RNA–Protein interactions for RNA: ENST00000384188.1

RNU6-439P-201, Transcript of RNA, U6 small nuclear 439, pseudogene, humanhuman

BASIC

Gene RNU6-439P, Length 106 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-439P-201ENST00000384188 CHIC1Q5VXU3 224 aa5.49□□□□□ -1.53
RNU6-439P-201ENST00000384188 AEBP2Q6ZN18 517 aaPredicted RBP5.23□□□□□ -1.57
RNU6-439P-201ENST00000384188 PHF23Q9BUL5 403 aaPredicted RBP4.71□□□□□ -1.66
RNU6-439P-201ENST00000384188 PLPPR3Q6T4P5 718 aa4.66□□□□□ -1.66
RNU6-439P-201ENST00000384188 SENP3Q9H4L4 574 aaPredicted RBP4.65□□□□□ -1.67
RNU6-439P-201ENST00000384188 EHMT2Q96KQ7 1210 aa4.24□□□□□ -1.73
RNU6-439P-201ENST00000384188 NCBP3Q53F19 620 aaKnown RBP4.19□□□□□ -1.74
RNU6-439P-201ENST00000384188 KCNA4P22459 653 aa4.17□□□□□ -1.74
RNU6-439P-201ENST00000384188 SLC4A1APQ9BWU0 796 aaKnown RBP4.13□□□□□ -1.75
RNU6-439P-201ENST00000384188 ADRA2BP18089 450 aa4.12□□□□□ -1.75
RNU6-439P-201ENST00000384188 FOXD1Q16676 465 aa4.11□□□□□ -1.75
RNU6-439P-201ENST00000384188 PPP4R3CPQ6ZMV5 832 aa4.06□□□□□ -1.76
RNU6-439P-201ENST00000384188 PIAS4Q8N2W9 510 aaPredicted RBP4.05□□□□□ -1.76
RNU6-439P-201ENST00000384188 PPP6R1Q9UPN7 881 aa4.05□□□□□ -1.76
RNU6-439P-201ENST00000384188 SCAF1Q9H7N4 1312 aaKnown RBP4.04□□□□□ -1.76
RNU6-439P-201ENST00000384188 CSRNP3Q8WYN3 585 aa4□□□□□ -1.77
RNU6-439P-201ENST00000384188 CNKSR2Q8WXI2 1034 aa3.95□□□□□ -1.78
RNU6-439P-201ENST00000384188 NPM3O75607 178 aaKnown RBP3.93□□□□□ -1.78
RNU6-439P-201ENST00000384188 AMER1Q5JTC6 1135 aaPredicted RBP3.91□□□□□ -1.78
RNU6-439P-201ENST00000384188 MSH5O43196 834 aa3.9□□□□□ -1.79
RNU6-439P-201ENST00000384188 FOXD4L1Q9NU39 408 aa3.89□□□□□ -1.79
RNU6-439P-201ENST00000384188 SLC24A1O60721 1099 aa3.88□□□□□ -1.79
RNU6-439P-201ENST00000384188 DNAJC5BQ9UF47 199 aa3.85□□□□□ -1.79
RNU6-439P-201ENST00000384188 RNF216Q9NWF9 866 aaPredicted RBP3.82□□□□□ -1.8
RNU6-439P-201ENST00000384188 ATXN8OSP0DMR3 200 aa3.78□□□□□ -1.8
RNU6-439P-201ENST00000384188 ZBTB22O15209 634 aa3.76□□□□□ -1.81
RNU6-439P-201ENST00000384188 MYCNP04198 464 aaPredicted RBP3.75□□□□□ -1.81
RNU6-439P-201ENST00000384188 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP3.74□□□□□ -1.81
RNU6-439P-201ENST00000384188 HNRNPUL2Q1KMD3 747 aaKnown RBP3.74□□□□□ -1.81
RNU6-439P-201ENST00000384188 RTN4Q9NQC3 1192 aaKnown RBP3.72□□□□□ -1.81
RNU6-439P-201ENST00000384188 APLP2Q06481 763 aa3.7□□□□□ -1.82
RNU6-439P-201ENST00000384188 FKBP8Q14318 412 aa3.7□□□□□ -1.82
RNU6-439P-201ENST00000384188 HOXD11P31277 338 aaPredicted RBP3.68□□□□□ -1.82
RNU6-439P-201ENST00000384188 DMRT2Q9Y5R5 561 aa3.68□□□□□ -1.82
RNU6-439P-201ENST00000384188 SAMD1Q6SPF0 538 aaPredicted RBP3.67□□□□□ -1.82
RNU6-439P-201ENST00000384188 FBXO3Q9UK99 471 aa3.66□□□□□ -1.82
RNU6-439P-201ENST00000384188 MAPK8IP2Q13387 824 aaPredicted RBP3.61□□□□□ -1.83
RNU6-439P-201ENST00000384188 GRWD1Q9BQ67 446 aaKnown RBP eCLIP3.6□□□□□ -1.83
RNU6-439P-201ENST00000384188 SLC4A2P04920 1241 aa3.58□□□□□ -1.84
RNU6-439P-201ENST00000384188 DCAF8L1A6NGE4 600 aa3.56□□□□□ -1.84
RNU6-439P-201ENST00000384188 DCAF8L2P0C7V8 631 aa3.54□□□□□ -1.84
RNU6-439P-201ENST00000384188 FBLN2P98095 1184 aa3.54□□□□□ -1.84
RNU6-439P-201ENST00000384188 BCANQ96GW7 911 aa3.53□□□□□ -1.84
RNU6-439P-201ENST00000384188 PLCB2Q00722 1185 aa3.52□□□□□ -1.85
RNU6-439P-201ENST00000384188 ZBTB4Q9P1Z0 1013 aaPredicted RBP3.51□□□□□ -1.85
RNU6-439P-201ENST00000384188 SPDYE4A6NLX3 237 aa3.5□□□□□ -1.85
RNU6-439P-201ENST00000384188 ZBTB12Q9Y330 459 aaPredicted RBP3.5□□□□□ -1.85
RNU6-439P-201ENST00000384188 HAP1P54257 671 aaPredicted RBP3.49□□□□□ -1.85
RNU6-439P-201ENST00000384188 VASPP50552 380 aaPredicted RBP3.48□□□□□ -1.85
RNU6-439P-201ENST00000384188 ZNF219Q9P2Y4 722 aaPredicted RBP3.48□□□□□ -1.85
RNU6-439P-201ENST00000384188 PLEKHG5O94827 1062 aa3.47□□□□□ -1.85
RNU6-439P-201ENST00000384188 VSIG10Q8N0Z9 540 aa3.46□□□□□ -1.86
RNU6-439P-201ENST00000384188 ZBTB47Q9UFB7 747 aaPredicted RBP3.44□□□□□ -1.86
RNU6-439P-201ENST00000384188 U3KPZ7 1027 aaPredicted RBP3.44□□□□□ -1.86
RNU6-439P-201ENST00000384188 ERICH6Q7L0X2 663 aa3.43□□□□□ -1.86
RNU6-439P-201ENST00000384188 KLHL34Q8N239 644 aa3.42□□□□□ -1.86
RNU6-439P-201ENST00000384188 STAG3Q9UJ98 1225 aa3.42□□□□□ -1.86
RNU6-439P-201ENST00000384188 TAOK2Q9UL54 1235 aa3.42□□□□□ -1.86
RNU6-439P-201ENST00000384188 BBXQ8WY36 941 aaPredicted RBP3.41□□□□□ -1.86
RNU6-439P-201ENST00000384188 SPOCK2Q92563 424 aa3.41□□□□□ -1.86
RNU6-439P-201ENST00000384188 NBR1Q14596 966 aa3.39□□□□□ -1.87
RNU6-439P-201ENST00000384188 PROM2Q8N271 834 aa3.39□□□□□ -1.87
RNU6-439P-201ENST00000384188 TRIM41Q8WV44 630 aa3.39□□□□□ -1.87
RNU6-439P-201ENST00000384188 ATF5Q9Y2D1 282 aaPredicted RBP3.39□□□□□ -1.87
RNU6-439P-201ENST00000384188 ECM2O94769 699 aaPredicted RBP3.38□□□□□ -1.87
RNU6-439P-201ENST00000384188 PLCD3Q8N3E9 789 aa3.38□□□□□ -1.87
RNU6-439P-201ENST00000384188 TRHP20396 242 aaPredicted RBP3.36□□□□□ -1.87
RNU6-439P-201ENST00000384188 SPRYD3Q8NCJ5 442 aa3.36□□□□□ -1.87
RNU6-439P-201ENST00000384188 CAPN15O75808 1086 aa3.35□□□□□ -1.87
RNU6-439P-201ENST00000384188 IFNLR1Q8IU57 520 aaPredicted RBP3.35□□□□□ -1.87
RNU6-439P-201ENST00000384188 RYDENQ9NUL5 291 aaKnown RBP3.35□□□□□ -1.87
RNU6-439P-201ENST00000384188 POLA2Q14181 598 aa3.34□□□□□ -1.87
RNU6-439P-201ENST00000384188 PAXIP1Q6ZW49 1069 aaPredicted RBP3.34□□□□□ -1.87
RNU6-439P-201ENST00000384188 CFAP44Q96MT7 982 aa3.34□□□□□ -1.87
RNU6-439P-201ENST00000384188 SPDYE2BA6NHP3 402 aa3.32□□□□□ -1.88
RNU6-439P-201ENST00000384188 SPDYE6P0CI01 402 aa3.32□□□□□ -1.88
RNU6-439P-201ENST00000384188 C1QBPQ07021 282 aaKnown RBP3.32□□□□□ -1.88
RNU6-439P-201ENST00000384188 PKD2Q13563 968 aa3.32□□□□□ -1.88
RNU6-439P-201ENST00000384188 SPDYE2Q495Y8 402 aa3.32□□□□□ -1.88
RNU6-439P-201ENST00000384188 TULP1O00294 542 aaPredicted RBP3.31□□□□□ -1.88
RNU6-439P-201ENST00000384188 TPRNQ4KMQ1 711 aa3.31□□□□□ -1.88
RNU6-439P-201ENST00000384188 MIER1Q8N108 512 aa3.31□□□□□ -1.88
RNU6-439P-201ENST00000384188 ZNF692Q9BU19 519 aaPredicted RBP3.31□□□□□ -1.88
RNU6-439P-201ENST00000384188 MKRN4PQ13434 485 aaPredicted RBP3.3□□□□□ -1.88
RNU6-439P-201ENST00000384188 GSE1Q14687 1217 aa3.3□□□□□ -1.88
RNU6-439P-201ENST00000384188 CIZ1Q9ULV3 898 aaPredicted RBP3.3□□□□□ -1.88
RNU6-439P-201ENST00000384188 CHGAP10645 457 aaKnown RBP3.29□□□□□ -1.88
RNU6-439P-201ENST00000384188 P3H3Q8IVL6 736 aa3.29□□□□□ -1.88
RNU6-439P-201ENST00000384188 HS6ST3Q8IZP7 471 aa3.26□□□□□ -1.89
RNU6-439P-201ENST00000384188 PABPN1Q86U42 306 aaKnown RBP eCLIP3.25□□□□□ -1.89
RNU6-439P-201ENST00000384188 FAM212AQ96EL1 285 aa3.25□□□□□ -1.89
RNU6-439P-201ENST00000384188 DAXXQ9UER7 740 aaPredicted RBP3.25□□□□□ -1.89
RNU6-439P-201ENST00000384188 RGL2O15211 777 aa3.24□□□□□ -1.89
RNU6-439P-201ENST00000384188 RNF39Q9H2S5 420 aa3.24□□□□□ -1.89
RNU6-439P-201ENST00000384188 SSUH2Q9Y2M2 353 aa3.24□□□□□ -1.89
RNU6-439P-201ENST00000384188 SPINK5Q9NQ38 1064 aaPredicted RBP3.23□□□□□ -1.89
RNU6-439P-201ENST00000384188 RIOK3O14730 519 aaKnown RBP3.22□□□□□ -1.89
RNU6-439P-201ENST00000384188 VGFO15240 615 aaPredicted RBP3.22□□□□□ -1.89
RNU6-439P-201ENST00000384188 ABCB7O75027 752 aa3.22□□□□□ -1.89
RNU6-439P-201ENST00000384188 PRKCSHP14314 528 aaPredicted RBP3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms