RNA–Protein interactions for RNA: ENST00000325278.6

MTHFD2L-201, Transcript of methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2 like, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MTHFD2L, Length 2,300 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD2L-201ENST00000325278 CHIC1Q5VXU3 224 aa21.41■■□□□ 1.02
MTHFD2L-201ENST00000325278 AEBP2Q6ZN18 517 aaPredicted RBP20.98■□□□□ 0.95
MTHFD2L-201ENST00000325278 PHF23Q9BUL5 403 aaPredicted RBP19■□□□□ 0.63
MTHFD2L-201ENST00000325278 PLPPR3Q6T4P5 718 aa17.83■□□□□ 0.45
MTHFD2L-201ENST00000325278 SENP3Q9H4L4 574 aaPredicted RBP17.55■□□□□ 0.4
MTHFD2L-201ENST00000325278 EHMT2Q96KQ7 1210 aa16.9■□□□□ 0.3
MTHFD2L-201ENST00000325278 ADRA2BP18089 450 aa16.78■□□□□ 0.28
MTHFD2L-201ENST00000325278 KCNA4P22459 653 aa16.73■□□□□ 0.27
MTHFD2L-201ENST00000325278 PPP6R1Q9UPN7 881 aa16.46■□□□□ 0.23
MTHFD2L-201ENST00000325278 FOXD1Q16676 465 aa16.23■□□□□ 0.19
MTHFD2L-201ENST00000325278 CSRNP3Q8WYN3 585 aa16.14■□□□□ 0.18
MTHFD2L-201ENST00000325278 SLC4A1APQ9BWU0 796 aaKnown RBP16.07■□□□□ 0.16
MTHFD2L-201ENST00000325278 PPP4R3CPQ6ZMV5 832 aa15.87■□□□□ 0.13
MTHFD2L-201ENST00000325278 NCBP3Q53F19 620 aaKnown RBP15.69■□□□□ 0.1
MTHFD2L-201ENST00000325278 PIAS4Q8N2W9 510 aaPredicted RBP15.58■□□□□ 0.08
MTHFD2L-201ENST00000325278 NPM3O75607 178 aaKnown RBP15.55■□□□□ 0.08
MTHFD2L-201ENST00000325278 ZBTB22O15209 634 aa15.43■□□□□ 0.06
MTHFD2L-201ENST00000325278 SLC24A1O60721 1099 aa15.27■□□□□ 0.03
MTHFD2L-201ENST00000325278 CNKSR2Q8WXI2 1034 aa15.16■□□□□ 0.02
MTHFD2L-201ENST00000325278 RTN4Q9NQC3 1192 aaKnown RBP15.1■□□□□ 0.01
MTHFD2L-201ENST00000325278 FOXD4L1Q9NU39 408 aa15.03■□□□□ -0
MTHFD2L-201ENST00000325278 AMER1Q5JTC6 1135 aaPredicted RBP14.99□□□□□ -0.01
MTHFD2L-201ENST00000325278 SCAF1Q9H7N4 1312 aaKnown RBP14.97□□□□□ -0.01
MTHFD2L-201ENST00000325278 DNAJC5BQ9UF47 199 aa14.76□□□□□ -0.05
MTHFD2L-201ENST00000325278 MAPK8IP2Q13387 824 aaPredicted RBP14.69□□□□□ -0.06
MTHFD2L-201ENST00000325278 RNF216Q9NWF9 866 aaPredicted RBP14.6□□□□□ -0.07
MTHFD2L-201ENST00000325278 FKBP8Q14318 412 aa14.56□□□□□ -0.08
MTHFD2L-201ENST00000325278 MSH5O43196 834 aa14.48□□□□□ -0.09
MTHFD2L-201ENST00000325278 SLC4A2P04920 1241 aa14.43□□□□□ -0.1
MTHFD2L-201ENST00000325278 ATXN8OSP0DMR3 200 aa14.33□□□□□ -0.12
MTHFD2L-201ENST00000325278 MYCNP04198 464 aaPredicted RBP14.3□□□□□ -0.12
MTHFD2L-201ENST00000325278 HOXD11P31277 338 aaPredicted RBP14.27□□□□□ -0.13
MTHFD2L-201ENST00000325278 DMRT2Q9Y5R5 561 aa14.18□□□□□ -0.14
MTHFD2L-201ENST00000325278 ATF5Q9Y2D1 282 aaPredicted RBP13.93□□□□□ -0.18
MTHFD2L-201ENST00000325278 PLCB2Q00722 1185 aa13.82□□□□□ -0.2
MTHFD2L-201ENST00000325278 HAP1P54257 671 aaPredicted RBP13.68□□□□□ -0.22
MTHFD2L-201ENST00000325278 SAMD1Q6SPF0 538 aaPredicted RBP13.67□□□□□ -0.22
MTHFD2L-201ENST00000325278 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.66□□□□□ -0.22
MTHFD2L-201ENST00000325278 FBXO3Q9UK99 471 aa13.65□□□□□ -0.22
MTHFD2L-201ENST00000325278 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.64□□□□□ -0.23
MTHFD2L-201ENST00000325278 HNRNPUL2Q1KMD3 747 aaKnown RBP13.64□□□□□ -0.23
MTHFD2L-201ENST00000325278 DCAF8L1A6NGE4 600 aa13.63□□□□□ -0.23
MTHFD2L-201ENST00000325278 DCAF8L2P0C7V8 631 aa13.6□□□□□ -0.23
MTHFD2L-201ENST00000325278 PRKCSHP14314 528 aaPredicted RBP13.57□□□□□ -0.24
MTHFD2L-201ENST00000325278 U3KPZ7 1027 aaPredicted RBP13.57□□□□□ -0.24
MTHFD2L-201ENST00000325278 BCANQ96GW7 911 aa13.56□□□□□ -0.24
MTHFD2L-201ENST00000325278 SPDYE4A6NLX3 237 aa13.52□□□□□ -0.24
MTHFD2L-201ENST00000325278 ZNF219Q9P2Y4 722 aaPredicted RBP13.51□□□□□ -0.25
MTHFD2L-201ENST00000325278 VASPP50552 380 aaPredicted RBP13.5□□□□□ -0.25
MTHFD2L-201ENST00000325278 TAOK2Q9UL54 1235 aa13.45□□□□□ -0.26
MTHFD2L-201ENST00000325278 POTEDQ86YR6 584 aa13.44□□□□□ -0.26
MTHFD2L-201ENST00000325278 IFNLR1Q8IU57 520 aaPredicted RBP13.42□□□□□ -0.26
MTHFD2L-201ENST00000325278 VSIG10Q8N0Z9 540 aa13.39□□□□□ -0.27
MTHFD2L-201ENST00000325278 PROM2Q8N271 834 aa13.38□□□□□ -0.27
MTHFD2L-201ENST00000325278 PKD2Q13563 968 aa13.36□□□□□ -0.27
MTHFD2L-201ENST00000325278 MKRN4PQ13434 485 aaPredicted RBP13.35□□□□□ -0.27
MTHFD2L-201ENST00000325278 TPRNQ4KMQ1 711 aa13.27□□□□□ -0.28
MTHFD2L-201ENST00000325278 KDM2AQ9Y2K7 1162 aa13.23□□□□□ -0.29
MTHFD2L-201ENST00000325278 APLP2Q06481 763 aa13.23□□□□□ -0.29
MTHFD2L-201ENST00000325278 FBLN2P98095 1184 aa13.2□□□□□ -0.3
MTHFD2L-201ENST00000325278 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.19□□□□□ -0.3
MTHFD2L-201ENST00000325278 PAXIP1Q6ZW49 1069 aaPredicted RBP13.16□□□□□ -0.3
MTHFD2L-201ENST00000325278 BBXQ8WY36 941 aaPredicted RBP13.16□□□□□ -0.3
MTHFD2L-201ENST00000325278 CFAP44Q96MT7 982 aa13.14□□□□□ -0.31
MTHFD2L-201ENST00000325278 NPM1P06748 294 aaKnown RBP eCLIP13.12□□□□□ -0.31
MTHFD2L-201ENST00000325278 ECM2O94769 699 aaPredicted RBP13.1□□□□□ -0.31
MTHFD2L-201ENST00000325278 KLHL34Q8N239 644 aa13.06□□□□□ -0.32
MTHFD2L-201ENST00000325278 SPOCK2Q92563 424 aa13.04□□□□□ -0.32
MTHFD2L-201ENST00000325278 TRHP20396 242 aaPredicted RBP13.01□□□□□ -0.33
MTHFD2L-201ENST00000325278 POLA2Q14181 598 aa13.01□□□□□ -0.33
MTHFD2L-201ENST00000325278 TSHZ2Q9NRE2 1034 aa12.97□□□□□ -0.33
MTHFD2L-201ENST00000325278 RGL2O15211 777 aa12.96□□□□□ -0.34
MTHFD2L-201ENST00000325278 SPRYD3Q8NCJ5 442 aa12.95□□□□□ -0.34
MTHFD2L-201ENST00000325278 SPINK5Q9NQ38 1064 aaPredicted RBP12.94□□□□□ -0.34
MTHFD2L-201ENST00000325278 PLCD3Q8N3E9 789 aa12.83□□□□□ -0.36
MTHFD2L-201ENST00000325278 CHGAP10645 457 aaKnown RBP12.82□□□□□ -0.36
MTHFD2L-201ENST00000325278 CAPN15O75808 1086 aa12.81□□□□□ -0.36
MTHFD2L-201ENST00000325278 NBR1Q14596 966 aa12.81□□□□□ -0.36
MTHFD2L-201ENST00000325278 TIMELESSQ9UNS1 1208 aa12.77□□□□□ -0.36
MTHFD2L-201ENST00000325278 STAG3Q9UJ98 1225 aa12.77□□□□□ -0.37
MTHFD2L-201ENST00000325278 ZBTB12Q9Y330 459 aaPredicted RBP12.76□□□□□ -0.37
MTHFD2L-201ENST00000325278 TULP1O00294 542 aaPredicted RBP12.73□□□□□ -0.37
MTHFD2L-201ENST00000325278 CIZ1Q9ULV3 898 aaPredicted RBP12.73□□□□□ -0.37
MTHFD2L-201ENST00000325278 MIER1Q8N108 512 aa12.72□□□□□ -0.37
MTHFD2L-201ENST00000325278 DNAJC5Q9H3Z4 198 aa12.71□□□□□ -0.38
MTHFD2L-201ENST00000325278 ABCB7O75027 752 aa12.7□□□□□ -0.38
MTHFD2L-201ENST00000325278 ZNF692Q9BU19 519 aaPredicted RBP12.7□□□□□ -0.38
MTHFD2L-201ENST00000325278 GTF3C3Q9Y5Q9 886 aa12.62□□□□□ -0.39
MTHFD2L-201ENST00000325278 HS6ST3Q8IZP7 471 aa12.6□□□□□ -0.39
MTHFD2L-201ENST00000325278 PABPN1Q86U42 306 aaKnown RBP eCLIP12.58□□□□□ -0.4
MTHFD2L-201ENST00000325278 OSCARQ8IYS5 282 aa12.56□□□□□ -0.4
MTHFD2L-201ENST00000325278 SSUH2Q9Y2M2 353 aa12.56□□□□□ -0.4
MTHFD2L-201ENST00000325278 RNF39Q9H2S5 420 aa12.55□□□□□ -0.4
MTHFD2L-201ENST00000325278 SPDYE2BA6NHP3 402 aa12.53□□□□□ -0.4
MTHFD2L-201ENST00000325278 SPDYE6P0CI01 402 aa12.53□□□□□ -0.4
MTHFD2L-201ENST00000325278 SPDYE2Q495Y8 402 aa12.53□□□□□ -0.4
MTHFD2L-201ENST00000325278 ZBTB47Q9UFB7 747 aaPredicted RBP12.53□□□□□ -0.4
MTHFD2L-201ENST00000325278 PLEKHG5O94827 1062 aa12.52□□□□□ -0.41
MTHFD2L-201ENST00000325278 TRIM41Q8WV44 630 aa12.5□□□□□ -0.41
MTHFD2L-201ENST00000325278 RNF25Q96BH1 459 aaPredicted RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms