RNA–Protein interactions for RNA: ENST00000333891.13

PCLO-201, Transcript of piccolo presynaptic cytomatrix protein, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PCLO, Length 20,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCLO-201ENST00000333891 DCAF8L2P0C7V8 631 aa10.42□□□□□ -0.74
PCLO-201ENST00000333891 SUPT5HO00267 1087 aaKnown RBP9.95□□□□□ -0.82
PCLO-201ENST00000333891 EHMT2Q96KQ7 1210 aa9.83□□□□□ -0.84
PCLO-201ENST00000333891 SHROOM4Q9ULL8 1493 aa9.76□□□□□ -0.85
PCLO-201ENST00000333891 TTBK1Q5TCY1 1321 aaPredicted RBP9.49□□□□□ -0.89
PCLO-201ENST00000333891 PCGF6Q9BYE7 350 aa9.47□□□□□ -0.89
PCLO-201ENST00000333891 FAM9AQ8IZU1 332 aaPredicted RBP9.46□□□□□ -0.89
PCLO-201ENST00000333891 NISCHQ9Y2I1 1504 aa9.39□□□□□ -0.91
PCLO-201ENST00000333891 PELP1Q8IZL8 1130 aaKnown RBP9.39□□□□□ -0.91
PCLO-201ENST00000333891 APLP2Q06481 763 aa9.33□□□□□ -0.92
PCLO-201ENST00000333891 RANGAP1P46060 587 aaPredicted RBP9.3□□□□□ -0.92
PCLO-201ENST00000333891 PPARGC1BQ86YN6 1023 aaKnown RBP9.19□□□□□ -0.94
PCLO-201ENST00000333891 CCER1Q8TC90 406 aaPredicted RBP9.19□□□□□ -0.94
PCLO-201ENST00000333891 ATP1B4Q9UN42 357 aaPredicted RBP9.14□□□□□ -0.95
PCLO-201ENST00000333891 YTHDC1Q96MU7 727 aaKnown RBP9.14□□□□□ -0.95
PCLO-201ENST00000333891 CENPBP07199 599 aaPredicted RBP9.13□□□□□ -0.95
PCLO-201ENST00000333891 ERICH6Q7L0X2 663 aa9.11□□□□□ -0.95
PCLO-201ENST00000333891 ZEB1P37275 1124 aaPredicted RBP9.1□□□□□ -0.95
PCLO-201ENST00000333891 TRIM41Q8WV44 630 aa9.1□□□□□ -0.95
PCLO-201ENST00000333891 UBTFP17480 764 aaKnown RBP9.08□□□□□ -0.96
PCLO-201ENST00000333891 LOC105371045A0A1W2PR82 267 aa8.99□□□□□ -0.97
PCLO-201ENST00000333891 NEFLP07196 543 aa8.96□□□□□ -0.97
PCLO-201ENST00000333891 HRCP23327 699 aa8.94□□□□□ -0.98
PCLO-201ENST00000333891 TRIM26Q12899 539 aaPredicted RBP8.9□□□□□ -0.99
PCLO-201ENST00000333891 ITGAEP38570 1179 aa8.88□□□□□ -0.99
PCLO-201ENST00000333891 POLR3GLQ9BT43 218 aa8.86□□□□□ -0.99
PCLO-201ENST00000333891 CNGB1Q14028 1251 aaPredicted RBP8.85□□□□□ -0.99
PCLO-201ENST00000333891 MYT1Q01538 1121 aa8.83□□□□□ -1
PCLO-201ENST00000333891 HNRNPUL2Q1KMD3 747 aaKnown RBP8.82□□□□□ -1
PCLO-201ENST00000333891 CHIC1Q5VXU3 224 aa8.79□□□□□ -1
PCLO-201ENST00000333891 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.75□□□□□ -1.01
PCLO-201ENST00000333891 DAXXQ9UER7 740 aaPredicted RBP8.73□□□□□ -1.01
PCLO-201ENST00000333891 DIEXFQ68CQ4 756 aaKnown RBP8.67□□□□□ -1.02
PCLO-201ENST00000333891 BCANQ96GW7 911 aa8.67□□□□□ -1.02
PCLO-201ENST00000333891 MYT1LQ9UL68 1186 aa8.66□□□□□ -1.02
PCLO-201ENST00000333891 NEUROD1Q13562 356 aa8.62□□□□□ -1.03
PCLO-201ENST00000333891 SLC4A1APQ9BWU0 796 aaKnown RBP8.61□□□□□ -1.03
PCLO-201ENST00000333891 GTF3C3Q9Y5Q9 886 aa8.58□□□□□ -1.04
PCLO-201ENST00000333891 FAM50AQ14320 339 aaKnown RBP8.58□□□□□ -1.04
PCLO-201ENST00000333891 CLSPNQ9HAW4 1339 aa8.54□□□□□ -1.04
PCLO-201ENST00000333891 ZNF316A6NFI3 1004 aaPredicted RBP8.53□□□□□ -1.04
PCLO-201ENST00000333891 TRIM52Q96A61 297 aa8.53□□□□□ -1.04
PCLO-201ENST00000333891 RTL5Q5HYW3 569 aaPredicted RBP8.51□□□□□ -1.05
PCLO-201ENST00000333891 PABPN1Q86U42 306 aaKnown RBP eCLIP8.5□□□□□ -1.05
PCLO-201ENST00000333891 BCL11AQ9H165 835 aa8.46□□□□□ -1.05
PCLO-201ENST00000333891 ZNF326Q5BKZ1 582 aaKnown RBP8.46□□□□□ -1.05
PCLO-201ENST00000333891 ANP32CO43423 234 aa8.45□□□□□ -1.06
PCLO-201ENST00000333891 ARID3CA6NKF2 412 aa8.42□□□□□ -1.06
PCLO-201ENST00000333891 CDK11AQ9UQ88 783 aaPredicted RBP8.42□□□□□ -1.06
PCLO-201ENST00000333891 ACIN1Q9UKV3 1341 aaKnown RBP8.41□□□□□ -1.06
PCLO-201ENST00000333891 P3H3Q8IVL6 736 aa8.4□□□□□ -1.06
PCLO-201ENST00000333891 NPM2Q86SE8 214 aaKnown RBP8.33□□□□□ -1.08
PCLO-201ENST00000333891 FBLN2P98095 1184 aa8.31□□□□□ -1.08
PCLO-201ENST00000333891 ZBTB47Q9UFB7 747 aaPredicted RBP8.29□□□□□ -1.08
PCLO-201ENST00000333891 FKBP8Q14318 412 aa8.29□□□□□ -1.08
PCLO-201ENST00000333891 CANXP27824 592 aaKnown RBP8.28□□□□□ -1.08
PCLO-201ENST00000333891 SLC24A1O60721 1099 aa8.28□□□□□ -1.08
PCLO-201ENST00000333891 DDX10Q13206 875 aaKnown RBP8.28□□□□□ -1.08
PCLO-201ENST00000333891 CSRNP3Q8WYN3 585 aa8.25□□□□□ -1.09
PCLO-201ENST00000333891 ANP32AP39687 249 aaKnown RBP8.24□□□□□ -1.09
PCLO-201ENST00000333891 ZNF777Q9ULD5 760 aaPredicted RBP8.24□□□□□ -1.09
PCLO-201ENST00000333891 SALL2Q9Y467 1007 aaPredicted RBP8.24□□□□□ -1.09
PCLO-201ENST00000333891 SCAF1Q9H7N4 1312 aaKnown RBP8.23□□□□□ -1.09
PCLO-201ENST00000333891 NBR1Q14596 966 aa8.23□□□□□ -1.09
PCLO-201ENST00000333891 IRX6P78412 446 aaPredicted RBP8.22□□□□□ -1.09
PCLO-201ENST00000333891 EIF5BO60841 1220 aaKnown RBP8.22□□□□□ -1.09
PCLO-201ENST00000333891 MIER1Q8N108 512 aa8.22□□□□□ -1.09
PCLO-201ENST00000333891 HIRIP3Q9BW71 556 aaPredicted RBP8.21□□□□□ -1.09
PCLO-201ENST00000333891 FAM9BQ8IZU0 186 aa8.2□□□□□ -1.1
PCLO-201ENST00000333891 HNRNPUQ00839 825 aaKnown RBP eCLIP8.19□□□□□ -1.1
PCLO-201ENST00000333891 ABCC9O60706 1549 aa8.18□□□□□ -1.1
PCLO-201ENST00000333891 SENP3-EIF4A1A0A087X0R7 540 aa8.16□□□□□ -1.1
PCLO-201ENST00000333891 CHIC2Q9UKJ5 165 aa8.16□□□□□ -1.1
PCLO-201ENST00000333891 ARXQ96QS3 562 aa8.16□□□□□ -1.1
PCLO-201ENST00000333891 SENP3Q9H4L4 574 aaPredicted RBP8.15□□□□□ -1.1
PCLO-201ENST00000333891 CHGAP10645 457 aaKnown RBP8.15□□□□□ -1.11
PCLO-201ENST00000333891 PLPPR3Q6T4P5 718 aa8.14□□□□□ -1.11
PCLO-201ENST00000333891 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.14□□□□□ -1.11
PCLO-201ENST00000333891 NEFMP07197 916 aa8.13□□□□□ -1.11
PCLO-201ENST00000333891 CCDC136Q96JN2 1154 aa8.13□□□□□ -1.11
PCLO-201ENST00000333891 KDM2AQ9Y2K7 1162 aa8.13□□□□□ -1.11
PCLO-201ENST00000333891 HSP90AA1P07900 732 aaKnown RBP8.13□□□□□ -1.11
PCLO-201ENST00000333891 TMC1Q8TDI8 760 aa8.1□□□□□ -1.11
PCLO-201ENST00000333891 MRS2Q9HD23 443 aa8.1□□□□□ -1.11
PCLO-201ENST00000333891 TONSLQ96HA7 1378 aa8.07□□□□□ -1.12
PCLO-201ENST00000333891 RRP7BPQ9NSQ0 103 aa8.07□□□□□ -1.12
PCLO-201ENST00000333891 ANP32BQ92688 251 aaKnown RBP8.06□□□□□ -1.12
PCLO-201ENST00000333891 STAG3Q9UJ98 1225 aa8.06□□□□□ -1.12
PCLO-201ENST00000333891 PLEKHG5O94827 1062 aa8.02□□□□□ -1.13
PCLO-201ENST00000333891 UPF2Q9HAU5 1272 aaKnown RBP8.02□□□□□ -1.13
PCLO-201ENST00000333891 DCAF1Q9Y4B6 1507 aa8.02□□□□□ -1.13
PCLO-201ENST00000333891 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.01□□□□□ -1.13
PCLO-201ENST00000333891 SUPT16HQ9Y5B9 1047 aaKnown RBP8□□□□□ -1.13
PCLO-201ENST00000333891 WDR43Q15061 677 aaKnown RBP eCLIP7.99□□□□□ -1.13
PCLO-201ENST00000333891 ESF1Q9H501 851 aaKnown RBP7.99□□□□□ -1.13
PCLO-201ENST00000333891 RGL3Q3MIN7 710 aa7.98□□□□□ -1.13
PCLO-201ENST00000333891 TPRNQ4KMQ1 711 aa7.97□□□□□ -1.13
PCLO-201ENST00000333891 LAS1LQ9Y4W2 734 aaKnown RBP7.97□□□□□ -1.13
PCLO-201ENST00000333891 MYO15BQ96JP2 1530 aa7.96□□□□□ -1.13
PCLO-201ENST00000333891 SIN3AQ96ST3 1273 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms