RNA–Protein interactions for RNA: ENST00000384310.1

RNU6-339P-201, Transcript of RNA, U6 small nuclear 339, pseudogene, humanhuman

BASIC

Gene RNU6-339P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-339P-201ENST00000384310 CHIC1Q5VXU3 224 aa13.13□□□□□ -0.31
RNU6-339P-201ENST00000384310 AEBP2Q6ZN18 517 aaPredicted RBP12.82□□□□□ -0.36
RNU6-339P-201ENST00000384310 PHF23Q9BUL5 403 aaPredicted RBP11.58□□□□□ -0.56
RNU6-339P-201ENST00000384310 PLPPR3Q6T4P5 718 aa10.95□□□□□ -0.66
RNU6-339P-201ENST00000384310 SENP3Q9H4L4 574 aaPredicted RBP10.81□□□□□ -0.68
RNU6-339P-201ENST00000384310 EHMT2Q96KQ7 1210 aa10.3□□□□□ -0.76
RNU6-339P-201ENST00000384310 ADRA2BP18089 450 aa10.21□□□□□ -0.77
RNU6-339P-201ENST00000384310 KCNA4P22459 653 aa10.19□□□□□ -0.78
RNU6-339P-201ENST00000384310 PPP6R1Q9UPN7 881 aa10.02□□□□□ -0.81
RNU6-339P-201ENST00000384310 FOXD1Q16676 465 aa9.95□□□□□ -0.82
RNU6-339P-201ENST00000384310 SLC4A1APQ9BWU0 796 aaKnown RBP9.84□□□□□ -0.83
RNU6-339P-201ENST00000384310 CSRNP3Q8WYN3 585 aa9.81□□□□□ -0.84
RNU6-339P-201ENST00000384310 PPP4R3CPQ6ZMV5 832 aa9.72□□□□□ -0.85
RNU6-339P-201ENST00000384310 NCBP3Q53F19 620 aaKnown RBP9.66□□□□□ -0.86
RNU6-339P-201ENST00000384310 PIAS4Q8N2W9 510 aaPredicted RBP9.57□□□□□ -0.88
RNU6-339P-201ENST00000384310 NPM3O75607 178 aaKnown RBP9.51□□□□□ -0.89
RNU6-339P-201ENST00000384310 ZBTB22O15209 634 aa9.38□□□□□ -0.91
RNU6-339P-201ENST00000384310 CNKSR2Q8WXI2 1034 aa9.31□□□□□ -0.92
RNU6-339P-201ENST00000384310 SLC24A1O60721 1099 aa9.29□□□□□ -0.92
RNU6-339P-201ENST00000384310 SCAF1Q9H7N4 1312 aaKnown RBP9.23□□□□□ -0.93
RNU6-339P-201ENST00000384310 FOXD4L1Q9NU39 408 aa9.22□□□□□ -0.93
RNU6-339P-201ENST00000384310 AMER1Q5JTC6 1135 aaPredicted RBP9.17□□□□□ -0.94
RNU6-339P-201ENST00000384310 RTN4Q9NQC3 1192 aaKnown RBP9.16□□□□□ -0.94
RNU6-339P-201ENST00000384310 DNAJC5BQ9UF47 199 aa9.07□□□□□ -0.96
RNU6-339P-201ENST00000384310 RNF216Q9NWF9 866 aaPredicted RBP8.97□□□□□ -0.97
RNU6-339P-201ENST00000384310 MSH5O43196 834 aa8.95□□□□□ -0.98
RNU6-339P-201ENST00000384310 MAPK8IP2Q13387 824 aaPredicted RBP8.95□□□□□ -0.98
RNU6-339P-201ENST00000384310 FKBP8Q14318 412 aa8.89□□□□□ -0.99
RNU6-339P-201ENST00000384310 ATXN8OSP0DMR3 200 aa8.81□□□□□ -1
RNU6-339P-201ENST00000384310 SLC4A2P04920 1241 aa8.8□□□□□ -1
RNU6-339P-201ENST00000384310 MYCNP04198 464 aaPredicted RBP8.79□□□□□ -1
RNU6-339P-201ENST00000384310 HOXD11P31277 338 aaPredicted RBP8.76□□□□□ -1.01
RNU6-339P-201ENST00000384310 DMRT2Q9Y5R5 561 aa8.72□□□□□ -1.01
RNU6-339P-201ENST00000384310 ATF5Q9Y2D1 282 aaPredicted RBP8.48□□□□□ -1.05
RNU6-339P-201ENST00000384310 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.43□□□□□ -1.06
RNU6-339P-201ENST00000384310 HNRNPUL2Q1KMD3 747 aaKnown RBP8.43□□□□□ -1.06
RNU6-339P-201ENST00000384310 PLCB2Q00722 1185 aa8.42□□□□□ -1.06
RNU6-339P-201ENST00000384310 SAMD1Q6SPF0 538 aaPredicted RBP8.42□□□□□ -1.06
RNU6-339P-201ENST00000384310 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.4□□□□□ -1.06
RNU6-339P-201ENST00000384310 FBXO3Q9UK99 471 aa8.39□□□□□ -1.07
RNU6-339P-201ENST00000384310 DCAF8L1A6NGE4 600 aa8.38□□□□□ -1.07
RNU6-339P-201ENST00000384310 HAP1P54257 671 aaPredicted RBP8.35□□□□□ -1.07
RNU6-339P-201ENST00000384310 DCAF8L2P0C7V8 631 aa8.32□□□□□ -1.08
RNU6-339P-201ENST00000384310 U3KPZ7 1027 aaPredicted RBP8.31□□□□□ -1.08
RNU6-339P-201ENST00000384310 SPDYE4A6NLX3 237 aa8.29□□□□□ -1.08
RNU6-339P-201ENST00000384310 BCANQ96GW7 911 aa8.28□□□□□ -1.08
RNU6-339P-201ENST00000384310 ZNF219Q9P2Y4 722 aaPredicted RBP8.28□□□□□ -1.08
RNU6-339P-201ENST00000384310 VASPP50552 380 aaPredicted RBP8.27□□□□□ -1.09
RNU6-339P-201ENST00000384310 APLP2Q06481 763 aa8.22□□□□□ -1.09
RNU6-339P-201ENST00000384310 PRKCSHP14314 528 aaPredicted RBP8.19□□□□□ -1.1
RNU6-339P-201ENST00000384310 PROM2Q8N271 834 aa8.19□□□□□ -1.1
RNU6-339P-201ENST00000384310 VSIG10Q8N0Z9 540 aa8.18□□□□□ -1.1
RNU6-339P-201ENST00000384310 TAOK2Q9UL54 1235 aa8.18□□□□□ -1.1
RNU6-339P-201ENST00000384310 IFNLR1Q8IU57 520 aaPredicted RBP8.16□□□□□ -1.1
RNU6-339P-201ENST00000384310 MKRN4PQ13434 485 aaPredicted RBP8.14□□□□□ -1.11
RNU6-339P-201ENST00000384310 FBLN2P98095 1184 aa8.13□□□□□ -1.11
RNU6-339P-201ENST00000384310 PKD2Q13563 968 aa8.13□□□□□ -1.11
RNU6-339P-201ENST00000384310 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.1□□□□□ -1.11
RNU6-339P-201ENST00000384310 TPRNQ4KMQ1 711 aa8.07□□□□□ -1.12
RNU6-339P-201ENST00000384310 BBXQ8WY36 941 aaPredicted RBP8.05□□□□□ -1.12
RNU6-339P-201ENST00000384310 ECM2O94769 699 aaPredicted RBP8.02□□□□□ -1.13
RNU6-339P-201ENST00000384310 PAXIP1Q6ZW49 1069 aaPredicted RBP8.02□□□□□ -1.13
RNU6-339P-201ENST00000384310 CFAP44Q96MT7 982 aa8.02□□□□□ -1.13
RNU6-339P-201ENST00000384310 KLHL34Q8N239 644 aa8.01□□□□□ -1.13
RNU6-339P-201ENST00000384310 KDM2AQ9Y2K7 1162 aa8.01□□□□□ -1.13
RNU6-339P-201ENST00000384310 SPOCK2Q92563 424 aa8□□□□□ -1.13
RNU6-339P-201ENST00000384310 TRHP20396 242 aaPredicted RBP7.98□□□□□ -1.13
RNU6-339P-201ENST00000384310 NPM1P06748 294 aaKnown RBP eCLIP7.96□□□□□ -1.14
RNU6-339P-201ENST00000384310 POLA2Q14181 598 aa7.95□□□□□ -1.14
RNU6-339P-201ENST00000384310 SPRYD3Q8NCJ5 442 aa7.91□□□□□ -1.14
RNU6-339P-201ENST00000384310 ZBTB12Q9Y330 459 aaPredicted RBP7.91□□□□□ -1.14
RNU6-339P-201ENST00000384310 RGL2O15211 777 aa7.9□□□□□ -1.14
RNU6-339P-201ENST00000384310 SPINK5Q9NQ38 1064 aaPredicted RBP7.9□□□□□ -1.14
RNU6-339P-201ENST00000384310 TSHZ2Q9NRE2 1034 aa7.89□□□□□ -1.15
RNU6-339P-201ENST00000384310 CAPN15O75808 1086 aa7.88□□□□□ -1.15
RNU6-339P-201ENST00000384310 PLCD3Q8N3E9 789 aa7.87□□□□□ -1.15
RNU6-339P-201ENST00000384310 NBR1Q14596 966 aa7.86□□□□□ -1.15
RNU6-339P-201ENST00000384310 STAG3Q9UJ98 1225 aa7.85□□□□□ -1.15
RNU6-339P-201ENST00000384310 CHGAP10645 457 aaKnown RBP7.83□□□□□ -1.16
RNU6-339P-201ENST00000384310 MIER1Q8N108 512 aa7.79□□□□□ -1.16
RNU6-339P-201ENST00000384310 CIZ1Q9ULV3 898 aaPredicted RBP7.79□□□□□ -1.16
RNU6-339P-201ENST00000384310 ABCB7O75027 752 aa7.78□□□□□ -1.16
RNU6-339P-201ENST00000384310 ZNF692Q9BU19 519 aaPredicted RBP7.78□□□□□ -1.16
RNU6-339P-201ENST00000384310 DNAJC5Q9H3Z4 198 aa7.75□□□□□ -1.17
RNU6-339P-201ENST00000384310 PLEKHG5O94827 1062 aa7.73□□□□□ -1.17
RNU6-339P-201ENST00000384310 ZBTB47Q9UFB7 747 aaPredicted RBP7.73□□□□□ -1.17
RNU6-339P-201ENST00000384310 TIMELESSQ9UNS1 1208 aa7.73□□□□□ -1.17
RNU6-339P-201ENST00000384310 TULP1O00294 542 aaPredicted RBP7.72□□□□□ -1.17
RNU6-339P-201ENST00000384310 HS6ST3Q8IZP7 471 aa7.72□□□□□ -1.17
RNU6-339P-201ENST00000384310 TRIM41Q8WV44 630 aa7.72□□□□□ -1.17
RNU6-339P-201ENST00000384310 SPDYE2BA6NHP3 402 aa7.71□□□□□ -1.18
RNU6-339P-201ENST00000384310 SPDYE6P0CI01 402 aa7.71□□□□□ -1.18
RNU6-339P-201ENST00000384310 SPDYE2Q495Y8 402 aa7.71□□□□□ -1.18
RNU6-339P-201ENST00000384310 PABPN1Q86U42 306 aaKnown RBP eCLIP7.71□□□□□ -1.18
RNU6-339P-201ENST00000384310 RNF39Q9H2S5 420 aa7.71□□□□□ -1.18
RNU6-339P-201ENST00000384310 SSUH2Q9Y2M2 353 aa7.71□□□□□ -1.18
RNU6-339P-201ENST00000384310 OSCARQ8IYS5 282 aa7.7□□□□□ -1.18
RNU6-339P-201ENST00000384310 GTF3C3Q9Y5Q9 886 aa7.66□□□□□ -1.18
RNU6-339P-201ENST00000384310 C1QBPQ07021 282 aaKnown RBP7.65□□□□□ -1.18
RNU6-339P-201ENST00000384310 ERICH6Q7L0X2 663 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms