RNA–Protein interactions for RNA: ENST00000383991.1

RNU6-546P-201, Transcript of RNA, U6 small nuclear 546, pseudogene, humanhuman

BASIC

Gene RNU6-546P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-546P-201ENST00000383991 CHIC1Q5VXU3 224 aa8.86□□□□□ -0.99
RNU6-546P-201ENST00000383991 AEBP2Q6ZN18 517 aaPredicted RBP8.77□□□□□ -1.01
RNU6-546P-201ENST00000383991 PHF23Q9BUL5 403 aaPredicted RBP7.83□□□□□ -1.16
RNU6-546P-201ENST00000383991 SENP3Q9H4L4 574 aaPredicted RBP7.38□□□□□ -1.23
RNU6-546P-201ENST00000383991 PLPPR3Q6T4P5 718 aa7.32□□□□□ -1.24
RNU6-546P-201ENST00000383991 ADRA2BP18089 450 aa6.84□□□□□ -1.31
RNU6-546P-201ENST00000383991 FOXD1Q16676 465 aa6.82□□□□□ -1.32
RNU6-546P-201ENST00000383991 PPP6R1Q9UPN7 881 aa6.8□□□□□ -1.32
RNU6-546P-201ENST00000383991 KCNA4P22459 653 aa6.67□□□□□ -1.34
RNU6-546P-201ENST00000383991 EHMT2Q96KQ7 1210 aa6.54□□□□□ -1.36
RNU6-546P-201ENST00000383991 PPP4R3CPQ6ZMV5 832 aa6.49□□□□□ -1.37
RNU6-546P-201ENST00000383991 PIAS4Q8N2W9 510 aaPredicted RBP6.48□□□□□ -1.37
RNU6-546P-201ENST00000383991 SLC4A1APQ9BWU0 796 aaKnown RBP6.41□□□□□ -1.38
RNU6-546P-201ENST00000383991 NCBP3Q53F19 620 aaKnown RBP6.4□□□□□ -1.38
RNU6-546P-201ENST00000383991 CSRNP3Q8WYN3 585 aa6.37□□□□□ -1.39
RNU6-546P-201ENST00000383991 NPM3O75607 178 aaKnown RBP6.31□□□□□ -1.4
RNU6-546P-201ENST00000383991 CNKSR2Q8WXI2 1034 aa6.24□□□□□ -1.41
RNU6-546P-201ENST00000383991 SCAF1Q9H7N4 1312 aaKnown RBP6.23□□□□□ -1.41
RNU6-546P-201ENST00000383991 MSH5O43196 834 aa6.16□□□□□ -1.42
RNU6-546P-201ENST00000383991 ZBTB22O15209 634 aa6.15□□□□□ -1.42
RNU6-546P-201ENST00000383991 DNAJC5BQ9UF47 199 aa6.13□□□□□ -1.43
RNU6-546P-201ENST00000383991 MAPK8IP2Q13387 824 aaPredicted RBP6.09□□□□□ -1.43
RNU6-546P-201ENST00000383991 FOXD4L1Q9NU39 408 aa6.06□□□□□ -1.44
RNU6-546P-201ENST00000383991 RNF216Q9NWF9 866 aaPredicted RBP6.05□□□□□ -1.44
RNU6-546P-201ENST00000383991 HOXD11P31277 338 aaPredicted RBP5.96□□□□□ -1.46
RNU6-546P-201ENST00000383991 DMRT2Q9Y5R5 561 aa5.95□□□□□ -1.46
RNU6-546P-201ENST00000383991 SLC4A2P04920 1241 aa5.9□□□□□ -1.46
RNU6-546P-201ENST00000383991 ATXN8OSP0DMR3 200 aa5.84□□□□□ -1.47
RNU6-546P-201ENST00000383991 MYCNP04198 464 aaPredicted RBP5.82□□□□□ -1.48
RNU6-546P-201ENST00000383991 AMER1Q5JTC6 1135 aaPredicted RBP5.74□□□□□ -1.49
RNU6-546P-201ENST00000383991 RTN4Q9NQC3 1192 aaKnown RBP5.74□□□□□ -1.49
RNU6-546P-201ENST00000383991 FKBP8Q14318 412 aa5.72□□□□□ -1.49
RNU6-546P-201ENST00000383991 SLC24A1O60721 1099 aa5.67□□□□□ -1.5
RNU6-546P-201ENST00000383991 ATF5Q9Y2D1 282 aaPredicted RBP5.65□□□□□ -1.5
RNU6-546P-201ENST00000383991 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.64□□□□□ -1.51
RNU6-546P-201ENST00000383991 DCAF8L1A6NGE4 600 aa5.63□□□□□ -1.51
RNU6-546P-201ENST00000383991 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.62□□□□□ -1.51
RNU6-546P-201ENST00000383991 HNRNPUL2Q1KMD3 747 aaKnown RBP5.62□□□□□ -1.51
RNU6-546P-201ENST00000383991 SAMD1Q6SPF0 538 aaPredicted RBP5.62□□□□□ -1.51
RNU6-546P-201ENST00000383991 U3KPZ7 1027 aaPredicted RBP5.6□□□□□ -1.51
RNU6-546P-201ENST00000383991 ZNF219Q9P2Y4 722 aaPredicted RBP5.52□□□□□ -1.53
RNU6-546P-201ENST00000383991 APLP2Q06481 763 aa5.5□□□□□ -1.53
RNU6-546P-201ENST00000383991 FBXO3Q9UK99 471 aa5.44□□□□□ -1.54
RNU6-546P-201ENST00000383991 SPDYE4A6NLX3 237 aa5.43□□□□□ -1.54
RNU6-546P-201ENST00000383991 MKRN4PQ13434 485 aaPredicted RBP5.42□□□□□ -1.54
RNU6-546P-201ENST00000383991 PROM2Q8N271 834 aa5.42□□□□□ -1.54
RNU6-546P-201ENST00000383991 FBLN2P98095 1184 aa5.38□□□□□ -1.55
RNU6-546P-201ENST00000383991 VASPP50552 380 aaPredicted RBP5.35□□□□□ -1.55
RNU6-546P-201ENST00000383991 SPINK5Q9NQ38 1064 aaPredicted RBP5.35□□□□□ -1.55
RNU6-546P-201ENST00000383991 TRHP20396 242 aaPredicted RBP5.34□□□□□ -1.55
RNU6-546P-201ENST00000383991 POLA2Q14181 598 aa5.34□□□□□ -1.55
RNU6-546P-201ENST00000383991 RNF39Q9H2S5 420 aa5.32□□□□□ -1.56
RNU6-546P-201ENST00000383991 IFNLR1Q8IU57 520 aaPredicted RBP5.31□□□□□ -1.56
RNU6-546P-201ENST00000383991 CAPN15O75808 1086 aa5.29□□□□□ -1.56
RNU6-546P-201ENST00000383991 PLCB2Q00722 1185 aa5.29□□□□□ -1.56
RNU6-546P-201ENST00000383991 ZBTB12Q9Y330 459 aaPredicted RBP5.28□□□□□ -1.56
RNU6-546P-201ENST00000383991 C1QBPQ07021 282 aaKnown RBP5.27□□□□□ -1.57
RNU6-546P-201ENST00000383991 PKD2Q13563 968 aa5.25□□□□□ -1.57
RNU6-546P-201ENST00000383991 ABCB7O75027 752 aa5.23□□□□□ -1.57
RNU6-546P-201ENST00000383991 DCAF8L2P0C7V8 631 aa5.21□□□□□ -1.58
RNU6-546P-201ENST00000383991 HAP1P54257 671 aaPredicted RBP5.2□□□□□ -1.58
RNU6-546P-201ENST00000383991 SPOCK2Q92563 424 aa5.2□□□□□ -1.58
RNU6-546P-201ENST00000383991 STAG3Q9UJ98 1225 aa5.19□□□□□ -1.58
RNU6-546P-201ENST00000383991 KLHL34Q8N239 644 aa5.18□□□□□ -1.58
RNU6-546P-201ENST00000383991 ZNF692Q9BU19 519 aaPredicted RBP5.18□□□□□ -1.58
RNU6-546P-201ENST00000383991 SPDYE2BA6NHP3 402 aa5.17□□□□□ -1.58
RNU6-546P-201ENST00000383991 SPDYE6P0CI01 402 aa5.17□□□□□ -1.58
RNU6-546P-201ENST00000383991 SPDYE2Q495Y8 402 aa5.17□□□□□ -1.58
RNU6-546P-201ENST00000383991 VSIG10Q8N0Z9 540 aa5.17□□□□□ -1.58
RNU6-546P-201ENST00000383991 SSUH2Q9Y2M2 353 aa5.17□□□□□ -1.58
RNU6-546P-201ENST00000383991 DSG3P32926 999 aa5.16□□□□□ -1.58
RNU6-546P-201ENST00000383991 ECM2O94769 699 aaPredicted RBP5.15□□□□□ -1.59
RNU6-546P-201ENST00000383991 BBXQ8WY36 941 aaPredicted RBP5.15□□□□□ -1.59
RNU6-546P-201ENST00000383991 OSCARQ8IYS5 282 aa5.14□□□□□ -1.59
RNU6-546P-201ENST00000383991 NPM1P06748 294 aaKnown RBP eCLIP5.13□□□□□ -1.59
RNU6-546P-201ENST00000383991 PLCD3Q8N3E9 789 aa5.13□□□□□ -1.59
RNU6-546P-201ENST00000383991 BCANQ96GW7 911 aa5.13□□□□□ -1.59
RNU6-546P-201ENST00000383991 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.13□□□□□ -1.59
RNU6-546P-201ENST00000383991 PABPN1Q86U42 306 aaKnown RBP eCLIP5.12□□□□□ -1.59
RNU6-546P-201ENST00000383991 MIER1Q8N108 512 aa5.11□□□□□ -1.59
RNU6-546P-201ENST00000383991 RGL2O15211 777 aa5.1□□□□□ -1.59
RNU6-546P-201ENST00000383991 PAXIP1Q6ZW49 1069 aaPredicted RBP5.09□□□□□ -1.59
RNU6-546P-201ENST00000383991 POTEDQ86YR6 584 aa5.09□□□□□ -1.59
RNU6-546P-201ENST00000383991 KDM2AQ9Y2K7 1162 aa5.08□□□□□ -1.6
RNU6-546P-201ENST00000383991 CFAP44Q96MT7 982 aa5.07□□□□□ -1.6
RNU6-546P-201ENST00000383991 ZBTB47Q9UFB7 747 aaPredicted RBP5.06□□□□□ -1.6
RNU6-546P-201ENST00000383991 PLEKHG5O94827 1062 aa5.05□□□□□ -1.6
RNU6-546P-201ENST00000383991 SPRYD3Q8NCJ5 442 aa5.05□□□□□ -1.6
RNU6-546P-201ENST00000383991 TAOK2Q9UL54 1235 aa5.05□□□□□ -1.6
RNU6-546P-201ENST00000383991 PRKCSHP14314 528 aaPredicted RBP5.04□□□□□ -1.6
RNU6-546P-201ENST00000383991 TRIM41Q8WV44 630 aa5.04□□□□□ -1.6
RNU6-546P-201ENST00000383991 CIZ1Q9ULV3 898 aaPredicted RBP5.04□□□□□ -1.6
RNU6-546P-201ENST00000383991 CHGAP10645 457 aaKnown RBP5.02□□□□□ -1.61
RNU6-546P-201ENST00000383991 TSHZ2Q9NRE2 1034 aa5.02□□□□□ -1.61
RNU6-546P-201ENST00000383991 HS6ST3Q8IZP7 471 aa5□□□□□ -1.61
RNU6-546P-201ENST00000383991 GSE1Q14687 1217 aa4.99□□□□□ -1.61
RNU6-546P-201ENST00000383991 DNAJC5Q9H3Z4 198 aa4.99□□□□□ -1.61
RNU6-546P-201ENST00000383991 NUBP1P53384 320 aa4.98□□□□□ -1.61
RNU6-546P-201ENST00000383991 TPRNQ4KMQ1 711 aa4.97□□□□□ -1.61
RNU6-546P-201ENST00000383991 RNF25Q96BH1 459 aaPredicted RBP4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms