RNA–Protein interactions for RNA: ENST00000391111.1

RNU11-3P-201, Transcript of RNA, U11 small nuclear 3, pseudogene, humanhuman

BASIC

Gene RNU11-3P, Length 133 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU11-3P-201ENST00000391111 CHIC1Q5VXU3 224 aa6.96□□□□□ -1.3
RNU11-3P-201ENST00000391111 AEBP2Q6ZN18 517 aaPredicted RBP6.75□□□□□ -1.33
RNU11-3P-201ENST00000391111 PHF23Q9BUL5 403 aaPredicted RBP6.12□□□□□ -1.43
RNU11-3P-201ENST00000391111 PLPPR3Q6T4P5 718 aa5.81□□□□□ -1.48
RNU11-3P-201ENST00000391111 SENP3Q9H4L4 574 aaPredicted RBP5.74□□□□□ -1.49
RNU11-3P-201ENST00000391111 ADRA2BP18089 450 aa5.34□□□□□ -1.55
RNU11-3P-201ENST00000391111 KCNA4P22459 653 aa5.33□□□□□ -1.56
RNU11-3P-201ENST00000391111 EHMT2Q96KQ7 1210 aa5.3□□□□□ -1.56
RNU11-3P-201ENST00000391111 PPP6R1Q9UPN7 881 aa5.28□□□□□ -1.56
RNU11-3P-201ENST00000391111 FOXD1Q16676 465 aa5.25□□□□□ -1.57
RNU11-3P-201ENST00000391111 CSRNP3Q8WYN3 585 aa5.18□□□□□ -1.58
RNU11-3P-201ENST00000391111 SLC4A1APQ9BWU0 796 aaKnown RBP5.16□□□□□ -1.58
RNU11-3P-201ENST00000391111 NCBP3Q53F19 620 aaKnown RBP5.14□□□□□ -1.59
RNU11-3P-201ENST00000391111 PPP4R3CPQ6ZMV5 832 aa5.14□□□□□ -1.59
RNU11-3P-201ENST00000391111 PIAS4Q8N2W9 510 aaPredicted RBP5.01□□□□□ -1.61
RNU11-3P-201ENST00000391111 NPM3O75607 178 aaKnown RBP5□□□□□ -1.61
RNU11-3P-201ENST00000391111 CNKSR2Q8WXI2 1034 aa4.95□□□□□ -1.62
RNU11-3P-201ENST00000391111 SCAF1Q9H7N4 1312 aaKnown RBP4.94□□□□□ -1.62
RNU11-3P-201ENST00000391111 DNAJC5BQ9UF47 199 aa4.93□□□□□ -1.62
RNU11-3P-201ENST00000391111 ZBTB22O15209 634 aa4.88□□□□□ -1.63
RNU11-3P-201ENST00000391111 FOXD4L1Q9NU39 408 aa4.86□□□□□ -1.63
RNU11-3P-201ENST00000391111 SLC24A1O60721 1099 aa4.84□□□□□ -1.63
RNU11-3P-201ENST00000391111 AMER1Q5JTC6 1135 aaPredicted RBP4.84□□□□□ -1.63
RNU11-3P-201ENST00000391111 RNF216Q9NWF9 866 aaPredicted RBP4.78□□□□□ -1.64
RNU11-3P-201ENST00000391111 MSH5O43196 834 aa4.76□□□□□ -1.65
RNU11-3P-201ENST00000391111 RTN4Q9NQC3 1192 aaKnown RBP4.75□□□□□ -1.65
RNU11-3P-201ENST00000391111 ATXN8OSP0DMR3 200 aa4.73□□□□□ -1.65
RNU11-3P-201ENST00000391111 MAPK8IP2Q13387 824 aaPredicted RBP4.7□□□□□ -1.66
RNU11-3P-201ENST00000391111 HOXD11P31277 338 aaPredicted RBP4.67□□□□□ -1.66
RNU11-3P-201ENST00000391111 MYCNP04198 464 aaPredicted RBP4.64□□□□□ -1.67
RNU11-3P-201ENST00000391111 SLC4A2P04920 1241 aa4.64□□□□□ -1.67
RNU11-3P-201ENST00000391111 FKBP8Q14318 412 aa4.63□□□□□ -1.67
RNU11-3P-201ENST00000391111 DMRT2Q9Y5R5 561 aa4.63□□□□□ -1.67
RNU11-3P-201ENST00000391111 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP4.5□□□□□ -1.69
RNU11-3P-201ENST00000391111 HNRNPUL2Q1KMD3 747 aaKnown RBP4.5□□□□□ -1.69
RNU11-3P-201ENST00000391111 SAMD1Q6SPF0 538 aaPredicted RBP4.48□□□□□ -1.69
RNU11-3P-201ENST00000391111 FBXO3Q9UK99 471 aa4.46□□□□□ -1.7
RNU11-3P-201ENST00000391111 PLCB2Q00722 1185 aa4.43□□□□□ -1.7
RNU11-3P-201ENST00000391111 ATF5Q9Y2D1 282 aaPredicted RBP4.43□□□□□ -1.7
RNU11-3P-201ENST00000391111 GRWD1Q9BQ67 446 aaKnown RBP eCLIP4.42□□□□□ -1.7
RNU11-3P-201ENST00000391111 APLP2Q06481 763 aa4.39□□□□□ -1.71
RNU11-3P-201ENST00000391111 ZNF219Q9P2Y4 722 aaPredicted RBP4.37□□□□□ -1.71
RNU11-3P-201ENST00000391111 VSIG10Q8N0Z9 540 aa4.36□□□□□ -1.71
RNU11-3P-201ENST00000391111 PROM2Q8N271 834 aa4.36□□□□□ -1.71
RNU11-3P-201ENST00000391111 U3KPZ7 1027 aaPredicted RBP4.36□□□□□ -1.71
RNU11-3P-201ENST00000391111 SPDYE4A6NLX3 237 aa4.35□□□□□ -1.71
RNU11-3P-201ENST00000391111 BCANQ96GW7 911 aa4.35□□□□□ -1.71
RNU11-3P-201ENST00000391111 DCAF8L1A6NGE4 600 aa4.34□□□□□ -1.71
RNU11-3P-201ENST00000391111 VASPP50552 380 aaPredicted RBP4.33□□□□□ -1.72
RNU11-3P-201ENST00000391111 HAP1P54257 671 aaPredicted RBP4.33□□□□□ -1.72
RNU11-3P-201ENST00000391111 FBLN2P98095 1184 aa4.29□□□□□ -1.72
RNU11-3P-201ENST00000391111 IFNLR1Q8IU57 520 aaPredicted RBP4.29□□□□□ -1.72
RNU11-3P-201ENST00000391111 BBXQ8WY36 941 aaPredicted RBP4.28□□□□□ -1.72
RNU11-3P-201ENST00000391111 TAOK2Q9UL54 1235 aa4.28□□□□□ -1.72
RNU11-3P-201ENST00000391111 MKRN4PQ13434 485 aaPredicted RBP4.27□□□□□ -1.73
RNU11-3P-201ENST00000391111 PKD2Q13563 968 aa4.27□□□□□ -1.73
RNU11-3P-201ENST00000391111 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.27□□□□□ -1.73
RNU11-3P-201ENST00000391111 DCAF8L2P0C7V8 631 aa4.25□□□□□ -1.73
RNU11-3P-201ENST00000391111 SPOCK2Q92563 424 aa4.22□□□□□ -1.73
RNU11-3P-201ENST00000391111 PRKCSHP14314 528 aaPredicted RBP4.21□□□□□ -1.74
RNU11-3P-201ENST00000391111 STAG3Q9UJ98 1225 aa4.21□□□□□ -1.74
RNU11-3P-201ENST00000391111 KDM2AQ9Y2K7 1162 aa4.2□□□□□ -1.74
RNU11-3P-201ENST00000391111 ZBTB12Q9Y330 459 aaPredicted RBP4.2□□□□□ -1.74
RNU11-3P-201ENST00000391111 ECM2O94769 699 aaPredicted RBP4.19□□□□□ -1.74
RNU11-3P-201ENST00000391111 PAXIP1Q6ZW49 1069 aaPredicted RBP4.19□□□□□ -1.74
RNU11-3P-201ENST00000391111 KLHL34Q8N239 644 aa4.19□□□□□ -1.74
RNU11-3P-201ENST00000391111 SPRYD3Q8NCJ5 442 aa4.19□□□□□ -1.74
RNU11-3P-201ENST00000391111 POLA2Q14181 598 aa4.18□□□□□ -1.74
RNU11-3P-201ENST00000391111 TPRNQ4KMQ1 711 aa4.17□□□□□ -1.74
RNU11-3P-201ENST00000391111 CFAP44Q96MT7 982 aa4.17□□□□□ -1.74
RNU11-3P-201ENST00000391111 NPM1P06748 294 aaKnown RBP eCLIP4.16□□□□□ -1.74
RNU11-3P-201ENST00000391111 TRHP20396 242 aaPredicted RBP4.16□□□□□ -1.74
RNU11-3P-201ENST00000391111 TRIM41Q8WV44 630 aa4.14□□□□□ -1.75
RNU11-3P-201ENST00000391111 DNAJC5Q9H3Z4 198 aa4.13□□□□□ -1.75
RNU11-3P-201ENST00000391111 ERICH6Q7L0X2 663 aa4.12□□□□□ -1.75
RNU11-3P-201ENST00000391111 PLCD3Q8N3E9 789 aa4.12□□□□□ -1.75
RNU11-3P-201ENST00000391111 SPINK5Q9NQ38 1064 aaPredicted RBP4.12□□□□□ -1.75
RNU11-3P-201ENST00000391111 TSHZ2Q9NRE2 1034 aa4.12□□□□□ -1.75
RNU11-3P-201ENST00000391111 ZBTB47Q9UFB7 747 aaPredicted RBP4.12□□□□□ -1.75
RNU11-3P-201ENST00000391111 SPDYE2BA6NHP3 402 aa4.11□□□□□ -1.75
RNU11-3P-201ENST00000391111 RGL2O15211 777 aa4.11□□□□□ -1.75
RNU11-3P-201ENST00000391111 CAPN15O75808 1086 aa4.11□□□□□ -1.75
RNU11-3P-201ENST00000391111 SPDYE6P0CI01 402 aa4.11□□□□□ -1.75
RNU11-3P-201ENST00000391111 SPDYE2Q495Y8 402 aa4.11□□□□□ -1.75
RNU11-3P-201ENST00000391111 ZNF692Q9BU19 519 aaPredicted RBP4.11□□□□□ -1.75
RNU11-3P-201ENST00000391111 PLEKHG5O94827 1062 aa4.1□□□□□ -1.75
RNU11-3P-201ENST00000391111 C1QBPQ07021 282 aaKnown RBP4.1□□□□□ -1.75
RNU11-3P-201ENST00000391111 MIER1Q8N108 512 aa4.1□□□□□ -1.75
RNU11-3P-201ENST00000391111 NBR1Q14596 966 aa4.09□□□□□ -1.75
RNU11-3P-201ENST00000391111 SSUH2Q9Y2M2 353 aa4.09□□□□□ -1.75
RNU11-3P-201ENST00000391111 CHGAP10645 457 aaKnown RBP4.08□□□□□ -1.76
RNU11-3P-201ENST00000391111 RNF39Q9H2S5 420 aa4.08□□□□□ -1.76
RNU11-3P-201ENST00000391111 HS6ST3Q8IZP7 471 aa4.06□□□□□ -1.76
RNU11-3P-201ENST00000391111 CIZ1Q9ULV3 898 aaPredicted RBP4.06□□□□□ -1.76
RNU11-3P-201ENST00000391111 GSE1Q14687 1217 aa4.05□□□□□ -1.76
RNU11-3P-201ENST00000391111 PABPN1Q86U42 306 aaKnown RBP eCLIP4.05□□□□□ -1.76
RNU11-3P-201ENST00000391111 GTF3C3Q9Y5Q9 886 aa4.03□□□□□ -1.76
RNU11-3P-201ENST00000391111 ABCB7O75027 752 aa4.01□□□□□ -1.77
RNU11-3P-201ENST00000391111 TMEM132AQ24JP5 1023 aa4.01□□□□□ -1.77
RNU11-3P-201ENST00000391111 SGIP1Q9BQI5 828 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms