RNA–Protein interactions for RNA: ENST00000390499.1

TRAJ38-201, Transcript of T cell receptor alpha joining 38, humanhuman

APPRIS P1 BASIC

Gene TRAJ38, Length 62 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ38-201ENST00000390499 NISCHQ9Y2I1 1504 aa11.74□□□□□ -0.53
TRAJ38-201ENST00000390499 CCDC180Q9P1Z9 1646 aa10.17□□□□□ -0.78
TRAJ38-201ENST00000390499 ZCCHC6Q5VYS8 1495 aaKnown RBP9.95□□□□□ -0.82
TRAJ38-201ENST00000390499 DCAF1Q9Y4B6 1507 aa9.76□□□□□ -0.85
TRAJ38-201ENST00000390499 SHROOM4Q9ULL8 1493 aa9.73□□□□□ -0.85
TRAJ38-201ENST00000390499 MYO15BQ96JP2 1530 aa9.52□□□□□ -0.88
TRAJ38-201ENST00000390499 SUPT5HO00267 1087 aaKnown RBP9.52□□□□□ -0.89
TRAJ38-201ENST00000390499 DCAF8L2P0C7V8 631 aa9.48□□□□□ -0.89
TRAJ38-201ENST00000390499 ABCC9O60706 1549 aa9.41□□□□□ -0.9
TRAJ38-201ENST00000390499 NACADO15069 1562 aa9.36□□□□□ -0.91
TRAJ38-201ENST00000390499 SCRIBQ14160 1630 aa9.33□□□□□ -0.92
TRAJ38-201ENST00000390499 CHIC1Q5VXU3 224 aa9.3□□□□□ -0.92
TRAJ38-201ENST00000390499 RB1CC1Q8TDY2 1594 aa9.2□□□□□ -0.94
TRAJ38-201ENST00000390499 RSF1Q96T23 1441 aaPredicted RBP9.2□□□□□ -0.94
TRAJ38-201ENST00000390499 BAZ1AQ9NRL2 1556 aaPredicted RBP9.07□□□□□ -0.96
TRAJ38-201ENST00000390499 MROH2BQ7Z745 1585 aa9.06□□□□□ -0.96
TRAJ38-201ENST00000390499 CECR2Q9BXF3 1484 aa9.04□□□□□ -0.96
TRAJ38-201ENST00000390499 UNC13AQ9UPW8 1703 aa9.02□□□□□ -0.96
TRAJ38-201ENST00000390499 WIZO95785 1651 aa9.02□□□□□ -0.97
TRAJ38-201ENST00000390499 SMARCA4P51532 1647 aa8.98□□□□□ -0.97
TRAJ38-201ENST00000390499 TOP2AP11388 1531 aaKnown RBP8.98□□□□□ -0.97
TRAJ38-201ENST00000390499 EIF4G1Q04637 1599 aaKnown RBP8.96□□□□□ -0.97
TRAJ38-201ENST00000390499 TRIM41Q8WV44 630 aa8.95□□□□□ -0.98
TRAJ38-201ENST00000390499 HRCP23327 699 aa8.94□□□□□ -0.98
TRAJ38-201ENST00000390499 LOC105371045A0A1W2PR82 267 aa8.9□□□□□ -0.98
TRAJ38-201ENST00000390499 SMARCA2P51531 1590 aa8.88□□□□□ -0.99
TRAJ38-201ENST00000390499 PCGF6Q9BYE7 350 aa8.88□□□□□ -0.99
TRAJ38-201ENST00000390499 PEG3Q9GZU2 1588 aa8.87□□□□□ -0.99
TRAJ38-201ENST00000390499 BICRAQ9NZM4 1560 aa8.86□□□□□ -0.99
TRAJ38-201ENST00000390499 TRIM26Q12899 539 aaPredicted RBP8.85□□□□□ -0.99
TRAJ38-201ENST00000390499 CCDC88BA6NC98 1476 aa8.83□□□□□ -1
TRAJ38-201ENST00000390499 EEA1Q15075 1411 aa8.79□□□□□ -1
TRAJ38-201ENST00000390499 ABCC8Q09428 1581 aa8.75□□□□□ -1.01
TRAJ38-201ENST00000390499 FAM9AQ8IZU1 332 aaPredicted RBP8.75□□□□□ -1.01
TRAJ38-201ENST00000390499 ZEB1P37275 1124 aaPredicted RBP8.73□□□□□ -1.01
TRAJ38-201ENST00000390499 ATAD2BQ9ULI0 1458 aa8.72□□□□□ -1.01
TRAJ38-201ENST00000390499 BAZ1BQ9UIG0 1483 aaKnown RBP8.71□□□□□ -1.01
TRAJ38-201ENST00000390499 PABPN1Q86U42 306 aaKnown RBP eCLIP8.69□□□□□ -1.02
TRAJ38-201ENST00000390499 WRNQ14191 1432 aaPredicted RBP eCLIP8.68□□□□□ -1.02
TRAJ38-201ENST00000390499 HMGXB3Q12766 1538 aa8.66□□□□□ -1.02
TRAJ38-201ENST00000390499 TNIKQ9UKE5 1360 aa8.66□□□□□ -1.02
TRAJ38-201ENST00000390499 KIF21BO75037 1637 aa8.65□□□□□ -1.02
TRAJ38-201ENST00000390499 GOLGA3Q08378 1498 aa8.65□□□□□ -1.02
TRAJ38-201ENST00000390499 CEP162Q5TB80 1403 aa8.64□□□□□ -1.03
TRAJ38-201ENST00000390499 SYNJ1O43426 1573 aa8.63□□□□□ -1.03
TRAJ38-201ENST00000390499 CEP164Q9UPV0 1460 aa8.63□□□□□ -1.03
TRAJ38-201ENST00000390499 SOGA1O94964 1423 aa8.63□□□□□ -1.03
TRAJ38-201ENST00000390499 CSRNP3Q8WYN3 585 aa8.61□□□□□ -1.03
TRAJ38-201ENST00000390499 BIVM-ERCC5R4GMW8 1640 aa8.61□□□□□ -1.03
TRAJ38-201ENST00000390499 TOP2BQ02880 1626 aa8.6□□□□□ -1.03
TRAJ38-201ENST00000390499 NCAPD3P42695 1498 aa8.59□□□□□ -1.03
TRAJ38-201ENST00000390499 PPARGC1BQ86YN6 1023 aaKnown RBP8.59□□□□□ -1.03
TRAJ38-201ENST00000390499 PRDM2Q13029 1718 aa8.58□□□□□ -1.04
TRAJ38-201ENST00000390499 EHMT2Q96KQ7 1210 aa8.58□□□□□ -1.04
TRAJ38-201ENST00000390499 RUSC2Q8N2Y8 1516 aa8.56□□□□□ -1.04
TRAJ38-201ENST00000390499 ERICH3Q5RHP9 1530 aa8.54□□□□□ -1.04
TRAJ38-201ENST00000390499 UBTFP17480 764 aaKnown RBP8.52□□□□□ -1.05
TRAJ38-201ENST00000390499 CLIP1P30622 1438 aa8.5□□□□□ -1.05
TRAJ38-201ENST00000390499 VPS8Q8N3P4 1428 aa8.49□□□□□ -1.05
TRAJ38-201ENST00000390499 CFTRP13569 1480 aa8.49□□□□□ -1.05
TRAJ38-201ENST00000390499 RAPGEF2Q9Y4G8 1499 aa8.46□□□□□ -1.05
TRAJ38-201ENST00000390499 CUX1P39880 1505 aa8.46□□□□□ -1.05
TRAJ38-201ENST00000390499 PRXQ9BXM0 1461 aa8.45□□□□□ -1.06
TRAJ38-201ENST00000390499 KIF27Q86VH2 1401 aa8.44□□□□□ -1.06
TRAJ38-201ENST00000390499 CCER1Q8TC90 406 aaPredicted RBP8.43□□□□□ -1.06
TRAJ38-201ENST00000390499 APLP2Q06481 763 aa8.4□□□□□ -1.06
TRAJ38-201ENST00000390499 CADPSQ9ULU8 1353 aa8.38□□□□□ -1.07
TRAJ38-201ENST00000390499 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.38□□□□□ -1.07
TRAJ38-201ENST00000390499 CC2D2AQ9P2K1 1620 aa8.38□□□□□ -1.07
TRAJ38-201ENST00000390499 ARAP1Q96P48 1450 aa8.37□□□□□ -1.07
TRAJ38-201ENST00000390499 TTBK1Q5TCY1 1321 aaPredicted RBP8.33□□□□□ -1.08
TRAJ38-201ENST00000390499 CUX2O14529 1486 aa8.33□□□□□ -1.08
TRAJ38-201ENST00000390499 DNMBPQ6XZF7 1577 aa8.33□□□□□ -1.08
TRAJ38-201ENST00000390499 FGD5Q6ZNL6 1462 aa8.32□□□□□ -1.08
TRAJ38-201ENST00000390499 MAP3K1Q13233 1512 aa8.31□□□□□ -1.08
TRAJ38-201ENST00000390499 FANCD2Q9BXW9 1451 aa8.31□□□□□ -1.08
TRAJ38-201ENST00000390499 CUL7Q14999 1698 aa8.3□□□□□ -1.08
TRAJ38-201ENST00000390499 ARHGAP35Q9NRY4 1499 aa8.3□□□□□ -1.08
TRAJ38-201ENST00000390499 LAMC3Q9Y6N6 1575 aa8.29□□□□□ -1.08
TRAJ38-201ENST00000390499 ABCA10Q8WWZ4 1543 aa8.29□□□□□ -1.08
TRAJ38-201ENST00000390499 RRBP1Q9P2E9 1410 aaKnown RBP8.29□□□□□ -1.08
TRAJ38-201ENST00000390499 CLSPNQ9HAW4 1339 aa8.29□□□□□ -1.08
TRAJ38-201ENST00000390499 IGF1RP08069 1367 aa8.28□□□□□ -1.08
TRAJ38-201ENST00000390499 CARMIL1Q5VZK9 1371 aa8.27□□□□□ -1.09
TRAJ38-201ENST00000390499 EFCAB5A4FU69 1503 aa8.27□□□□□ -1.09
TRAJ38-201ENST00000390499 CFAP43Q8NDM7 1665 aa8.27□□□□□ -1.09
TRAJ38-201ENST00000390499 WDR97A6NE52 1622 aa8.26□□□□□ -1.09
TRAJ38-201ENST00000390499 TOPBP1Q92547 1522 aa8.26□□□□□ -1.09
TRAJ38-201ENST00000390499 CTTNBP2Q8WZ74 1663 aa8.26□□□□□ -1.09
TRAJ38-201ENST00000390499 FHAD1B1AJZ9 1412 aa8.26□□□□□ -1.09
TRAJ38-201ENST00000390499 TIAM1Q13009 1591 aa8.26□□□□□ -1.09
TRAJ38-201ENST00000390499 HNRNPUL2Q1KMD3 747 aaKnown RBP8.25□□□□□ -1.09
TRAJ38-201ENST00000390499 DIEXFQ68CQ4 756 aaKnown RBP8.24□□□□□ -1.09
TRAJ38-201ENST00000390499 ZNF316A6NFI3 1004 aaPredicted RBP8.23□□□□□ -1.09
TRAJ38-201ENST00000390499 RANGAP1P46060 587 aaPredicted RBP8.23□□□□□ -1.09
TRAJ38-201ENST00000390499 POLA1P09884 1462 aaPredicted RBP8.23□□□□□ -1.09
TRAJ38-201ENST00000390499 CCNB3Q8WWL7 1395 aa8.22□□□□□ -1.09
TRAJ38-201ENST00000390499 AQRO60306 1485 aaKnown RBP eCLIP8.21□□□□□ -1.09
TRAJ38-201ENST00000390499 PCF11O94913 1555 aaKnown RBP8.21□□□□□ -1.1
TRAJ38-201ENST00000390499 FYCO1Q9BQS8 1478 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 154.3 ms