RNA–Protein interactions for RNA: ENST00000379017.7

SEC61A2-203, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

TSL 5 BASIC

Gene SEC61A2, Length 600 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-203ENST00000379017 CHIC1Q5VXU3 224 aa17.24■□□□□ 0.35
SEC61A2-203ENST00000379017 AEBP2Q6ZN18 517 aaPredicted RBP16.9■□□□□ 0.3
SEC61A2-203ENST00000379017 PHF23Q9BUL5 403 aaPredicted RBP15.25■□□□□ 0.03
SEC61A2-203ENST00000379017 PLPPR3Q6T4P5 718 aa14.33□□□□□ -0.12
SEC61A2-203ENST00000379017 SENP3Q9H4L4 574 aaPredicted RBP14.22□□□□□ -0.13
SEC61A2-203ENST00000379017 ADRA2BP18089 450 aa13.38□□□□□ -0.27
SEC61A2-203ENST00000379017 KCNA4P22459 653 aa13.25□□□□□ -0.29
SEC61A2-203ENST00000379017 EHMT2Q96KQ7 1210 aa13.2□□□□□ -0.3
SEC61A2-203ENST00000379017 PPP6R1Q9UPN7 881 aa13.2□□□□□ -0.3
SEC61A2-203ENST00000379017 FOXD1Q16676 465 aa13.11□□□□□ -0.31
SEC61A2-203ENST00000379017 CSRNP3Q8WYN3 585 aa12.77□□□□□ -0.37
SEC61A2-203ENST00000379017 SLC4A1APQ9BWU0 796 aaKnown RBP12.75□□□□□ -0.37
SEC61A2-203ENST00000379017 PPP4R3CPQ6ZMV5 832 aa12.72□□□□□ -0.37
SEC61A2-203ENST00000379017 NCBP3Q53F19 620 aaKnown RBP12.6□□□□□ -0.39
SEC61A2-203ENST00000379017 PIAS4Q8N2W9 510 aaPredicted RBP12.51□□□□□ -0.41
SEC61A2-203ENST00000379017 NPM3O75607 178 aaKnown RBP12.41□□□□□ -0.42
SEC61A2-203ENST00000379017 ZBTB22O15209 634 aa12.21□□□□□ -0.45
SEC61A2-203ENST00000379017 CNKSR2Q8WXI2 1034 aa12.2□□□□□ -0.46
SEC61A2-203ENST00000379017 SCAF1Q9H7N4 1312 aaKnown RBP12.11□□□□□ -0.47
SEC61A2-203ENST00000379017 DNAJC5BQ9UF47 199 aa12.03□□□□□ -0.48
SEC61A2-203ENST00000379017 FOXD4L1Q9NU39 408 aa11.98□□□□□ -0.49
SEC61A2-203ENST00000379017 SLC24A1O60721 1099 aa11.84□□□□□ -0.51
SEC61A2-203ENST00000379017 MSH5O43196 834 aa11.79□□□□□ -0.52
SEC61A2-203ENST00000379017 RNF216Q9NWF9 866 aaPredicted RBP11.79□□□□□ -0.52
SEC61A2-203ENST00000379017 MAPK8IP2Q13387 824 aaPredicted RBP11.77□□□□□ -0.53
SEC61A2-203ENST00000379017 AMER1Q5JTC6 1135 aaPredicted RBP11.77□□□□□ -0.53
SEC61A2-203ENST00000379017 RTN4Q9NQC3 1192 aaKnown RBP11.76□□□□□ -0.53
SEC61A2-203ENST00000379017 HOXD11P31277 338 aaPredicted RBP11.56□□□□□ -0.56
SEC61A2-203ENST00000379017 SLC4A2P04920 1241 aa11.55□□□□□ -0.56
SEC61A2-203ENST00000379017 ATXN8OSP0DMR3 200 aa11.54□□□□□ -0.56
SEC61A2-203ENST00000379017 DMRT2Q9Y5R5 561 aa11.48□□□□□ -0.57
SEC61A2-203ENST00000379017 MYCNP04198 464 aaPredicted RBP11.45□□□□□ -0.58
SEC61A2-203ENST00000379017 FKBP8Q14318 412 aa11.45□□□□□ -0.58
SEC61A2-203ENST00000379017 ATF5Q9Y2D1 282 aaPredicted RBP11.08□□□□□ -0.64
SEC61A2-203ENST00000379017 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.01□□□□□ -0.65
SEC61A2-203ENST00000379017 HNRNPUL2Q1KMD3 747 aaKnown RBP11.01□□□□□ -0.65
SEC61A2-203ENST00000379017 SAMD1Q6SPF0 538 aaPredicted RBP11.01□□□□□ -0.65
SEC61A2-203ENST00000379017 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.96□□□□□ -0.65
SEC61A2-203ENST00000379017 U3KPZ7 1027 aaPredicted RBP10.89□□□□□ -0.67
SEC61A2-203ENST00000379017 FBXO3Q9UK99 471 aa10.88□□□□□ -0.67
SEC61A2-203ENST00000379017 DCAF8L1A6NGE4 600 aa10.87□□□□□ -0.67
SEC61A2-203ENST00000379017 PLCB2Q00722 1185 aa10.83□□□□□ -0.68
SEC61A2-203ENST00000379017 ZNF219Q9P2Y4 722 aaPredicted RBP10.83□□□□□ -0.68
SEC61A2-203ENST00000379017 SPDYE4A6NLX3 237 aa10.76□□□□□ -0.69
SEC61A2-203ENST00000379017 PROM2Q8N271 834 aa10.73□□□□□ -0.69
SEC61A2-203ENST00000379017 APLP2Q06481 763 aa10.71□□□□□ -0.69
SEC61A2-203ENST00000379017 VASPP50552 380 aaPredicted RBP10.69□□□□□ -0.7
SEC61A2-203ENST00000379017 MKRN4PQ13434 485 aaPredicted RBP10.65□□□□□ -0.7
SEC61A2-203ENST00000379017 HAP1P54257 671 aaPredicted RBP10.64□□□□□ -0.71
SEC61A2-203ENST00000379017 IFNLR1Q8IU57 520 aaPredicted RBP10.62□□□□□ -0.71
SEC61A2-203ENST00000379017 BCANQ96GW7 911 aa10.6□□□□□ -0.71
SEC61A2-203ENST00000379017 VSIG10Q8N0Z9 540 aa10.57□□□□□ -0.72
SEC61A2-203ENST00000379017 DCAF8L2P0C7V8 631 aa10.56□□□□□ -0.72
SEC61A2-203ENST00000379017 FBLN2P98095 1184 aa10.56□□□□□ -0.72
SEC61A2-203ENST00000379017 PKD2Q13563 968 aa10.56□□□□□ -0.72
SEC61A2-203ENST00000379017 TAOK2Q9UL54 1235 aa10.46□□□□□ -0.73
SEC61A2-203ENST00000379017 PRKCSHP14314 528 aaPredicted RBP10.45□□□□□ -0.74
SEC61A2-203ENST00000379017 POLA2Q14181 598 aa10.42□□□□□ -0.74
SEC61A2-203ENST00000379017 BBXQ8WY36 941 aaPredicted RBP10.42□□□□□ -0.74
SEC61A2-203ENST00000379017 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.4□□□□□ -0.74
SEC61A2-203ENST00000379017 TRHP20396 242 aaPredicted RBP10.38□□□□□ -0.75
SEC61A2-203ENST00000379017 KDM2AQ9Y2K7 1162 aa10.37□□□□□ -0.75
SEC61A2-203ENST00000379017 SPOCK2Q92563 424 aa10.36□□□□□ -0.75
SEC61A2-203ENST00000379017 SPINK5Q9NQ38 1064 aaPredicted RBP10.35□□□□□ -0.75
SEC61A2-203ENST00000379017 ECM2O94769 699 aaPredicted RBP10.33□□□□□ -0.76
SEC61A2-203ENST00000379017 NPM1P06748 294 aaKnown RBP eCLIP10.32□□□□□ -0.76
SEC61A2-203ENST00000379017 KLHL34Q8N239 644 aa10.32□□□□□ -0.76
SEC61A2-203ENST00000379017 PAXIP1Q6ZW49 1069 aaPredicted RBP10.31□□□□□ -0.76
SEC61A2-203ENST00000379017 ZBTB12Q9Y330 459 aaPredicted RBP10.31□□□□□ -0.76
SEC61A2-203ENST00000379017 TPRNQ4KMQ1 711 aa10.27□□□□□ -0.77
SEC61A2-203ENST00000379017 CFAP44Q96MT7 982 aa10.26□□□□□ -0.77
SEC61A2-203ENST00000379017 STAG3Q9UJ98 1225 aa10.26□□□□□ -0.77
SEC61A2-203ENST00000379017 CAPN15O75808 1086 aa10.25□□□□□ -0.77
SEC61A2-203ENST00000379017 SPRYD3Q8NCJ5 442 aa10.22□□□□□ -0.77
SEC61A2-203ENST00000379017 RGL2O15211 777 aa10.21□□□□□ -0.77
SEC61A2-203ENST00000379017 RNF39Q9H2S5 420 aa10.19□□□□□ -0.78
SEC61A2-203ENST00000379017 PLCD3Q8N3E9 789 aa10.17□□□□□ -0.78
SEC61A2-203ENST00000379017 TSHZ2Q9NRE2 1034 aa10.17□□□□□ -0.78
SEC61A2-203ENST00000379017 ZNF692Q9BU19 519 aaPredicted RBP10.15□□□□□ -0.78
SEC61A2-203ENST00000379017 MIER1Q8N108 512 aa10.12□□□□□ -0.79
SEC61A2-203ENST00000379017 ABCB7O75027 752 aa10.11□□□□□ -0.79
SEC61A2-203ENST00000379017 C1QBPQ07021 282 aaKnown RBP10.11□□□□□ -0.79
SEC61A2-203ENST00000379017 DNAJC5Q9H3Z4 198 aa10.1□□□□□ -0.79
SEC61A2-203ENST00000379017 SSUH2Q9Y2M2 353 aa10.1□□□□□ -0.79
SEC61A2-203ENST00000379017 SPDYE2BA6NHP3 402 aa10.09□□□□□ -0.79
SEC61A2-203ENST00000379017 SPDYE6P0CI01 402 aa10.09□□□□□ -0.79
SEC61A2-203ENST00000379017 SPDYE2Q495Y8 402 aa10.09□□□□□ -0.79
SEC61A2-203ENST00000379017 CHGAP10645 457 aaKnown RBP10.08□□□□□ -0.8
SEC61A2-203ENST00000379017 PABPN1Q86U42 306 aaKnown RBP eCLIP10.04□□□□□ -0.8
SEC61A2-203ENST00000379017 TRIM41Q8WV44 630 aa10.04□□□□□ -0.8
SEC61A2-203ENST00000379017 ZBTB47Q9UFB7 747 aaPredicted RBP10.04□□□□□ -0.8
SEC61A2-203ENST00000379017 CIZ1Q9ULV3 898 aaPredicted RBP10.04□□□□□ -0.8
SEC61A2-203ENST00000379017 NBR1Q14596 966 aa10.01□□□□□ -0.81
SEC61A2-203ENST00000379017 HS6ST3Q8IZP7 471 aa10.01□□□□□ -0.81
SEC61A2-203ENST00000379017 OSCARQ8IYS5 282 aa10□□□□□ -0.81
SEC61A2-203ENST00000379017 PLEKHG5O94827 1062 aa9.99□□□□□ -0.81
SEC61A2-203ENST00000379017 DSG3P32926 999 aa9.94□□□□□ -0.82
SEC61A2-203ENST00000379017 GSE1Q14687 1217 aa9.89□□□□□ -0.83
SEC61A2-203ENST00000379017 RNF25Q96BH1 459 aaPredicted RBP9.88□□□□□ -0.83
SEC61A2-203ENST00000379017 NKX1-1Q15270 411 aaPredicted RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms