RNA–Protein interactions for RNA: ENST00000391028.1

RNU6-244P-201, Transcript of RNA, U6 small nuclear 244, pseudogene, humanhuman

BASIC

Gene RNU6-244P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-244P-201ENST00000391028 CHIC1Q5VXU3 224 aa17.15■□□□□ 0.34
RNU6-244P-201ENST00000391028 AEBP2Q6ZN18 517 aaPredicted RBP16.63■□□□□ 0.25
RNU6-244P-201ENST00000391028 PHF23Q9BUL5 403 aaPredicted RBP15□□□□□ -0.01
RNU6-244P-201ENST00000391028 PLPPR3Q6T4P5 718 aa14.36□□□□□ -0.11
RNU6-244P-201ENST00000391028 SENP3Q9H4L4 574 aaPredicted RBP14.27□□□□□ -0.13
RNU6-244P-201ENST00000391028 ADRA2BP18089 450 aa13.15□□□□□ -0.3
RNU6-244P-201ENST00000391028 EHMT2Q96KQ7 1210 aa13.14□□□□□ -0.31
RNU6-244P-201ENST00000391028 KCNA4P22459 653 aa13.12□□□□□ -0.31
RNU6-244P-201ENST00000391028 FOXD1Q16676 465 aa12.98□□□□□ -0.33
RNU6-244P-201ENST00000391028 PPP6R1Q9UPN7 881 aa12.97□□□□□ -0.33
RNU6-244P-201ENST00000391028 SLC4A1APQ9BWU0 796 aaKnown RBP12.75□□□□□ -0.37
RNU6-244P-201ENST00000391028 NCBP3Q53F19 620 aaKnown RBP12.74□□□□□ -0.37
RNU6-244P-201ENST00000391028 PPP4R3CPQ6ZMV5 832 aa12.66□□□□□ -0.38
RNU6-244P-201ENST00000391028 CSRNP3Q8WYN3 585 aa12.62□□□□□ -0.39
RNU6-244P-201ENST00000391028 PIAS4Q8N2W9 510 aaPredicted RBP12.51□□□□□ -0.41
RNU6-244P-201ENST00000391028 NPM3O75607 178 aaKnown RBP12.31□□□□□ -0.44
RNU6-244P-201ENST00000391028 SCAF1Q9H7N4 1312 aaKnown RBP12.28□□□□□ -0.44
RNU6-244P-201ENST00000391028 CNKSR2Q8WXI2 1034 aa12.22□□□□□ -0.45
RNU6-244P-201ENST00000391028 DNAJC5BQ9UF47 199 aa12.01□□□□□ -0.49
RNU6-244P-201ENST00000391028 FOXD4L1Q9NU39 408 aa12□□□□□ -0.49
RNU6-244P-201ENST00000391028 ZBTB22O15209 634 aa11.99□□□□□ -0.49
RNU6-244P-201ENST00000391028 MSH5O43196 834 aa11.89□□□□□ -0.51
RNU6-244P-201ENST00000391028 SLC24A1O60721 1099 aa11.87□□□□□ -0.51
RNU6-244P-201ENST00000391028 AMER1Q5JTC6 1135 aaPredicted RBP11.87□□□□□ -0.51
RNU6-244P-201ENST00000391028 POTEDQ86YR6 584 aa11.85□□□□□ -0.51
RNU6-244P-201ENST00000391028 RNF216Q9NWF9 866 aaPredicted RBP11.8□□□□□ -0.52
RNU6-244P-201ENST00000391028 RTN4Q9NQC3 1192 aaKnown RBP11.64□□□□□ -0.55
RNU6-244P-201ENST00000391028 ATXN8OSP0DMR3 200 aa11.62□□□□□ -0.55
RNU6-244P-201ENST00000391028 MAPK8IP2Q13387 824 aaPredicted RBP11.57□□□□□ -0.56
RNU6-244P-201ENST00000391028 MYCNP04198 464 aaPredicted RBP11.5□□□□□ -0.57
RNU6-244P-201ENST00000391028 HOXD11P31277 338 aaPredicted RBP11.5□□□□□ -0.57
RNU6-244P-201ENST00000391028 DMRT2Q9Y5R5 561 aa11.45□□□□□ -0.58
RNU6-244P-201ENST00000391028 FKBP8Q14318 412 aa11.43□□□□□ -0.58
RNU6-244P-201ENST00000391028 SLC4A2P04920 1241 aa11.38□□□□□ -0.59
RNU6-244P-201ENST00000391028 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.21□□□□□ -0.61
RNU6-244P-201ENST00000391028 HNRNPUL2Q1KMD3 747 aaKnown RBP11.21□□□□□ -0.61
RNU6-244P-201ENST00000391028 SAMD1Q6SPF0 538 aaPredicted RBP11.13□□□□□ -0.63
RNU6-244P-201ENST00000391028 FBXO3Q9UK99 471 aa11.04□□□□□ -0.64
RNU6-244P-201ENST00000391028 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.02□□□□□ -0.65
RNU6-244P-201ENST00000391028 APLP2Q06481 763 aa10.99□□□□□ -0.65
RNU6-244P-201ENST00000391028 DCAF8L1A6NGE4 600 aa10.92□□□□□ -0.66
RNU6-244P-201ENST00000391028 ATF5Q9Y2D1 282 aaPredicted RBP10.88□□□□□ -0.67
RNU6-244P-201ENST00000391028 PLCB2Q00722 1185 aa10.83□□□□□ -0.68
RNU6-244P-201ENST00000391028 ZNF219Q9P2Y4 722 aaPredicted RBP10.81□□□□□ -0.68
RNU6-244P-201ENST00000391028 U3KPZ7 1027 aaPredicted RBP10.8□□□□□ -0.68
RNU6-244P-201ENST00000391028 SPDYE4A6NLX3 237 aa10.77□□□□□ -0.69
RNU6-244P-201ENST00000391028 VASPP50552 380 aaPredicted RBP10.7□□□□□ -0.7
RNU6-244P-201ENST00000391028 FBLN2P98095 1184 aa10.7□□□□□ -0.7
RNU6-244P-201ENST00000391028 BCANQ96GW7 911 aa10.7□□□□□ -0.7
RNU6-244P-201ENST00000391028 DCAF8L2P0C7V8 631 aa10.67□□□□□ -0.7
RNU6-244P-201ENST00000391028 HAP1P54257 671 aaPredicted RBP10.67□□□□□ -0.7
RNU6-244P-201ENST00000391028 PROM2Q8N271 834 aa10.65□□□□□ -0.7
RNU6-244P-201ENST00000391028 VSIG10Q8N0Z9 540 aa10.62□□□□□ -0.71
RNU6-244P-201ENST00000391028 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.56□□□□□ -0.72
RNU6-244P-201ENST00000391028 IFNLR1Q8IU57 520 aaPredicted RBP10.52□□□□□ -0.73
RNU6-244P-201ENST00000391028 ZBTB12Q9Y330 459 aaPredicted RBP10.5□□□□□ -0.73
RNU6-244P-201ENST00000391028 MKRN4PQ13434 485 aaPredicted RBP10.49□□□□□ -0.73
RNU6-244P-201ENST00000391028 BBXQ8WY36 941 aaPredicted RBP10.46□□□□□ -0.73
RNU6-244P-201ENST00000391028 PKD2Q13563 968 aa10.44□□□□□ -0.74
RNU6-244P-201ENST00000391028 SPOCK2Q92563 424 aa10.43□□□□□ -0.74
RNU6-244P-201ENST00000391028 TAOK2Q9UL54 1235 aa10.43□□□□□ -0.74
RNU6-244P-201ENST00000391028 KLHL34Q8N239 644 aa10.42□□□□□ -0.74
RNU6-244P-201ENST00000391028 TRHP20396 242 aaPredicted RBP10.39□□□□□ -0.75
RNU6-244P-201ENST00000391028 STAG3Q9UJ98 1225 aa10.39□□□□□ -0.75
RNU6-244P-201ENST00000391028 POLA2Q14181 598 aa10.38□□□□□ -0.75
RNU6-244P-201ENST00000391028 ECM2O94769 699 aaPredicted RBP10.37□□□□□ -0.75
RNU6-244P-201ENST00000391028 PAXIP1Q6ZW49 1069 aaPredicted RBP10.31□□□□□ -0.76
RNU6-244P-201ENST00000391028 CAPN15O75808 1086 aa10.29□□□□□ -0.76
RNU6-244P-201ENST00000391028 SPRYD3Q8NCJ5 442 aa10.29□□□□□ -0.76
RNU6-244P-201ENST00000391028 CFAP44Q96MT7 982 aa10.28□□□□□ -0.76
RNU6-244P-201ENST00000391028 PLEKHG5O94827 1062 aa10.26□□□□□ -0.77
RNU6-244P-201ENST00000391028 PRKCSHP14314 528 aaPredicted RBP10.26□□□□□ -0.77
RNU6-244P-201ENST00000391028 PLCD3Q8N3E9 789 aa10.26□□□□□ -0.77
RNU6-244P-201ENST00000391028 TPRNQ4KMQ1 711 aa10.25□□□□□ -0.77
RNU6-244P-201ENST00000391028 ZBTB47Q9UFB7 747 aaPredicted RBP10.25□□□□□ -0.77
RNU6-244P-201ENST00000391028 SPINK5Q9NQ38 1064 aaPredicted RBP10.22□□□□□ -0.77
RNU6-244P-201ENST00000391028 TRIM41Q8WV44 630 aa10.21□□□□□ -0.77
RNU6-244P-201ENST00000391028 KDM2AQ9Y2K7 1162 aa10.21□□□□□ -0.77
RNU6-244P-201ENST00000391028 ZNF692Q9BU19 519 aaPredicted RBP10.19□□□□□ -0.78
RNU6-244P-201ENST00000391028 C1QBPQ07021 282 aaKnown RBP10.17□□□□□ -0.78
RNU6-244P-201ENST00000391028 MIER1Q8N108 512 aa10.17□□□□□ -0.78
RNU6-244P-201ENST00000391028 SPDYE2BA6NHP3 402 aa10.16□□□□□ -0.78
RNU6-244P-201ENST00000391028 SPDYE6P0CI01 402 aa10.16□□□□□ -0.78
RNU6-244P-201ENST00000391028 NBR1Q14596 966 aa10.16□□□□□ -0.78
RNU6-244P-201ENST00000391028 SPDYE2Q495Y8 402 aa10.16□□□□□ -0.78
RNU6-244P-201ENST00000391028 NPM1P06748 294 aaKnown RBP eCLIP10.15□□□□□ -0.78
RNU6-244P-201ENST00000391028 RNF39Q9H2S5 420 aa10.14□□□□□ -0.79
RNU6-244P-201ENST00000391028 RGL2O15211 777 aa10.12□□□□□ -0.79
RNU6-244P-201ENST00000391028 CHGAP10645 457 aaKnown RBP10.1□□□□□ -0.79
RNU6-244P-201ENST00000391028 CIZ1Q9ULV3 898 aaPredicted RBP10.1□□□□□ -0.79
RNU6-244P-201ENST00000391028 TSHZ2Q9NRE2 1034 aa10.08□□□□□ -0.8
RNU6-244P-201ENST00000391028 ERICH6Q7L0X2 663 aa10.07□□□□□ -0.8
RNU6-244P-201ENST00000391028 SSUH2Q9Y2M2 353 aa10.07□□□□□ -0.8
RNU6-244P-201ENST00000391028 ABCB7O75027 752 aa10.05□□□□□ -0.8
RNU6-244P-201ENST00000391028 PABPN1Q86U42 306 aaKnown RBP eCLIP10.03□□□□□ -0.8
RNU6-244P-201ENST00000391028 HS6ST3Q8IZP7 471 aa10.03□□□□□ -0.8
RNU6-244P-201ENST00000391028 DNAJC5Q9H3Z4 198 aa10.02□□□□□ -0.81
RNU6-244P-201ENST00000391028 GSE1Q14687 1217 aa10.01□□□□□ -0.81
RNU6-244P-201ENST00000391028 OSCARQ8IYS5 282 aa9.95□□□□□ -0.82
RNU6-244P-201ENST00000391028 RYDENQ9NUL5 291 aaKnown RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms