RNA–Protein interactions for RNA: ENST00000378747.7

OPTN-202, Transcript of optineurin, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene OPTN, Length 3,400 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-202ENST00000378747 NISCHQ9Y2I1 1504 aa19.04■□□□□ 0.64
OPTN-202ENST00000378747 CCDC180Q9P1Z9 1646 aa16.44■□□□□ 0.22
OPTN-202ENST00000378747 ZCCHC6Q5VYS8 1495 aaKnown RBP16.19■□□□□ 0.18
OPTN-202ENST00000378747 DCAF1Q9Y4B6 1507 aa15.91■□□□□ 0.14
OPTN-202ENST00000378747 SHROOM4Q9ULL8 1493 aa15.57■□□□□ 0.08
OPTN-202ENST00000378747 MYO15BQ96JP2 1530 aa15.49■□□□□ 0.07
OPTN-202ENST00000378747 ABCC9O60706 1549 aa15.32■□□□□ 0.04
OPTN-202ENST00000378747 SUPT5HO00267 1087 aaKnown RBP15.23■□□□□ 0.03
OPTN-202ENST00000378747 CHIC1Q5VXU3 224 aa15.2■□□□□ 0.02
OPTN-202ENST00000378747 NACADO15069 1562 aa15.02■□□□□ -0
OPTN-202ENST00000378747 RSF1Q96T23 1441 aaPredicted RBP14.98□□□□□ -0.01
OPTN-202ENST00000378747 SCRIBQ14160 1630 aa14.95□□□□□ -0.02
OPTN-202ENST00000378747 RB1CC1Q8TDY2 1594 aa14.95□□□□□ -0.02
OPTN-202ENST00000378747 DCAF8L2P0C7V8 631 aa14.82□□□□□ -0.04
OPTN-202ENST00000378747 EIF4G1Q04637 1599 aaKnown RBP14.81□□□□□ -0.04
OPTN-202ENST00000378747 HRCP23327 699 aa14.8□□□□□ -0.04
OPTN-202ENST00000378747 BAZ1AQ9NRL2 1556 aaPredicted RBP14.72□□□□□ -0.05
OPTN-202ENST00000378747 MROH2BQ7Z745 1585 aa14.7□□□□□ -0.06
OPTN-202ENST00000378747 CECR2Q9BXF3 1484 aa14.66□□□□□ -0.06
OPTN-202ENST00000378747 WIZO95785 1651 aa14.64□□□□□ -0.07
OPTN-202ENST00000378747 UNC13AQ9UPW8 1703 aa14.63□□□□□ -0.07
OPTN-202ENST00000378747 TOP2AP11388 1531 aaKnown RBP14.53□□□□□ -0.08
OPTN-202ENST00000378747 SMARCA4P51532 1647 aa14.52□□□□□ -0.09
OPTN-202ENST00000378747 LOC105371045A0A1W2PR82 267 aa14.51□□□□□ -0.09
OPTN-202ENST00000378747 PCGF6Q9BYE7 350 aa14.47□□□□□ -0.09
OPTN-202ENST00000378747 PEG3Q9GZU2 1588 aa14.47□□□□□ -0.09
OPTN-202ENST00000378747 TRIM26Q12899 539 aaPredicted RBP14.44□□□□□ -0.1
OPTN-202ENST00000378747 SMARCA2P51531 1590 aa14.43□□□□□ -0.1
OPTN-202ENST00000378747 BICRAQ9NZM4 1560 aa14.38□□□□□ -0.11
OPTN-202ENST00000378747 TRIM41Q8WV44 630 aa14.35□□□□□ -0.11
OPTN-202ENST00000378747 CCDC88BA6NC98 1476 aa14.32□□□□□ -0.12
OPTN-202ENST00000378747 WRNQ14191 1432 aaPredicted RBP eCLIP14.28□□□□□ -0.12
OPTN-202ENST00000378747 PPARGC1BQ86YN6 1023 aaKnown RBP14.21□□□□□ -0.13
OPTN-202ENST00000378747 EEA1Q15075 1411 aa14.2□□□□□ -0.14
OPTN-202ENST00000378747 ZEB1P37275 1124 aaPredicted RBP14.19□□□□□ -0.14
OPTN-202ENST00000378747 ABCC8Q09428 1581 aa14.18□□□□□ -0.14
OPTN-202ENST00000378747 KIF21BO75037 1637 aa14.11□□□□□ -0.15
OPTN-202ENST00000378747 TNIKQ9UKE5 1360 aa14.1□□□□□ -0.15
OPTN-202ENST00000378747 SYNJ1O43426 1573 aa14.05□□□□□ -0.16
OPTN-202ENST00000378747 ATAD2BQ9ULI0 1458 aa14.04□□□□□ -0.16
OPTN-202ENST00000378747 SOGA1O94964 1423 aa14.03□□□□□ -0.16
OPTN-202ENST00000378747 BIVM-ERCC5R4GMW8 1640 aa14.02□□□□□ -0.17
OPTN-202ENST00000378747 CEP162Q5TB80 1403 aa14.02□□□□□ -0.17
OPTN-202ENST00000378747 GOLGA3Q08378 1498 aa13.98□□□□□ -0.17
OPTN-202ENST00000378747 RUSC2Q8N2Y8 1516 aa13.97□□□□□ -0.17
OPTN-202ENST00000378747 TOP2BQ02880 1626 aa13.97□□□□□ -0.17
OPTN-202ENST00000378747 BAZ1BQ9UIG0 1483 aaKnown RBP13.97□□□□□ -0.17
OPTN-202ENST00000378747 FAM9AQ8IZU1 332 aaPredicted RBP13.96□□□□□ -0.18
OPTN-202ENST00000378747 HMGXB3Q12766 1538 aa13.95□□□□□ -0.18
OPTN-202ENST00000378747 CEP164Q9UPV0 1460 aa13.92□□□□□ -0.18
OPTN-202ENST00000378747 PRDM2Q13029 1718 aa13.9□□□□□ -0.18
OPTN-202ENST00000378747 CSRNP3Q8WYN3 585 aa13.87□□□□□ -0.19
OPTN-202ENST00000378747 ERICH3Q5RHP9 1530 aa13.87□□□□□ -0.19
OPTN-202ENST00000378747 NCAPD3P42695 1498 aa13.84□□□□□ -0.19
OPTN-202ENST00000378747 PRXQ9BXM0 1461 aa13.79□□□□□ -0.2
OPTN-202ENST00000378747 VPS8Q8N3P4 1428 aa13.77□□□□□ -0.2
OPTN-202ENST00000378747 DNAJC5BQ9UF47 199 aa13.74□□□□□ -0.21
OPTN-202ENST00000378747 RAPGEF2Q9Y4G8 1499 aa13.74□□□□□ -0.21
OPTN-202ENST00000378747 CLIP1P30622 1438 aa13.73□□□□□ -0.21
OPTN-202ENST00000378747 CUX1P39880 1505 aa13.72□□□□□ -0.21
OPTN-202ENST00000378747 CFTRP13569 1480 aa13.72□□□□□ -0.21
OPTN-202ENST00000378747 PABPN1Q86U42 306 aaKnown RBP eCLIP13.71□□□□□ -0.217e-9■□□□□ 10
OPTN-202ENST00000378747 ARAP1Q96P48 1450 aa13.67□□□□□ -0.22
OPTN-202ENST00000378747 EHMT2Q96KQ7 1210 aa13.66□□□□□ -0.22
OPTN-202ENST00000378747 CUX2O14529 1486 aa13.65□□□□□ -0.22
OPTN-202ENST00000378747 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.62□□□□□ -0.23
OPTN-202ENST00000378747 MAP3K1Q13233 1512 aa13.6□□□□□ -0.23
OPTN-202ENST00000378747 SCAF1Q9H7N4 1312 aaKnown RBP13.58□□□□□ -0.24
OPTN-202ENST00000378747 CCER1Q8TC90 406 aaPredicted RBP13.57□□□□□ -0.24
OPTN-202ENST00000378747 RRBP1Q9P2E9 1410 aaKnown RBP13.57□□□□□ -0.24
OPTN-202ENST00000378747 UBTFP17480 764 aaKnown RBP13.54□□□□□ -0.24
OPTN-202ENST00000378747 KIF27Q86VH2 1401 aa13.52□□□□□ -0.24
OPTN-202ENST00000378747 CLSPNQ9HAW4 1339 aa13.52□□□□□ -0.24
OPTN-202ENST00000378747 ARHGAP35Q9NRY4 1499 aa13.5□□□□□ -0.25
OPTN-202ENST00000378747 CFAP43Q8NDM7 1665 aa13.48□□□□□ -0.25
OPTN-202ENST00000378747 ACIN1Q9UKV3 1341 aaKnown RBP13.46□□□□□ -0.25
OPTN-202ENST00000378747 WDR97A6NE52 1622 aa13.45□□□□□ -0.26
OPTN-202ENST00000378747 DIEXFQ68CQ4 756 aaKnown RBP13.44□□□□□ -0.26
OPTN-202ENST00000378747 PELP1Q8IZL8 1130 aaKnown RBP13.44□□□□□ -0.26
OPTN-202ENST00000378747 TIAM1Q13009 1591 aa13.43□□□□□ -0.26
OPTN-202ENST00000378747 ZNF316A6NFI3 1004 aaPredicted RBP13.43□□□□□ -0.26
OPTN-202ENST00000378747 DHX57Q6P158 1386 aaKnown RBP13.41□□□□□ -0.26
OPTN-202ENST00000378747 IGF1RP08069 1367 aa13.41□□□□□ -0.26
OPTN-202ENST00000378747 CADPSQ9ULU8 1353 aa13.41□□□□□ -0.26
OPTN-202ENST00000378747 CC2D2AQ9P2K1 1620 aa13.41□□□□□ -0.26
OPTN-202ENST00000378747 DNMBPQ6XZF7 1577 aa13.39□□□□□ -0.27
OPTN-202ENST00000378747 CUL7Q14999 1698 aa13.38□□□□□ -0.27
OPTN-202ENST00000378747 NEUROD1Q13562 356 aa13.37□□□□□ -0.27
OPTN-202ENST00000378747 ABCA10Q8WWZ4 1543 aa13.37□□□□□ -0.27
OPTN-202ENST00000378747 FGD5Q6ZNL6 1462 aa13.37□□□□□ -0.27
OPTN-202ENST00000378747 AQRO60306 1485 aaKnown RBP eCLIP13.36□□□□□ -0.273e-7■■□□□ 11.5
OPTN-202ENST00000378747 CTTNBP2Q8WZ74 1663 aa13.36□□□□□ -0.27
OPTN-202ENST00000378747 EFCAB5A4FU69 1503 aa13.35□□□□□ -0.27
OPTN-202ENST00000378747 MAPKBP1O60336 1514 aa13.32□□□□□ -0.28
OPTN-202ENST00000378747 KANK4Q5T7N3 995 aaPredicted RBP13.31□□□□□ -0.28
OPTN-202ENST00000378747 LRRC9Q6ZRR7 1453 aa13.31□□□□□ -0.28
OPTN-202ENST00000378747 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.3□□□□□ -0.28
OPTN-202ENST00000378747 PCF11O94913 1555 aaKnown RBP13.3□□□□□ -0.28
OPTN-202ENST00000378747 ABCA5Q8WWZ7 1642 aa13.3□□□□□ -0.28
OPTN-202ENST00000378747 SAMD9Q5K651 1589 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms