RNA–Protein interactions for RNA: ENST00000364313.1

RNVU1-3-201, Transcript of RNA, variant U1 small nuclear 3, humanhuman

BASIC

Gene RNVU1-3, Length 161 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNVU1-3-201ENST00000364313 CHIC1Q5VXU3 224 aa13.82□□□□□ -0.2
RNVU1-3-201ENST00000364313 AEBP2Q6ZN18 517 aaPredicted RBP13.47□□□□□ -0.25
RNVU1-3-201ENST00000364313 PHF23Q9BUL5 403 aaPredicted RBP12.2□□□□□ -0.46
RNVU1-3-201ENST00000364313 PLPPR3Q6T4P5 718 aa11.49□□□□□ -0.57
RNVU1-3-201ENST00000364313 SENP3Q9H4L4 574 aaPredicted RBP11.37□□□□□ -0.59
RNVU1-3-201ENST00000364313 ADRA2BP18089 450 aa10.65□□□□□ -0.7
RNVU1-3-201ENST00000364313 KCNA4P22459 653 aa10.61□□□□□ -0.71
RNVU1-3-201ENST00000364313 EHMT2Q96KQ7 1210 aa10.52□□□□□ -0.73
RNVU1-3-201ENST00000364313 PPP6R1Q9UPN7 881 aa10.52□□□□□ -0.73
RNVU1-3-201ENST00000364313 FOXD1Q16676 465 aa10.44□□□□□ -0.74
RNVU1-3-201ENST00000364313 CSRNP3Q8WYN3 585 aa10.27□□□□□ -0.77
RNVU1-3-201ENST00000364313 SLC4A1APQ9BWU0 796 aaKnown RBP10.22□□□□□ -0.77
RNVU1-3-201ENST00000364313 PPP4R3CPQ6ZMV5 832 aa10.17□□□□□ -0.78
RNVU1-3-201ENST00000364313 NCBP3Q53F19 620 aaKnown RBP10.11□□□□□ -0.79
RNVU1-3-201ENST00000364313 NPM3O75607 178 aaKnown RBP9.94□□□□□ -0.82
RNVU1-3-201ENST00000364313 PIAS4Q8N2W9 510 aaPredicted RBP9.94□□□□□ -0.82
RNVU1-3-201ENST00000364313 DNAJC5BQ9UF47 199 aa9.82□□□□□ -0.84
RNVU1-3-201ENST00000364313 CNKSR2Q8WXI2 1034 aa9.8□□□□□ -0.84
RNVU1-3-201ENST00000364313 ZBTB22O15209 634 aa9.78□□□□□ -0.84
RNVU1-3-201ENST00000364313 SCAF1Q9H7N4 1312 aaKnown RBP9.7□□□□□ -0.86
RNVU1-3-201ENST00000364313 FOXD4L1Q9NU39 408 aa9.63□□□□□ -0.87
RNVU1-3-201ENST00000364313 SLC24A1O60721 1099 aa9.58□□□□□ -0.88
RNVU1-3-201ENST00000364313 AMER1Q5JTC6 1135 aaPredicted RBP9.54□□□□□ -0.88
RNVU1-3-201ENST00000364313 RNF216Q9NWF9 866 aaPredicted RBP9.47□□□□□ -0.89
RNVU1-3-201ENST00000364313 RTN4Q9NQC3 1192 aaKnown RBP9.46□□□□□ -0.9
RNVU1-3-201ENST00000364313 MSH5O43196 834 aa9.42□□□□□ -0.9
RNVU1-3-201ENST00000364313 ATXN8OSP0DMR3 200 aa9.34□□□□□ -0.91
RNVU1-3-201ENST00000364313 MAPK8IP2Q13387 824 aaPredicted RBP9.34□□□□□ -0.91
RNVU1-3-201ENST00000364313 HOXD11P31277 338 aaPredicted RBP9.29□□□□□ -0.92
RNVU1-3-201ENST00000364313 SLC4A2P04920 1241 aa9.26□□□□□ -0.93
RNVU1-3-201ENST00000364313 MYCNP04198 464 aaPredicted RBP9.19□□□□□ -0.94
RNVU1-3-201ENST00000364313 DMRT2Q9Y5R5 561 aa9.19□□□□□ -0.94
RNVU1-3-201ENST00000364313 FKBP8Q14318 412 aa9.16□□□□□ -0.94
RNVU1-3-201ENST00000364313 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.86□□□□□ -0.99
RNVU1-3-201ENST00000364313 HNRNPUL2Q1KMD3 747 aaKnown RBP8.86□□□□□ -0.99
RNVU1-3-201ENST00000364313 ATF5Q9Y2D1 282 aaPredicted RBP8.84□□□□□ -0.99
RNVU1-3-201ENST00000364313 SAMD1Q6SPF0 538 aaPredicted RBP8.83□□□□□ -1
RNVU1-3-201ENST00000364313 FBXO3Q9UK99 471 aa8.77□□□□□ -1.01
RNVU1-3-201ENST00000364313 PLCB2Q00722 1185 aa8.75□□□□□ -1.01
RNVU1-3-201ENST00000364313 PROM2Q8N271 834 aa8.71□□□□□ -1.02
RNVU1-3-201ENST00000364313 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.7□□□□□ -1.02
RNVU1-3-201ENST00000364313 U3KPZ7 1027 aaPredicted RBP8.7□□□□□ -1.02
RNVU1-3-201ENST00000364313 ZNF219Q9P2Y4 722 aaPredicted RBP8.65□□□□□ -1.02
RNVU1-3-201ENST00000364313 SPDYE4A6NLX3 237 aa8.61□□□□□ -1.03
RNVU1-3-201ENST00000364313 APLP2Q06481 763 aa8.61□□□□□ -1.03
RNVU1-3-201ENST00000364313 VASPP50552 380 aaPredicted RBP8.59□□□□□ -1.03
RNVU1-3-201ENST00000364313 BCANQ96GW7 911 aa8.57□□□□□ -1.04
RNVU1-3-201ENST00000364313 VSIG10Q8N0Z9 540 aa8.56□□□□□ -1.04
RNVU1-3-201ENST00000364313 DCAF8L1A6NGE4 600 aa8.54□□□□□ -1.04
RNVU1-3-201ENST00000364313 MKRN4PQ13434 485 aaPredicted RBP8.53□□□□□ -1.04
RNVU1-3-201ENST00000364313 IFNLR1Q8IU57 520 aaPredicted RBP8.52□□□□□ -1.05
RNVU1-3-201ENST00000364313 HAP1P54257 671 aaPredicted RBP8.5□□□□□ -1.05
RNVU1-3-201ENST00000364313 PKD2Q13563 968 aa8.49□□□□□ -1.05
RNVU1-3-201ENST00000364313 TAOK2Q9UL54 1235 aa8.45□□□□□ -1.06
RNVU1-3-201ENST00000364313 FBLN2P98095 1184 aa8.44□□□□□ -1.06
RNVU1-3-201ENST00000364313 BBXQ8WY36 941 aaPredicted RBP8.41□□□□□ -1.06
RNVU1-3-201ENST00000364313 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.37□□□□□ -1.07
RNVU1-3-201ENST00000364313 PRKCSHP14314 528 aaPredicted RBP8.36□□□□□ -1.07
RNVU1-3-201ENST00000364313 DCAF8L2P0C7V8 631 aa8.35□□□□□ -1.07
RNVU1-3-201ENST00000364313 KDM2AQ9Y2K7 1162 aa8.34□□□□□ -1.07
RNVU1-3-201ENST00000364313 SPOCK2Q92563 424 aa8.32□□□□□ -1.08
RNVU1-3-201ENST00000364313 POLA2Q14181 598 aa8.29□□□□□ -1.08
RNVU1-3-201ENST00000364313 NPM1P06748 294 aaKnown RBP eCLIP8.28□□□□□ -1.08
RNVU1-3-201ENST00000364313 STAG3Q9UJ98 1225 aa8.28□□□□□ -1.08
RNVU1-3-201ENST00000364313 ZBTB12Q9Y330 459 aaPredicted RBP8.28□□□□□ -1.08
RNVU1-3-201ENST00000364313 ECM2O94769 699 aaPredicted RBP8.26□□□□□ -1.09
RNVU1-3-201ENST00000364313 TPRNQ4KMQ1 711 aa8.24□□□□□ -1.09
RNVU1-3-201ENST00000364313 PAXIP1Q6ZW49 1069 aaPredicted RBP8.24□□□□□ -1.09
RNVU1-3-201ENST00000364313 DNAJC5Q9H3Z4 198 aa8.23□□□□□ -1.09
RNVU1-3-201ENST00000364313 SPRYD3Q8NCJ5 442 aa8.22□□□□□ -1.09
RNVU1-3-201ENST00000364313 TRHP20396 242 aaPredicted RBP8.21□□□□□ -1.1
RNVU1-3-201ENST00000364313 KLHL34Q8N239 644 aa8.21□□□□□ -1.1
RNVU1-3-201ENST00000364313 SPINK5Q9NQ38 1064 aaPredicted RBP8.21□□□□□ -1.1
RNVU1-3-201ENST00000364313 CFAP44Q96MT7 982 aa8.19□□□□□ -1.1
RNVU1-3-201ENST00000364313 RGL2O15211 777 aa8.18□□□□□ -1.1
RNVU1-3-201ENST00000364313 TSHZ2Q9NRE2 1034 aa8.15□□□□□ -1.1
RNVU1-3-201ENST00000364313 RNF39Q9H2S5 420 aa8.14□□□□□ -1.11
RNVU1-3-201ENST00000364313 TRIM41Q8WV44 630 aa8.13□□□□□ -1.11
RNVU1-3-201ENST00000364313 SSUH2Q9Y2M2 353 aa8.13□□□□□ -1.11
RNVU1-3-201ENST00000364313 SPDYE2BA6NHP3 402 aa8.11□□□□□ -1.11
RNVU1-3-201ENST00000364313 CAPN15O75808 1086 aa8.11□□□□□ -1.11
RNVU1-3-201ENST00000364313 SPDYE6P0CI01 402 aa8.11□□□□□ -1.11
RNVU1-3-201ENST00000364313 SPDYE2Q495Y8 402 aa8.11□□□□□ -1.11
RNVU1-3-201ENST00000364313 C1QBPQ07021 282 aaKnown RBP8.1□□□□□ -1.11
RNVU1-3-201ENST00000364313 PLCD3Q8N3E9 789 aa8.1□□□□□ -1.11
RNVU1-3-201ENST00000364313 ZNF692Q9BU19 519 aaPredicted RBP8.09□□□□□ -1.11
RNVU1-3-201ENST00000364313 ZBTB47Q9UFB7 747 aaPredicted RBP8.08□□□□□ -1.12
RNVU1-3-201ENST00000364313 HS6ST3Q8IZP7 471 aa8.07□□□□□ -1.12
RNVU1-3-201ENST00000364313 MIER1Q8N108 512 aa8.06□□□□□ -1.12
RNVU1-3-201ENST00000364313 CHGAP10645 457 aaKnown RBP8.05□□□□□ -1.12
RNVU1-3-201ENST00000364313 NBR1Q14596 966 aa8.03□□□□□ -1.12
RNVU1-3-201ENST00000364313 ERICH6Q7L0X2 663 aa8.01□□□□□ -1.13
RNVU1-3-201ENST00000364313 PLEKHG5O94827 1062 aa8□□□□□ -1.13
RNVU1-3-201ENST00000364313 PABPN1Q86U42 306 aaKnown RBP eCLIP8□□□□□ -1.13
RNVU1-3-201ENST00000364313 ABCB7O75027 752 aa7.98□□□□□ -1.13
RNVU1-3-201ENST00000364313 CIZ1Q9ULV3 898 aaPredicted RBP7.98□□□□□ -1.13
RNVU1-3-201ENST00000364313 GSE1Q14687 1217 aa7.95□□□□□ -1.14
RNVU1-3-201ENST00000364313 DSG3P32926 999 aa7.94□□□□□ -1.14
RNVU1-3-201ENST00000364313 OSCARQ8IYS5 282 aa7.94□□□□□ -1.14
RNVU1-3-201ENST00000364313 RNF25Q96BH1 459 aaPredicted RBP7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms