RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 DCAF8L2P0C7V8 631 aa25.03■■□□□ 1.6
TRIM13-202ENST00000378182 EHMT2Q96KQ7 1210 aa23.32■■□□□ 1.32
TRIM13-202ENST00000378182 SUPT5HO00267 1087 aaKnown RBP23.08■■□□□ 1.29
TRIM13-202ENST00000378182 SHROOM4Q9ULL8 1493 aa22.69■■□□□ 1.22
TRIM13-202ENST00000378182 TTBK1Q5TCY1 1321 aaPredicted RBP22.42■■□□□ 1.18
TRIM13-202ENST00000378182 APLP2Q06481 763 aa22.34■■□□□ 1.17
TRIM13-202ENST00000378182 PELP1Q8IZL8 1130 aaKnown RBP22.26■■□□□ 1.15
TRIM13-202ENST00000378182 FAM9AQ8IZU1 332 aaPredicted RBP22.26■■□□□ 1.15
TRIM13-202ENST00000378182 RANGAP1P46060 587 aaPredicted RBP22.24■■□□□ 1.15
TRIM13-202ENST00000378182 ATP1B4Q9UN42 357 aaPredicted RBP22.11■■□□□ 1.13
TRIM13-202ENST00000378182 ERICH6Q7L0X2 663 aa21.77■■□□□ 1.07
TRIM13-202ENST00000378182 PCGF6Q9BYE7 350 aa21.66■■□□□ 1.06
TRIM13-202ENST00000378182 MYT1LQ9UL68 1186 aa21.55■■□□□ 1.04
TRIM13-202ENST00000378182 CHIC1Q5VXU3 224 aa21.48■■□□□ 1.03
TRIM13-202ENST00000378182 NISCHQ9Y2I1 1504 aa21.46■■□□□ 1.03
TRIM13-202ENST00000378182 CCER1Q8TC90 406 aaPredicted RBP21.35■■□□□ 1.01
TRIM13-202ENST00000378182 UBTFP17480 764 aaKnown RBP21.29■■□□□ 1
TRIM13-202ENST00000378182 POLR3GLQ9BT43 218 aa21.23■□□□□ 0.99
TRIM13-202ENST00000378182 YTHDC1Q96MU7 727 aaKnown RBP21.22■□□□□ 0.99
TRIM13-202ENST00000378182 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.18■□□□□ 0.98
TRIM13-202ENST00000378182 HNRNPUL2Q1KMD3 747 aaKnown RBP21.18■□□□□ 0.98
TRIM13-202ENST00000378182 CNGB1Q14028 1251 aaPredicted RBP21.16■□□□□ 0.98
TRIM13-202ENST00000378182 TRIM41Q8WV44 630 aa21.14■□□□□ 0.98
TRIM13-202ENST00000378182 PPARGC1BQ86YN6 1023 aaKnown RBP21.13■□□□□ 0.97
TRIM13-202ENST00000378182 SLC4A1APQ9BWU0 796 aaKnown RBP21.09■□□□□ 0.97
TRIM13-202ENST00000378182 NEFLP07196 543 aa21.07■□□□□ 0.96
TRIM13-202ENST00000378182 CENPBP07199 599 aaPredicted RBP21.06■□□□□ 0.96
TRIM13-202ENST00000378182 MYT1Q01538 1121 aa21.06■□□□□ 0.96
TRIM13-202ENST00000378182 ITGAEP38570 1179 aa20.99■□□□□ 0.95
TRIM13-202ENST00000378182 DAXXQ9UER7 740 aaPredicted RBP20.85■□□□□ 0.93
TRIM13-202ENST00000378182 ZEB1P37275 1124 aaPredicted RBP20.66■□□□□ 0.9
TRIM13-202ENST00000378182 SLC24A1O60721 1099 aa20.56■□□□□ 0.88
TRIM13-202ENST00000378182 BCL11AQ9H165 835 aa20.48■□□□□ 0.87
TRIM13-202ENST00000378182 CLSPNQ9HAW4 1339 aa20.46■□□□□ 0.87
TRIM13-202ENST00000378182 BCANQ96GW7 911 aa20.38■□□□□ 0.85
TRIM13-202ENST00000378182 ZNF316A6NFI3 1004 aaPredicted RBP20.34■□□□□ 0.85
TRIM13-202ENST00000378182 PLPPR3Q6T4P5 718 aa20.33■□□□□ 0.84
TRIM13-202ENST00000378182 FBLN2P98095 1184 aa20.25■□□□□ 0.83
TRIM13-202ENST00000378182 FAM50AQ14320 339 aaKnown RBP20.24■□□□□ 0.83
TRIM13-202ENST00000378182 TRIM52Q96A61 297 aa20.22■□□□□ 0.83
TRIM13-202ENST00000378182 ZNF326Q5BKZ1 582 aaKnown RBP20.16■□□□□ 0.82
TRIM13-202ENST00000378182 NEUROD1Q13562 356 aa20.09■□□□□ 0.81
TRIM13-202ENST00000378182 ZBTB47Q9UFB7 747 aaPredicted RBP20.09■□□□□ 0.81
TRIM13-202ENST00000378182 LOC105371045A0A1W2PR82 267 aa20.04■□□□□ 0.8
TRIM13-202ENST00000378182 TRIM26Q12899 539 aaPredicted RBP20.02■□□□□ 0.8
TRIM13-202ENST00000378182 ARID3CA6NKF2 412 aa20■□□□□ 0.79
TRIM13-202ENST00000378182 PABPN1Q86U42 306 aaKnown RBP eCLIP20■□□□□ 0.79
TRIM13-202ENST00000378182 RTL5Q5HYW3 569 aaPredicted RBP19.96■□□□□ 0.79
TRIM13-202ENST00000378182 CANXP27824 592 aaKnown RBP19.91■□□□□ 0.78
TRIM13-202ENST00000378182 HRCP23327 699 aa19.84■□□□□ 0.77
TRIM13-202ENST00000378182 ESF1Q9H501 851 aaKnown RBP19.81■□□□□ 0.76
TRIM13-202ENST00000378182 NEFMP07197 916 aa19.8■□□□□ 0.76
TRIM13-202ENST00000378182 A0A0G2JS52 829 aa19.78■□□□□ 0.76
TRIM13-202ENST00000378182 SCAF1Q9H7N4 1312 aaKnown RBP19.78■□□□□ 0.76
TRIM13-202ENST00000378182 STAG3Q9UJ98 1225 aa19.73■□□□□ 0.75
TRIM13-202ENST00000378182 PLEKHG5O94827 1062 aa19.72■□□□□ 0.75
TRIM13-202ENST00000378182 ZNF777Q9ULD5 760 aaPredicted RBP19.72■□□□□ 0.75
TRIM13-202ENST00000378182 P3H3Q8IVL6 736 aa19.72■□□□□ 0.75
TRIM13-202ENST00000378182 CHGAP10645 457 aaKnown RBP19.7■□□□□ 0.74
TRIM13-202ENST00000378182 ABCC9O60706 1549 aa19.68■□□□□ 0.74
TRIM13-202ENST00000378182 SENP3Q9H4L4 574 aaPredicted RBP19.63■□□□□ 0.73
TRIM13-202ENST00000378182 DIEXFQ68CQ4 756 aaKnown RBP19.63■□□□□ 0.73
TRIM13-202ENST00000378182 ANP32CO43423 234 aa19.58■□□□□ 0.73
TRIM13-202ENST00000378182 ZBTB7CA1YPR0 619 aa19.54■□□□□ 0.72
TRIM13-202ENST00000378182 NPM2Q86SE8 214 aaKnown RBP19.5■□□□□ 0.71
TRIM13-202ENST00000378182 CDK11AQ9UQ88 783 aaPredicted RBP19.47■□□□□ 0.71
TRIM13-202ENST00000378182 NPM1P06748 294 aaKnown RBP eCLIP19.39■□□□□ 0.69
TRIM13-202ENST00000378182 SALL2Q9Y467 1007 aaPredicted RBP19.38■□□□□ 0.69
TRIM13-202ENST00000378182 HSP90AA1P07900 732 aaKnown RBP19.38■□□□□ 0.69
TRIM13-202ENST00000378182 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.36■□□□□ 0.69
TRIM13-202ENST00000378182 C14orf37Q86TY3 774 aa19.35■□□□□ 0.69
TRIM13-202ENST00000378182 TULP1O00294 542 aaPredicted RBP19.32■□□□□ 0.68
TRIM13-202ENST00000378182 ARXQ96QS3 562 aa19.24■□□□□ 0.67
TRIM13-202ENST00000378182 HAP1P54257 671 aaPredicted RBP19.21■□□□□ 0.67
TRIM13-202ENST00000378182 ANP32AP39687 249 aaKnown RBP19.18■□□□□ 0.66
TRIM13-202ENST00000378182 ANP32BQ92688 251 aaKnown RBP19.18■□□□□ 0.66
TRIM13-202ENST00000378182 GTF3C3Q9Y5Q9 886 aa19.17■□□□□ 0.66
TRIM13-202ENST00000378182 CDK11BP21127 795 aaKnown RBP19.15■□□□□ 0.66
TRIM13-202ENST00000378182 KDM2AQ9Y2K7 1162 aa19.12■□□□□ 0.65
TRIM13-202ENST00000378182 FAM9BQ8IZU0 186 aa19.1■□□□□ 0.65
TRIM13-202ENST00000378182 ARID4BQ4LE39 1312 aaPredicted RBP19.1■□□□□ 0.65
TRIM13-202ENST00000378182 CHIC2Q9UKJ5 165 aa19.09■□□□□ 0.65
TRIM13-202ENST00000378182 UPF2Q9HAU5 1272 aaKnown RBP19.06■□□□□ 0.64
TRIM13-202ENST00000378182 EIF5BO60841 1220 aaKnown RBP19.04■□□□□ 0.64
TRIM13-202ENST00000378182 TAOK2Q9UL54 1235 aa19.04■□□□□ 0.64
TRIM13-202ENST00000378182 PPP1R15AO75807 674 aaPredicted RBP19.02■□□□□ 0.64
TRIM13-202ENST00000378182 NPHP1O15259 732 aa19.02■□□□□ 0.64
TRIM13-202ENST00000378182 NCBP3Q53F19 620 aaKnown RBP19.01■□□□□ 0.63
TRIM13-202ENST00000378182 TPRNQ4KMQ1 711 aa19■□□□□ 0.63
TRIM13-202ENST00000378182 WDR43Q15061 677 aaKnown RBP eCLIP18.97■□□□□ 0.63
TRIM13-202ENST00000378182 KCNH8Q96L42 1107 aa18.96■□□□□ 0.63
TRIM13-202ENST00000378182 LMOD2Q6P5Q4 547 aa18.95■□□□□ 0.62
TRIM13-202ENST00000378182 TONSLQ96HA7 1378 aa18.93■□□□□ 0.62
TRIM13-202ENST00000378182 HNRNPUQ00839 825 aaKnown RBP eCLIP18.92■□□□□ 0.62
TRIM13-202ENST00000378182 FKBP8Q14318 412 aa18.91■□□□□ 0.62
TRIM13-202ENST00000378182 TMC1Q8TDI8 760 aa18.9■□□□□ 0.62
TRIM13-202ENST00000378182 MYH16Q9H6N6 1097 aa18.89■□□□□ 0.62
TRIM13-202ENST00000378182 PPM1GO15355 546 aaPredicted RBP18.89■□□□□ 0.61
TRIM13-202ENST00000378182 NBR1Q14596 966 aa18.88■□□□□ 0.61
TRIM13-202ENST00000378182 CHMP7Q8WUX9 453 aaPredicted RBP18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms