RNA–Protein interactions for RNA: ENST00000392864.2

HCFC2P1-201, Transcript of host cell factor C2 pseudogene 1, humanhuman

BASIC

Gene HCFC2P1, Length 1,592 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2P1-201ENST00000392864 CHIC1Q5VXU3 224 aa27.64■■■□□ 2.01
HCFC2P1-201ENST00000392864 AEBP2Q6ZN18 517 aaPredicted RBP27.46■■□□□ 1.99
HCFC2P1-201ENST00000392864 PHF23Q9BUL5 403 aaPredicted RBP24.42■■□□□ 1.5
HCFC2P1-201ENST00000392864 SENP3Q9H4L4 574 aaPredicted RBP23.14■■□□□ 1.3
HCFC2P1-201ENST00000392864 PLPPR3Q6T4P5 718 aa22.84■■□□□ 1.25
HCFC2P1-201ENST00000392864 FOXD1Q16676 465 aa21.5■■□□□ 1.03
HCFC2P1-201ENST00000392864 ADRA2BP18089 450 aa21.4■■□□□ 1.02
HCFC2P1-201ENST00000392864 PPP6R1Q9UPN7 881 aa21.27■■□□□ 1
HCFC2P1-201ENST00000392864 KCNA4P22459 653 aa20.77■□□□□ 0.92
HCFC2P1-201ENST00000392864 PIAS4Q8N2W9 510 aaPredicted RBP20.41■□□□□ 0.86
HCFC2P1-201ENST00000392864 EHMT2Q96KQ7 1210 aa20.4■□□□□ 0.86
HCFC2P1-201ENST00000392864 PPP4R3CPQ6ZMV5 832 aa20.24■□□□□ 0.83
HCFC2P1-201ENST00000392864 MSH5O43196 834 aa19.96■□□□□ 0.79
HCFC2P1-201ENST00000392864 NCBP3Q53F19 620 aaKnown RBP19.95■□□□□ 0.78
HCFC2P1-201ENST00000392864 SLC4A1APQ9BWU0 796 aaKnown RBP19.93■□□□□ 0.78
HCFC2P1-201ENST00000392864 CSRNP3Q8WYN3 585 aa19.72■□□□□ 0.75
HCFC2P1-201ENST00000392864 NPM3O75607 178 aaKnown RBP19.67■□□□□ 0.74
HCFC2P1-201ENST00000392864 CNKSR2Q8WXI2 1034 aa19.47■□□□□ 0.71
HCFC2P1-201ENST00000392864 SCAF1Q9H7N4 1312 aaKnown RBP19.47■□□□□ 0.71
HCFC2P1-201ENST00000392864 ZBTB22O15209 634 aa19.12■□□□□ 0.65
HCFC2P1-201ENST00000392864 MAPK8IP2Q13387 824 aaPredicted RBP19.09■□□□□ 0.65
HCFC2P1-201ENST00000392864 DNAJC5BQ9UF47 199 aa18.89■□□□□ 0.62
HCFC2P1-201ENST00000392864 RNF216Q9NWF9 866 aaPredicted RBP18.87■□□□□ 0.61
HCFC2P1-201ENST00000392864 FOXD4L1Q9NU39 408 aa18.85■□□□□ 0.61
HCFC2P1-201ENST00000392864 POTEDQ86YR6 584 aa18.82■□□□□ 0.6
HCFC2P1-201ENST00000392864 DMRT2Q9Y5R5 561 aa18.6■□□□□ 0.57
HCFC2P1-201ENST00000392864 HOXD11P31277 338 aaPredicted RBP18.55■□□□□ 0.56
HCFC2P1-201ENST00000392864 SLC4A2P04920 1241 aa18.36■□□□□ 0.53
HCFC2P1-201ENST00000392864 MYCNP04198 464 aaPredicted RBP18.15■□□□□ 0.5
HCFC2P1-201ENST00000392864 ATXN8OSP0DMR3 200 aa18.08■□□□□ 0.49
HCFC2P1-201ENST00000392864 DCAF8L1A6NGE4 600 aa17.83■□□□□ 0.44
HCFC2P1-201ENST00000392864 FKBP8Q14318 412 aa17.8■□□□□ 0.44
HCFC2P1-201ENST00000392864 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.73■□□□□ 0.43
HCFC2P1-201ENST00000392864 RTN4Q9NQC3 1192 aaKnown RBP17.73■□□□□ 0.43
HCFC2P1-201ENST00000392864 AMER1Q5JTC6 1135 aaPredicted RBP17.72■□□□□ 0.43
HCFC2P1-201ENST00000392864 ATF5Q9Y2D1 282 aaPredicted RBP17.62■□□□□ 0.41
HCFC2P1-201ENST00000392864 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.58■□□□□ 0.41
HCFC2P1-201ENST00000392864 HNRNPUL2Q1KMD3 747 aaKnown RBP17.58■□□□□ 0.41
HCFC2P1-201ENST00000392864 SAMD1Q6SPF0 538 aaPredicted RBP17.57■□□□□ 0.4
HCFC2P1-201ENST00000392864 U3KPZ7 1027 aaPredicted RBP17.53■□□□□ 0.4
HCFC2P1-201ENST00000392864 SLC24A1O60721 1099 aa17.42■□□□□ 0.38
HCFC2P1-201ENST00000392864 ZNF219Q9P2Y4 722 aaPredicted RBP17.23■□□□□ 0.35
HCFC2P1-201ENST00000392864 APLP2Q06481 763 aa17.18■□□□□ 0.34
HCFC2P1-201ENST00000392864 RNF39Q9H2S5 420 aa17.06■□□□□ 0.32
HCFC2P1-201ENST00000392864 SPDYE4A6NLX3 237 aa16.94■□□□□ 0.3
HCFC2P1-201ENST00000392864 CACNB1Q02641 598 aaPredicted RBP16.93■□□□□ 0.3
HCFC2P1-201ENST00000392864 FBXO3Q9UK99 471 aa16.9■□□□□ 0.3
HCFC2P1-201ENST00000392864 MKRN4PQ13434 485 aaPredicted RBP16.89■□□□□ 0.29
HCFC2P1-201ENST00000392864 TRHP20396 242 aaPredicted RBP16.84■□□□□ 0.29
HCFC2P1-201ENST00000392864 C1QBPQ07021 282 aaKnown RBP16.83■□□□□ 0.28
HCFC2P1-201ENST00000392864 FBLN2P98095 1184 aa16.81■□□□□ 0.28
HCFC2P1-201ENST00000392864 SPINK5Q9NQ38 1064 aaPredicted RBP16.8■□□□□ 0.28
HCFC2P1-201ENST00000392864 POLA2Q14181 598 aa16.75■□□□□ 0.27
HCFC2P1-201ENST00000392864 PROM2Q8N271 834 aa16.73■□□□□ 0.27
HCFC2P1-201ENST00000392864 CAPN15O75808 1086 aa16.69■□□□□ 0.26
HCFC2P1-201ENST00000392864 VASPP50552 380 aaPredicted RBP16.65■□□□□ 0.26
HCFC2P1-201ENST00000392864 IFNLR1Q8IU57 520 aaPredicted RBP16.51■□□□□ 0.23
HCFC2P1-201ENST00000392864 ZBTB12Q9Y330 459 aaPredicted RBP16.49■□□□□ 0.23
HCFC2P1-201ENST00000392864 ABCB7O75027 752 aa16.47■□□□□ 0.23
HCFC2P1-201ENST00000392864 PLCB2Q00722 1185 aa16.35■□□□□ 0.21
HCFC2P1-201ENST00000392864 DCAF8L2P0C7V8 631 aa16.34■□□□□ 0.21
HCFC2P1-201ENST00000392864 PKD2Q13563 968 aa16.27■□□□□ 0.2
HCFC2P1-201ENST00000392864 ZNF692Q9BU19 519 aaPredicted RBP16.23■□□□□ 0.19
HCFC2P1-201ENST00000392864 KLHL34Q8N239 644 aa16.2■□□□□ 0.18
HCFC2P1-201ENST00000392864 DSG3P32926 999 aa16.19■□□□□ 0.18
HCFC2P1-201ENST00000392864 SPOCK2Q92563 424 aa16.15■□□□□ 0.18
HCFC2P1-201ENST00000392864 HAP1P54257 671 aaPredicted RBP16.14■□□□□ 0.17
HCFC2P1-201ENST00000392864 OSCARQ8IYS5 282 aa16.14■□□□□ 0.17
HCFC2P1-201ENST00000392864 STAG3Q9UJ98 1225 aa16.14■□□□□ 0.17
HCFC2P1-201ENST00000392864 SPDYE2BA6NHP3 402 aa16.13■□□□□ 0.17
HCFC2P1-201ENST00000392864 SPDYE6P0CI01 402 aa16.13■□□□□ 0.17
HCFC2P1-201ENST00000392864 SPDYE2Q495Y8 402 aa16.13■□□□□ 0.17
HCFC2P1-201ENST00000392864 SSUH2Q9Y2M2 353 aa16.09■□□□□ 0.17
HCFC2P1-201ENST00000392864 PLCD3Q8N3E9 789 aa16.07■□□□□ 0.16
HCFC2P1-201ENST00000392864 PABPN1Q86U42 306 aaKnown RBP eCLIP16.04■□□□□ 0.16
HCFC2P1-201ENST00000392864 ECM2O94769 699 aaPredicted RBP16.04■□□□□ 0.16
HCFC2P1-201ENST00000392864 MIER1Q8N108 512 aa15.98■□□□□ 0.15
HCFC2P1-201ENST00000392864 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.92■□□□□ 0.14
HCFC2P1-201ENST00000392864 BBXQ8WY36 941 aaPredicted RBP15.91■□□□□ 0.14
HCFC2P1-201ENST00000392864 VSIG10Q8N0Z9 540 aa15.87■□□□□ 0.13
HCFC2P1-201ENST00000392864 NPM1P06748 294 aaKnown RBP eCLIP15.86■□□□□ 0.13
HCFC2P1-201ENST00000392864 RGL2O15211 777 aa15.85■□□□□ 0.13
HCFC2P1-201ENST00000392864 PLEKHG5O94827 1062 aa15.83■□□□□ 0.13
HCFC2P1-201ENST00000392864 PAXIP1Q6ZW49 1069 aaPredicted RBP15.81■□□□□ 0.12
HCFC2P1-201ENST00000392864 BCANQ96GW7 911 aa15.79■□□□□ 0.12
HCFC2P1-201ENST00000392864 ZBTB47Q9UFB7 747 aaPredicted RBP15.79■□□□□ 0.12
HCFC2P1-201ENST00000392864 CIZ1Q9ULV3 898 aaPredicted RBP15.79■□□□□ 0.12
HCFC2P1-201ENST00000392864 CFAP44Q96MT7 982 aa15.78■□□□□ 0.12
HCFC2P1-201ENST00000392864 KDM2AQ9Y2K7 1162 aa15.67■□□□□ 0.1
HCFC2P1-201ENST00000392864 SPRYD3Q8NCJ5 442 aa15.66■□□□□ 0.1
HCFC2P1-201ENST00000392864 CHGAP10645 457 aaKnown RBP15.65■□□□□ 0.1
HCFC2P1-201ENST00000392864 TRIM41Q8WV44 630 aa15.61■□□□□ 0.09
HCFC2P1-201ENST00000392864 TAOK2Q9UL54 1235 aa15.55■□□□□ 0.08
HCFC2P1-201ENST00000392864 TSHZ2Q9NRE2 1034 aa15.54■□□□□ 0.08
HCFC2P1-201ENST00000392864 PRKCSHP14314 528 aaPredicted RBP15.53■□□□□ 0.08
HCFC2P1-201ENST00000392864 GSE1Q14687 1217 aa15.52■□□□□ 0.07
HCFC2P1-201ENST00000392864 HS6ST3Q8IZP7 471 aa15.47■□□□□ 0.07
HCFC2P1-201ENST00000392864 NUBP1P53384 320 aa15.45■□□□□ 0.06
HCFC2P1-201ENST00000392864 SPDYE1Q8NFV5 336 aaPredicted RBP15.45■□□□□ 0.06
HCFC2P1-201ENST00000392864 RNF25Q96BH1 459 aaPredicted RBP15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms