RNA–Protein interactions for RNA: ENST00000372247.6

RNF220-204, Transcript of ring finger protein 220, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RNF220, Length 3,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-204ENST00000372247 NISCHQ9Y2I1 1504 aa28.77■■■□□ 2.2
RNF220-204ENST00000372247 CCDC180Q9P1Z9 1646 aa24.65■■□□□ 1.54
RNF220-204ENST00000372247 ZCCHC6Q5VYS8 1495 aaKnown RBP24.45■■□□□ 1.5
RNF220-204ENST00000372247 SHROOM4Q9ULL8 1493 aa23.95■■□□□ 1.42
RNF220-204ENST00000372247 DCAF1Q9Y4B6 1507 aa23.92■■□□□ 1.42
RNF220-204ENST00000372247 SUPT5HO00267 1087 aaKnown RBP23.54■■□□□ 1.36
RNF220-204ENST00000372247 CHIC1Q5VXU3 224 aa23.33■■□□□ 1.33
RNF220-204ENST00000372247 MYO15BQ96JP2 1530 aa23.32■■□□□ 1.32
RNF220-204ENST00000372247 ABCC9O60706 1549 aa23.12■■□□□ 1.29
RNF220-204ENST00000372247 DCAF8L2P0C7V8 631 aa22.91■■□□□ 1.26
RNF220-204ENST00000372247 HRCP23327 699 aa22.9■■□□□ 1.26
RNF220-204ENST00000372247 RSF1Q96T23 1441 aaPredicted RBP22.73■■□□□ 1.23
RNF220-204ENST00000372247 SCRIBQ14160 1630 aa22.65■■□□□ 1.22
RNF220-204ENST00000372247 RB1CC1Q8TDY2 1594 aa22.64■■□□□ 1.21
RNF220-204ENST00000372247 NACADO15069 1562 aa22.62■■□□□ 1.21
RNF220-204ENST00000372247 PCGF6Q9BYE7 350 aa22.47■■□□□ 1.19
RNF220-204ENST00000372247 LOC105371045A0A1W2PR82 267 aa22.36■■□□□ 1.17
RNF220-204ENST00000372247 TRIM26Q12899 539 aaPredicted RBP22.31■■□□□ 1.16
RNF220-204ENST00000372247 MROH2BQ7Z745 1585 aa22.25■■□□□ 1.15
RNF220-204ENST00000372247 EIF4G1Q04637 1599 aaKnown RBP22.24■■□□□ 1.15
RNF220-204ENST00000372247 BAZ1AQ9NRL2 1556 aaPredicted RBP22.22■■□□□ 1.15
RNF220-204ENST00000372247 CECR2Q9BXF3 1484 aa22.21■■□□□ 1.15
RNF220-204ENST00000372247 WIZO95785 1651 aa22.12■■□□□ 1.13
RNF220-204ENST00000372247 TRIM41Q8WV44 630 aa22.11■■□□□ 1.13
RNF220-204ENST00000372247 PPARGC1BQ86YN6 1023 aaKnown RBP22.04■■□□□ 1.12
RNF220-204ENST00000372247 ZEB1P37275 1124 aaPredicted RBP22■■□□□ 1.11
RNF220-204ENST00000372247 TOP2AP11388 1531 aaKnown RBP21.96■■□□□ 1.11
RNF220-204ENST00000372247 SMARCA4P51532 1647 aa21.89■■□□□ 1.1
RNF220-204ENST00000372247 UNC13AQ9UPW8 1703 aa21.84■■□□□ 1.09
RNF220-204ENST00000372247 SMARCA2P51531 1590 aa21.8■■□□□ 1.08
RNF220-204ENST00000372247 WRNQ14191 1432 aaPredicted RBP eCLIP21.73■■□□□ 1.07
RNF220-204ENST00000372247 CCDC88BA6NC98 1476 aa21.7■■□□□ 1.06
RNF220-204ENST00000372247 PEG3Q9GZU2 1588 aa21.7■■□□□ 1.06
RNF220-204ENST00000372247 EEA1Q15075 1411 aa21.64■■□□□ 1.05
RNF220-204ENST00000372247 FAM9AQ8IZU1 332 aaPredicted RBP21.62■■□□□ 1.05
RNF220-204ENST00000372247 ABCC8Q09428 1581 aa21.56■■□□□ 1.04
RNF220-204ENST00000372247 BICRAQ9NZM4 1560 aa21.55■■□□□ 1.04
RNF220-204ENST00000372247 TNIKQ9UKE5 1360 aa21.52■■□□□ 1.03
RNF220-204ENST00000372247 CEP162Q5TB80 1403 aa21.43■■□□□ 1.02
RNF220-204ENST00000372247 SOGA1O94964 1423 aa21.38■■□□□ 1.01
RNF220-204ENST00000372247 KIF21BO75037 1637 aa21.36■■□□□ 1.01
RNF220-204ENST00000372247 GOLGA3Q08378 1498 aa21.34■■□□□ 1.01
RNF220-204ENST00000372247 CSRNP3Q8WYN3 585 aa21.26■□□□□ 0.99
RNF220-204ENST00000372247 RUSC2Q8N2Y8 1516 aa21.26■□□□□ 0.99
RNF220-204ENST00000372247 SYNJ1O43426 1573 aa21.24■□□□□ 0.99
RNF220-204ENST00000372247 CEP164Q9UPV0 1460 aa21.22■□□□□ 0.99
RNF220-204ENST00000372247 BAZ1BQ9UIG0 1483 aaKnown RBP21.22■□□□□ 0.99
RNF220-204ENST00000372247 ATAD2BQ9ULI0 1458 aa21.22■□□□□ 0.99
RNF220-204ENST00000372247 EHMT2Q96KQ7 1210 aa21.16■□□□□ 0.98
RNF220-204ENST00000372247 BIVM-ERCC5R4GMW8 1640 aa21.11■□□□□ 0.97
RNF220-204ENST00000372247 TOP2BQ02880 1626 aa21.1■□□□□ 0.97
RNF220-204ENST00000372247 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.1■□□□□ 0.97
RNF220-204ENST00000372247 CCER1Q8TC90 406 aaPredicted RBP21.09■□□□□ 0.97
RNF220-204ENST00000372247 PELP1Q8IZL8 1130 aaKnown RBP21.07■□□□□ 0.96
RNF220-204ENST00000372247 SCAF1Q9H7N4 1312 aaKnown RBP21.06■□□□□ 0.96
RNF220-204ENST00000372247 VPS8Q8N3P4 1428 aa21.03■□□□□ 0.96
RNF220-204ENST00000372247 ERICH3Q5RHP9 1530 aa21.01■□□□□ 0.95
RNF220-204ENST00000372247 HMGXB3Q12766 1538 aa20.98■□□□□ 0.95
RNF220-204ENST00000372247 CLIP1P30622 1438 aa20.98■□□□□ 0.95
RNF220-204ENST00000372247 UBTFP17480 764 aaKnown RBP20.93■□□□□ 0.94
RNF220-204ENST00000372247 PABPN1Q86U42 306 aaKnown RBP eCLIP20.92■□□□□ 0.94
RNF220-204ENST00000372247 RAPGEF2Q9Y4G8 1499 aa20.91■□□□□ 0.94
RNF220-204ENST00000372247 PRXQ9BXM0 1461 aa20.9■□□□□ 0.94
RNF220-204ENST00000372247 ACIN1Q9UKV3 1341 aaKnown RBP20.9■□□□□ 0.94
RNF220-204ENST00000372247 NCAPD3P42695 1498 aa20.88■□□□□ 0.93
RNF220-204ENST00000372247 DIEXFQ68CQ4 756 aaKnown RBP20.86■□□□□ 0.93
RNF220-204ENST00000372247 PRDM2Q13029 1718 aa20.79■□□□□ 0.92
RNF220-204ENST00000372247 ZNF316A6NFI3 1004 aaPredicted RBP20.78■□□□□ 0.92
RNF220-204ENST00000372247 ARAP1Q96P48 1450 aa20.75■□□□□ 0.91
RNF220-204ENST00000372247 CLSPNQ9HAW4 1339 aa20.75■□□□□ 0.91
RNF220-204ENST00000372247 CUX1P39880 1505 aa20.74■□□□□ 0.91
RNF220-204ENST00000372247 NEUROD1Q13562 356 aa20.74■□□□□ 0.91
RNF220-204ENST00000372247 CFTRP13569 1480 aa20.72■□□□□ 0.91
RNF220-204ENST00000372247 CENPBP07199 599 aaPredicted RBP20.7■□□□□ 0.9
RNF220-204ENST00000372247 CUX2O14529 1486 aa20.7■□□□□ 0.9
RNF220-204ENST00000372247 RRBP1Q9P2E9 1410 aaKnown RBP20.66■□□□□ 0.9
RNF220-204ENST00000372247 KIF27Q86VH2 1401 aa20.62■□□□□ 0.89
RNF220-204ENST00000372247 MAP3K1Q13233 1512 aa20.6■□□□□ 0.89
RNF220-204ENST00000372247 TTBK1Q5TCY1 1321 aaPredicted RBP20.59■□□□□ 0.89
RNF220-204ENST00000372247 DHX57Q6P158 1386 aaKnown RBP20.54■□□□□ 0.88
RNF220-204ENST00000372247 APLP2Q06481 763 aa20.53■□□□□ 0.88
RNF220-204ENST00000372247 ARHGAP35Q9NRY4 1499 aa20.52■□□□□ 0.88
RNF220-204ENST00000372247 HNRNPUL2Q1KMD3 747 aaKnown RBP20.49■□□□□ 0.87
RNF220-204ENST00000372247 GTF3C3Q9Y5Q9 886 aa20.49■□□□□ 0.87
RNF220-204ENST00000372247 TIAM1Q13009 1591 aa20.4■□□□□ 0.86
RNF220-204ENST00000372247 KANK4Q5T7N3 995 aaPredicted RBP20.38■□□□□ 0.85
RNF220-204ENST00000372247 IGF1RP08069 1367 aa20.37■□□□□ 0.85
RNF220-204ENST00000372247 MIER1Q8N108 512 aa20.37■□□□□ 0.85
RNF220-204ENST00000372247 CFAP43Q8NDM7 1665 aa20.37■□□□□ 0.85
RNF220-204ENST00000372247 CCNB3Q8WWL7 1395 aa20.36■□□□□ 0.85
RNF220-204ENST00000372247 CADPSQ9ULU8 1353 aa20.34■□□□□ 0.85
RNF220-204ENST00000372247 FGD5Q6ZNL6 1462 aa20.28■□□□□ 0.84
RNF220-204ENST00000372247 MAPKBP1O60336 1514 aa20.27■□□□□ 0.84
RNF220-204ENST00000372247 LRRC9Q6ZRR7 1453 aa20.26■□□□□ 0.83
RNF220-204ENST00000372247 CC2D2AQ9P2K1 1620 aa20.24■□□□□ 0.83
RNF220-204ENST00000372247 AQRO60306 1485 aaKnown RBP eCLIP20.23■□□□□ 0.833e-7■■■■□ 24.8
RNF220-204ENST00000372247 EFCAB5A4FU69 1503 aa20.23■□□□□ 0.83
RNF220-204ENST00000372247 CARMIL1Q5VZK9 1371 aa20.23■□□□□ 0.83
RNF220-204ENST00000372247 FHAD1B1AJZ9 1412 aa20.23■□□□□ 0.83
RNF220-204ENST00000372247 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.22■□□□□ 0.839e-9■□□□□ 9.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms