RNA–Protein interactions for RNA: ENST00000384566.1

RNU6-140P-201, Transcript of RNA, U6 small nuclear 140, pseudogene, humanhuman

BASIC

Gene RNU6-140P, Length 108 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-140P-201ENST00000384566 CHIC1Q5VXU3 224 aa11.3□□□□□ -0.6
RNU6-140P-201ENST00000384566 AEBP2Q6ZN18 517 aaPredicted RBP11.11□□□□□ -0.63
RNU6-140P-201ENST00000384566 PHF23Q9BUL5 403 aaPredicted RBP9.97□□□□□ -0.81
RNU6-140P-201ENST00000384566 SENP3Q9H4L4 574 aaPredicted RBP9.39□□□□□ -0.91
RNU6-140P-201ENST00000384566 PLPPR3Q6T4P5 718 aa9.38□□□□□ -0.91
RNU6-140P-201ENST00000384566 ADRA2BP18089 450 aa8.73□□□□□ -1.01
RNU6-140P-201ENST00000384566 PPP6R1Q9UPN7 881 aa8.65□□□□□ -1.02
RNU6-140P-201ENST00000384566 FOXD1Q16676 465 aa8.64□□□□□ -1.03
RNU6-140P-201ENST00000384566 KCNA4P22459 653 aa8.59□□□□□ -1.03
RNU6-140P-201ENST00000384566 EHMT2Q96KQ7 1210 aa8.5□□□□□ -1.05
RNU6-140P-201ENST00000384566 PPP4R3CPQ6ZMV5 832 aa8.31□□□□□ -1.08
RNU6-140P-201ENST00000384566 SLC4A1APQ9BWU0 796 aaKnown RBP8.27□□□□□ -1.09
RNU6-140P-201ENST00000384566 PIAS4Q8N2W9 510 aaPredicted RBP8.26□□□□□ -1.09
RNU6-140P-201ENST00000384566 NCBP3Q53F19 620 aaKnown RBP8.24□□□□□ -1.09
RNU6-140P-201ENST00000384566 CSRNP3Q8WYN3 585 aa8.24□□□□□ -1.09
RNU6-140P-201ENST00000384566 NPM3O75607 178 aaKnown RBP8.09□□□□□ -1.11
RNU6-140P-201ENST00000384566 CNKSR2Q8WXI2 1034 aa7.99□□□□□ -1.13
RNU6-140P-201ENST00000384566 SCAF1Q9H7N4 1312 aaKnown RBP7.98□□□□□ -1.13
RNU6-140P-201ENST00000384566 ZBTB22O15209 634 aa7.9□□□□□ -1.14
RNU6-140P-201ENST00000384566 MSH5O43196 834 aa7.83□□□□□ -1.16
RNU6-140P-201ENST00000384566 DNAJC5BQ9UF47 199 aa7.82□□□□□ -1.16
RNU6-140P-201ENST00000384566 FOXD4L1Q9NU39 408 aa7.81□□□□□ -1.16
RNU6-140P-201ENST00000384566 MAPK8IP2Q13387 824 aaPredicted RBP7.73□□□□□ -1.17
RNU6-140P-201ENST00000384566 RNF216Q9NWF9 866 aaPredicted RBP7.73□□□□□ -1.17
RNU6-140P-201ENST00000384566 HOXD11P31277 338 aaPredicted RBP7.58□□□□□ -1.2
RNU6-140P-201ENST00000384566 DMRT2Q9Y5R5 561 aa7.56□□□□□ -1.2
RNU6-140P-201ENST00000384566 AMER1Q5JTC6 1135 aaPredicted RBP7.54□□□□□ -1.2
RNU6-140P-201ENST00000384566 SLC4A2P04920 1241 aa7.53□□□□□ -1.2
RNU6-140P-201ENST00000384566 ATXN8OSP0DMR3 200 aa7.51□□□□□ -1.21
RNU6-140P-201ENST00000384566 SLC24A1O60721 1099 aa7.5□□□□□ -1.21
RNU6-140P-201ENST00000384566 RTN4Q9NQC3 1192 aaKnown RBP7.5□□□□□ -1.21
RNU6-140P-201ENST00000384566 MYCNP04198 464 aaPredicted RBP7.48□□□□□ -1.21
RNU6-140P-201ENST00000384566 FKBP8Q14318 412 aa7.41□□□□□ -1.22
RNU6-140P-201ENST00000384566 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.24□□□□□ -1.25
RNU6-140P-201ENST00000384566 HNRNPUL2Q1KMD3 747 aaKnown RBP7.24□□□□□ -1.25
RNU6-140P-201ENST00000384566 SAMD1Q6SPF0 538 aaPredicted RBP7.22□□□□□ -1.25
RNU6-140P-201ENST00000384566 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.22□□□□□ -1.25
RNU6-140P-201ENST00000384566 ATF5Q9Y2D1 282 aaPredicted RBP7.21□□□□□ -1.26
RNU6-140P-201ENST00000384566 DCAF8L1A6NGE4 600 aa7.19□□□□□ -1.26
RNU6-140P-201ENST00000384566 U3KPZ7 1027 aaPredicted RBP7.14□□□□□ -1.27
RNU6-140P-201ENST00000384566 ZNF219Q9P2Y4 722 aaPredicted RBP7.07□□□□□ -1.28
RNU6-140P-201ENST00000384566 FBXO3Q9UK99 471 aa7.07□□□□□ -1.28
RNU6-140P-201ENST00000384566 APLP2Q06481 763 aa7.06□□□□□ -1.28
RNU6-140P-201ENST00000384566 SPDYE4A6NLX3 237 aa7□□□□□ -1.29
RNU6-140P-201ENST00000384566 PROM2Q8N271 834 aa6.95□□□□□ -1.3
RNU6-140P-201ENST00000384566 PLCB2Q00722 1185 aa6.94□□□□□ -1.3
RNU6-140P-201ENST00000384566 VASPP50552 380 aaPredicted RBP6.93□□□□□ -1.3
RNU6-140P-201ENST00000384566 MKRN4PQ13434 485 aaPredicted RBP6.93□□□□□ -1.3
RNU6-140P-201ENST00000384566 FBLN2P98095 1184 aa6.92□□□□□ -1.3
RNU6-140P-201ENST00000384566 IFNLR1Q8IU57 520 aaPredicted RBP6.87□□□□□ -1.31
RNU6-140P-201ENST00000384566 TRHP20396 242 aaPredicted RBP6.84□□□□□ -1.31
RNU6-140P-201ENST00000384566 DCAF8L2P0C7V8 631 aa6.83□□□□□ -1.32
RNU6-140P-201ENST00000384566 HAP1P54257 671 aaPredicted RBP6.83□□□□□ -1.32
RNU6-140P-201ENST00000384566 POLA2Q14181 598 aa6.83□□□□□ -1.32
RNU6-140P-201ENST00000384566 PKD2Q13563 968 aa6.8□□□□□ -1.32
RNU6-140P-201ENST00000384566 SPINK5Q9NQ38 1064 aaPredicted RBP6.8□□□□□ -1.32
RNU6-140P-201ENST00000384566 CAPN15O75808 1086 aa6.77□□□□□ -1.33
RNU6-140P-201ENST00000384566 VSIG10Q8N0Z9 540 aa6.77□□□□□ -1.33
RNU6-140P-201ENST00000384566 ZBTB12Q9Y330 459 aaPredicted RBP6.77□□□□□ -1.33
RNU6-140P-201ENST00000384566 BCANQ96GW7 911 aa6.75□□□□□ -1.33
RNU6-140P-201ENST00000384566 SPOCK2Q92563 424 aa6.73□□□□□ -1.33
RNU6-140P-201ENST00000384566 RNF39Q9H2S5 420 aa6.73□□□□□ -1.33
RNU6-140P-201ENST00000384566 KLHL34Q8N239 644 aa6.72□□□□□ -1.33
RNU6-140P-201ENST00000384566 BBXQ8WY36 941 aaPredicted RBP6.71□□□□□ -1.34
RNU6-140P-201ENST00000384566 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.71□□□□□ -1.34
RNU6-140P-201ENST00000384566 C1QBPQ07021 282 aaKnown RBP6.7□□□□□ -1.34
RNU6-140P-201ENST00000384566 STAG3Q9UJ98 1225 aa6.7□□□□□ -1.34
RNU6-140P-201ENST00000384566 ECM2O94769 699 aaPredicted RBP6.69□□□□□ -1.34
RNU6-140P-201ENST00000384566 ABCB7O75027 752 aa6.66□□□□□ -1.34
RNU6-140P-201ENST00000384566 ZNF692Q9BU19 519 aaPredicted RBP6.65□□□□□ -1.34
RNU6-140P-201ENST00000384566 PAXIP1Q6ZW49 1069 aaPredicted RBP6.64□□□□□ -1.35
RNU6-140P-201ENST00000384566 PLCD3Q8N3E9 789 aa6.64□□□□□ -1.35
RNU6-140P-201ENST00000384566 TAOK2Q9UL54 1235 aa6.64□□□□□ -1.35
RNU6-140P-201ENST00000384566 NPM1P06748 294 aaKnown RBP eCLIP6.63□□□□□ -1.35
RNU6-140P-201ENST00000384566 SPDYE2BA6NHP3 402 aa6.62□□□□□ -1.35
RNU6-140P-201ENST00000384566 SPDYE6P0CI01 402 aa6.62□□□□□ -1.35
RNU6-140P-201ENST00000384566 PRKCSHP14314 528 aaPredicted RBP6.62□□□□□ -1.35
RNU6-140P-201ENST00000384566 SPDYE2Q495Y8 402 aa6.62□□□□□ -1.35
RNU6-140P-201ENST00000384566 CFAP44Q96MT7 982 aa6.62□□□□□ -1.35
RNU6-140P-201ENST00000384566 KDM2AQ9Y2K7 1162 aa6.62□□□□□ -1.35
RNU6-140P-201ENST00000384566 MIER1Q8N108 512 aa6.6□□□□□ -1.35
RNU6-140P-201ENST00000384566 SSUH2Q9Y2M2 353 aa6.6□□□□□ -1.35
RNU6-140P-201ENST00000384566 RGL2O15211 777 aa6.59□□□□□ -1.35
RNU6-140P-201ENST00000384566 SPRYD3Q8NCJ5 442 aa6.59□□□□□ -1.35
RNU6-140P-201ENST00000384566 PABPN1Q86U42 306 aaKnown RBP eCLIP6.57□□□□□ -1.36
RNU6-140P-201ENST00000384566 PLEKHG5O94827 1062 aa6.56□□□□□ -1.36
RNU6-140P-201ENST00000384566 DSG3P32926 999 aa6.56□□□□□ -1.36
RNU6-140P-201ENST00000384566 OSCARQ8IYS5 282 aa6.56□□□□□ -1.36
RNU6-140P-201ENST00000384566 ZBTB47Q9UFB7 747 aaPredicted RBP6.56□□□□□ -1.36
RNU6-140P-201ENST00000384566 TPRNQ4KMQ1 711 aa6.54□□□□□ -1.36
RNU6-140P-201ENST00000384566 CIZ1Q9ULV3 898 aaPredicted RBP6.54□□□□□ -1.36
RNU6-140P-201ENST00000384566 CHGAP10645 457 aaKnown RBP6.53□□□□□ -1.36
RNU6-140P-201ENST00000384566 TRIM41Q8WV44 630 aa6.52□□□□□ -1.37
RNU6-140P-201ENST00000384566 TSHZ2Q9NRE2 1034 aa6.52□□□□□ -1.37
RNU6-140P-201ENST00000384566 HS6ST3Q8IZP7 471 aa6.46□□□□□ -1.38
RNU6-140P-201ENST00000384566 GSE1Q14687 1217 aa6.45□□□□□ -1.38
RNU6-140P-201ENST00000384566 DNAJC5Q9H3Z4 198 aa6.45□□□□□ -1.38
RNU6-140P-201ENST00000384566 NBR1Q14596 966 aa6.44□□□□□ -1.38
RNU6-140P-201ENST00000384566 RNF25Q96BH1 459 aaPredicted RBP6.4□□□□□ -1.38
RNU6-140P-201ENST00000384566 NUBP1P53384 320 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms