RNA–Protein interactions for RNA: ENST00000338745.10

SATB1-201, Transcript of SATB homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SATB1, Length 7,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-201ENST00000338745 DCAF8L2P0C7V8 631 aa28.33■■■□□ 2.13
SATB1-201ENST00000338745 SUPT5HO00267 1087 aaKnown RBP27.14■■□□□ 1.93
SATB1-201ENST00000338745 EHMT2Q96KQ7 1210 aa26.88■■□□□ 1.89
SATB1-201ENST00000338745 PELP1Q8IZL8 1130 aaKnown RBP26.81■■□□□ 1.88
SATB1-201ENST00000338745 SHROOM4Q9ULL8 1493 aa26.63■■□□□ 1.85
SATB1-201ENST00000338745 TTBK1Q5TCY1 1321 aaPredicted RBP26.03■■□□□ 1.76
SATB1-201ENST00000338745 ERICH6Q7L0X2 663 aa26.02■■□□□ 1.76
SATB1-201ENST00000338745 APLP2Q06481 763 aa25.99■■□□□ 1.75
SATB1-201ENST00000338745 NISCHQ9Y2I1 1504 aa25.98■■□□□ 1.75
SATB1-201ENST00000338745 PCGF6Q9BYE7 350 aa25.89■■□□□ 1.74
SATB1-201ENST00000338745 FAM9AQ8IZU1 332 aaPredicted RBP25.75■■□□□ 1.71
SATB1-201ENST00000338745 CENPBP07199 599 aaPredicted RBP25.68■■□□□ 1.7
SATB1-201ENST00000338745 CCER1Q8TC90 406 aaPredicted RBP25.61■■□□□ 1.69
SATB1-201ENST00000338745 RANGAP1P46060 587 aaPredicted RBP25.47■■□□□ 1.67
SATB1-201ENST00000338745 YTHDC1Q96MU7 727 aaKnown RBP25.39■■□□□ 1.65
SATB1-201ENST00000338745 ZEB1P37275 1124 aaPredicted RBP25.35■■□□□ 1.65
SATB1-201ENST00000338745 ATP1B4Q9UN42 357 aaPredicted RBP25.21■■□□□ 1.63
SATB1-201ENST00000338745 MYT1Q01538 1121 aa25.2■■□□□ 1.62
SATB1-201ENST00000338745 NEFLP07196 543 aa25.18■■□□□ 1.62
SATB1-201ENST00000338745 TRIM41Q8WV44 630 aa24.98■■□□□ 1.59
SATB1-201ENST00000338745 PPARGC1BQ86YN6 1023 aaKnown RBP24.89■■□□□ 1.57
SATB1-201ENST00000338745 UBTFP17480 764 aaKnown RBP24.84■■□□□ 1.57
SATB1-201ENST00000338745 DAXXQ9UER7 740 aaPredicted RBP24.67■■□□□ 1.54
SATB1-201ENST00000338745 TRIM26Q12899 539 aaPredicted RBP24.5■■□□□ 1.51
SATB1-201ENST00000338745 POLR3GLQ9BT43 218 aa24.49■■□□□ 1.51
SATB1-201ENST00000338745 HRCP23327 699 aa24.42■■□□□ 1.5
SATB1-201ENST00000338745 CNGB1Q14028 1251 aaPredicted RBP24.37■■□□□ 1.49
SATB1-201ENST00000338745 ITGAEP38570 1179 aa24.37■■□□□ 1.49
SATB1-201ENST00000338745 ZNF316A6NFI3 1004 aaPredicted RBP24.15■■□□□ 1.46
SATB1-201ENST00000338745 MYT1LQ9UL68 1186 aa24.14■■□□□ 1.46
SATB1-201ENST00000338745 HNRNPUL2Q1KMD3 747 aaKnown RBP24.12■■□□□ 1.45
SATB1-201ENST00000338745 RTL5Q5HYW3 569 aaPredicted RBP24.11■■□□□ 1.45
SATB1-201ENST00000338745 LOC105371045A0A1W2PR82 267 aa24.09■■□□□ 1.45
SATB1-201ENST00000338745 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.02■■□□□ 1.44
SATB1-201ENST00000338745 SLC4A1APQ9BWU0 796 aaKnown RBP24.01■■□□□ 1.43
SATB1-201ENST00000338745 CHIC1Q5VXU3 224 aa24■■□□□ 1.43
SATB1-201ENST00000338745 DIEXFQ68CQ4 756 aaKnown RBP23.98■■□□□ 1.43
SATB1-201ENST00000338745 CLSPNQ9HAW4 1339 aa23.97■■□□□ 1.43
SATB1-201ENST00000338745 BCANQ96GW7 911 aa23.86■■□□□ 1.41
SATB1-201ENST00000338745 GTF3C3Q9Y5Q9 886 aa23.73■■□□□ 1.39
SATB1-201ENST00000338745 NEUROD1Q13562 356 aa23.61■■□□□ 1.37
SATB1-201ENST00000338745 FAM50AQ14320 339 aaKnown RBP23.61■■□□□ 1.37
SATB1-201ENST00000338745 CDK11AQ9UQ88 783 aaPredicted RBP23.58■■□□□ 1.37
SATB1-201ENST00000338745 TRIM52Q96A61 297 aa23.5■■□□□ 1.35
SATB1-201ENST00000338745 BCL11AQ9H165 835 aa23.46■■□□□ 1.35
SATB1-201ENST00000338745 ANP32CO43423 234 aa23.43■■□□□ 1.34
SATB1-201ENST00000338745 ZNF326Q5BKZ1 582 aaKnown RBP23.34■■□□□ 1.33
SATB1-201ENST00000338745 ZBTB47Q9UFB7 747 aaPredicted RBP23.33■■□□□ 1.33
SATB1-201ENST00000338745 CANXP27824 592 aaKnown RBP23.29■■□□□ 1.32
SATB1-201ENST00000338745 SLC24A1O60721 1099 aa23.26■■□□□ 1.31
SATB1-201ENST00000338745 NPM2Q86SE8 214 aaKnown RBP23.25■■□□□ 1.31
SATB1-201ENST00000338745 ANP32AP39687 249 aaKnown RBP23.21■■□□□ 1.31
SATB1-201ENST00000338745 ACIN1Q9UKV3 1341 aaKnown RBP23.16■■□□□ 1.3
SATB1-201ENST00000338745 EIF5BO60841 1220 aaKnown RBP23.15■■□□□ 1.3
SATB1-201ENST00000338745 FKBP8Q14318 412 aa22.97■■□□□ 1.27
SATB1-201ENST00000338745 ANP32BQ92688 251 aaKnown RBP22.91■■□□□ 1.26
SATB1-201ENST00000338745 NBR1Q14596 966 aa22.9■■□□□ 1.26
SATB1-201ENST00000338745 NEFMP07197 916 aa22.88■■□□□ 1.25
SATB1-201ENST00000338745 HSP90AA1P07900 732 aaKnown RBP22.84■■□□□ 1.25
SATB1-201ENST00000338745 ARXQ96QS3 562 aa22.81■■□□□ 1.24
SATB1-201ENST00000338745 ARID3CA6NKF2 412 aa22.8■■□□□ 1.24
SATB1-201ENST00000338745 P3H3Q8IVL6 736 aa22.77■■□□□ 1.24
SATB1-201ENST00000338745 GLIPR1L2Q4G1C9 344 aa22.75■■□□□ 1.23
SATB1-201ENST00000338745 FBLN2P98095 1184 aa22.73■■□□□ 1.23
SATB1-201ENST00000338745 PABPN1Q86U42 306 aaKnown RBP eCLIP22.71■■□□□ 1.23
SATB1-201ENST00000338745 FAM9BQ8IZU0 186 aa22.7■■□□□ 1.22
SATB1-201ENST00000338745 SALL2Q9Y467 1007 aaPredicted RBP22.7■■□□□ 1.22
SATB1-201ENST00000338745 HNRNPUQ00839 825 aaKnown RBP eCLIP22.69■■□□□ 1.22
SATB1-201ENST00000338745 UPF2Q9HAU5 1272 aaKnown RBP22.68■■□□□ 1.22
SATB1-201ENST00000338745 ZNF777Q9ULD5 760 aaPredicted RBP22.64■■□□□ 1.21
SATB1-201ENST00000338745 DDX10Q13206 875 aaKnown RBP22.59■■□□□ 1.21
SATB1-201ENST00000338745 TONSLQ96HA7 1378 aa22.54■■□□□ 1.2
SATB1-201ENST00000338745 IRX6P78412 446 aaPredicted RBP22.54■■□□□ 1.2
SATB1-201ENST00000338745 CCDC136Q96JN2 1154 aa22.54■■□□□ 1.2
SATB1-201ENST00000338745 SCAF1Q9H7N4 1312 aaKnown RBP22.5■■□□□ 1.19
SATB1-201ENST00000338745 ABCC9O60706 1549 aa22.5■■□□□ 1.19
SATB1-201ENST00000338745 CHGAP10645 457 aaKnown RBP22.42■■□□□ 1.18
SATB1-201ENST00000338745 TMC1Q8TDI8 760 aa22.39■■□□□ 1.18
SATB1-201ENST00000338745 PLPPR3Q6T4P5 718 aa22.37■■□□□ 1.17
SATB1-201ENST00000338745 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.35■■□□□ 1.17
SATB1-201ENST00000338745 WDR43Q15061 677 aaKnown RBP eCLIP22.33■■□□□ 1.16
SATB1-201ENST00000338745 CSRNP3Q8WYN3 585 aa22.31■■□□□ 1.16
SATB1-201ENST00000338745 STAG3Q9UJ98 1225 aa22.31■■□□□ 1.16
SATB1-201ENST00000338745 DCAF1Q9Y4B6 1507 aa22.31■■□□□ 1.16
SATB1-201ENST00000338745 MIER1Q8N108 512 aa22.3■■□□□ 1.16
SATB1-201ENST00000338745 HIRIP3Q9BW71 556 aaPredicted RBP22.28■■□□□ 1.16
SATB1-201ENST00000338745 MRS2Q9HD23 443 aa22.25■■□□□ 1.15
SATB1-201ENST00000338745 SCRIBQ14160 1630 aa22.24■■□□□ 1.15
SATB1-201ENST00000338745 CHIC2Q9UKJ5 165 aa22.23■■□□□ 1.15
SATB1-201ENST00000338745 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.23■■□□□ 1.15
SATB1-201ENST00000338745 TRIM44Q96DX7 344 aaPredicted RBP22.22■■□□□ 1.15
SATB1-201ENST00000338745 KDM2AQ9Y2K7 1162 aa22.22■■□□□ 1.15
SATB1-201ENST00000338745 DDRGK1Q96HY6 314 aa22.2■■□□□ 1.14
SATB1-201ENST00000338745 ESF1Q9H501 851 aaKnown RBP22.2■■□□□ 1.14
SATB1-201ENST00000338745 MYH16Q9H6N6 1097 aa22.17■■□□□ 1.14
SATB1-201ENST00000338745 TPRNQ4KMQ1 711 aa22.15■■□□□ 1.14
SATB1-201ENST00000338745 BECN1Q14457 450 aa22.15■■□□□ 1.14
SATB1-201ENST00000338745 NCLP19338 710 aaKnown RBP22.12■■□□□ 1.13
SATB1-201ENST00000338745 SENP3-EIF4A1A0A087X0R7 540 aa22.12■■□□□ 1.13
SATB1-201ENST00000338745 RTN4Q9NQC3 1192 aaKnown RBP22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms