403303 TMEM132AQ24JP5 1023 aa6.85□□□□□ -1.31
CCDC178-204ENST00000403303 MYO15BQ96JP2 1530 aa6.85□□□□□ -1.31
CCDC178-204ENST00000403303 TRHP20396 242 aaPredicted RBP6.84□□□□□ -1.31
CCDC178-204ENST00000403303 UBTFP17480 764 aaKnown RBP6.82□□□□□ -1.32
CCDC178-204ENST00000403303 SPRYD3Q8NCJ5 442 aa6.82□□□□□ -1.32
CCDC178-204ENST00000403303 FBXO3Q9UK99 471 aa6.81□□□□□ -1.32
CCDC178-204ENST00000403303 ATXN8OSP0DMR3 200 aa6.8□□□□□ -1.32
CCDC178-204ENST00000403303 RANGAP1P46060 587 aaPredicted RBP6.79□□□□□ -1.32
CCDC178-204ENST00000403303 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.77□□□□□ -1.33
CCDC178-204ENST00000403303 SHROOM4Q9ULL8 1493 aa6.77□□□□□ -1.33
CCDC178-204ENST00000403303 CIZ1Q9ULV3 898 aaPredicted RBP6.76□□□□□ -1.33
CCDC178-204ENST00000403303 MKRN4PQ13434 485 aaPredicted RBP6.74□□□□□ -1.33
CCDC178-204ENST00000403303 BBXQ8WY36 941 aaPredicted RBP6.74□□□□□ -1.33
CCDC178-204ENST00000403303 TRIM26Q12899 539 aaPredicted RBP6.73□□□□□ -1.33
CCDC178-204ENST00000403303 DNAJC5BQ9UF47 199 aa6.71□□□□□ -1.34
CCDC178-204ENST00000403303 HOXD11P31277 338 aaPredicted RBP6.69□□□□□ -1.34
CCDC178-204ENST00000403303 PLCD3Q8N3E9 789 aa6.68□□□□□ -1.34
CCDC178-204ENST00000403303 ZNF219Q9P2Y4 722 aaPredicted RBP6.68□□□□□ -1.34
CCDC178-204ENST00000403303 U3KPZ7 1027 aaPredicted RBP6.67□□□□□ -1.34
CCDC178-204ENST00000403303 DCAF1Q9Y4B6 1507 aa6.67□□□□□ -1.34
CCDC178-204ENST00000403303 NEUROD2Q15784 382 aa6.64□□□□□ -1.35
CCDC178-204ENST00000403303 NPM2Q86SE8 214 aaKnown RBP6.63□□□□□ -1.35
CCDC178-204ENST00000403303 ARID3CA6NKF2 412 aa6.63□□□□□ -1.35
CCDC178-204ENST00000403303 SPOCK2Q92563 424 aa6.6□□□□□ -1.35
CCDC178-204ENST00000403303 BRPF1P55201 1214 aaPredicted RBP6.58□□□□□ -1.36
CCDC178-204ENST00000403303 MIER1Q8N108 512 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms