RNA–Protein interactions for RNA: ENST00000320672.8

SSBP2-201, Transcript of single stranded DNA binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP2, Length 8,780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-201ENST00000320672 DCAF8L2P0C7V8 631 aa15.95■□□□□ 0.14
SSBP2-201ENST00000320672 EHMT2Q96KQ7 1210 aa15.3■□□□□ 0.04
SSBP2-201ENST00000320672 SUPT5HO00267 1087 aaKnown RBP15.03■□□□□ -0
SSBP2-201ENST00000320672 SHROOM4Q9ULL8 1493 aa14.78□□□□□ -0.04
SSBP2-201ENST00000320672 TTBK1Q5TCY1 1321 aaPredicted RBP14.67□□□□□ -0.06
SSBP2-201ENST00000320672 FAM9AQ8IZU1 332 aaPredicted RBP14.41□□□□□ -0.1
SSBP2-201ENST00000320672 RANGAP1P46060 587 aaPredicted RBP14.37□□□□□ -0.11
SSBP2-201ENST00000320672 PCGF6Q9BYE7 350 aa14.08□□□□□ -0.16
SSBP2-201ENST00000320672 PPARGC1BQ86YN6 1023 aaKnown RBP14.03□□□□□ -0.16
SSBP2-201ENST00000320672 ATP1B4Q9UN42 357 aaPredicted RBP13.97□□□□□ -0.17
SSBP2-201ENST00000320672 NISCHQ9Y2I1 1504 aa13.93□□□□□ -0.18
SSBP2-201ENST00000320672 YTHDC1Q96MU7 727 aaKnown RBP13.89□□□□□ -0.19
SSBP2-201ENST00000320672 APLP2Q06481 763 aa13.86□□□□□ -0.19
SSBP2-201ENST00000320672 CNGB1Q14028 1251 aaPredicted RBP13.76□□□□□ -0.21
SSBP2-201ENST00000320672 CCER1Q8TC90 406 aaPredicted RBP13.67□□□□□ -0.22
SSBP2-201ENST00000320672 PELP1Q8IZL8 1130 aaKnown RBP13.64□□□□□ -0.23
SSBP2-201ENST00000320672 ERICH6Q7L0X2 663 aa13.63□□□□□ -0.23
SSBP2-201ENST00000320672 MYT1Q01538 1121 aa13.57□□□□□ -0.24
SSBP2-201ENST00000320672 CHIC1Q5VXU3 224 aa13.54□□□□□ -0.24
SSBP2-201ENST00000320672 ITGAEP38570 1179 aa13.54□□□□□ -0.24
SSBP2-201ENST00000320672 POLR3GLQ9BT43 218 aa13.53□□□□□ -0.24
SSBP2-201ENST00000320672 UBTFP17480 764 aaKnown RBP13.52□□□□□ -0.24
SSBP2-201ENST00000320672 TRIM41Q8WV44 630 aa13.51□□□□□ -0.25
SSBP2-201ENST00000320672 LOC105371045A0A1W2PR82 267 aa13.37□□□□□ -0.27
SSBP2-201ENST00000320672 CENPBP07199 599 aaPredicted RBP13.35□□□□□ -0.27
SSBP2-201ENST00000320672 MYT1LQ9UL68 1186 aa13.34□□□□□ -0.27
SSBP2-201ENST00000320672 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.27□□□□□ -0.28
SSBP2-201ENST00000320672 HNRNPUL2Q1KMD3 747 aaKnown RBP13.27□□□□□ -0.28
SSBP2-201ENST00000320672 NEFLP07196 543 aa13.19□□□□□ -0.3
SSBP2-201ENST00000320672 SLC4A1APQ9BWU0 796 aaKnown RBP13.17□□□□□ -0.3
SSBP2-201ENST00000320672 BCL11AQ9H165 835 aa13.14□□□□□ -0.31
SSBP2-201ENST00000320672 BCANQ96GW7 911 aa13.1□□□□□ -0.31
SSBP2-201ENST00000320672 HRCP23327 699 aa13.06□□□□□ -0.32
SSBP2-201ENST00000320672 ZEB1P37275 1124 aaPredicted RBP13.02□□□□□ -0.33
SSBP2-201ENST00000320672 ARID3CA6NKF2 412 aa12.95□□□□□ -0.34
SSBP2-201ENST00000320672 NEUROD1Q13562 356 aa12.94□□□□□ -0.34
SSBP2-201ENST00000320672 TRIM26Q12899 539 aaPredicted RBP12.93□□□□□ -0.34
SSBP2-201ENST00000320672 DAXXQ9UER7 740 aaPredicted RBP12.9□□□□□ -0.34
SSBP2-201ENST00000320672 ZNF326Q5BKZ1 582 aaKnown RBP12.88□□□□□ -0.35
SSBP2-201ENST00000320672 FAM50AQ14320 339 aaKnown RBP12.86□□□□□ -0.35
SSBP2-201ENST00000320672 CLSPNQ9HAW4 1339 aa12.82□□□□□ -0.36
SSBP2-201ENST00000320672 PLPPR3Q6T4P5 718 aa12.82□□□□□ -0.36
SSBP2-201ENST00000320672 PABPN1Q86U42 306 aaKnown RBP eCLIP12.82□□□□□ -0.36
SSBP2-201ENST00000320672 TRIM52Q96A61 297 aa12.81□□□□□ -0.36
SSBP2-201ENST00000320672 SLC24A1O60721 1099 aa12.8□□□□□ -0.36
SSBP2-201ENST00000320672 SENP3Q9H4L4 574 aaPredicted RBP12.76□□□□□ -0.37
SSBP2-201ENST00000320672 DIEXFQ68CQ4 756 aaKnown RBP12.75□□□□□ -0.37
SSBP2-201ENST00000320672 P3H3Q8IVL6 736 aa12.75□□□□□ -0.37
SSBP2-201ENST00000320672 FBLN2P98095 1184 aa12.72□□□□□ -0.37
SSBP2-201ENST00000320672 GTF3C3Q9Y5Q9 886 aa12.71□□□□□ -0.37
SSBP2-201ENST00000320672 ZNF316A6NFI3 1004 aaPredicted RBP12.66□□□□□ -0.38
SSBP2-201ENST00000320672 SENP3-EIF4A1A0A087X0R7 540 aa12.66□□□□□ -0.38
SSBP2-201ENST00000320672 SALL2Q9Y467 1007 aaPredicted RBP12.61□□□□□ -0.39
SSBP2-201ENST00000320672 NPM2Q86SE8 214 aaKnown RBP12.6□□□□□ -0.39
SSBP2-201ENST00000320672 PLEKHG5O94827 1062 aa12.6□□□□□ -0.39
SSBP2-201ENST00000320672 RTL5Q5HYW3 569 aaPredicted RBP12.56□□□□□ -0.4
SSBP2-201ENST00000320672 ZNF777Q9ULD5 760 aaPredicted RBP12.52□□□□□ -0.4
SSBP2-201ENST00000320672 ARXQ96QS3 562 aa12.49□□□□□ -0.41
SSBP2-201ENST00000320672 HIRIP3Q9BW71 556 aaPredicted RBP12.48□□□□□ -0.41
SSBP2-201ENST00000320672 IRX6P78412 446 aaPredicted RBP12.43□□□□□ -0.42
SSBP2-201ENST00000320672 CANXP27824 592 aaKnown RBP12.43□□□□□ -0.42
SSBP2-201ENST00000320672 CHGAP10645 457 aaKnown RBP12.43□□□□□ -0.42
SSBP2-201ENST00000320672 ANP32CO43423 234 aa12.4□□□□□ -0.42
SSBP2-201ENST00000320672 CDK11AQ9UQ88 783 aaPredicted RBP12.35□□□□□ -0.43
SSBP2-201ENST00000320672 FAM9BQ8IZU0 186 aa12.35□□□□□ -0.43
SSBP2-201ENST00000320672 ABCC9O60706 1549 aa12.35□□□□□ -0.43
SSBP2-201ENST00000320672 FKBP8Q14318 412 aa12.35□□□□□ -0.43
SSBP2-201ENST00000320672 EIF5BO60841 1220 aaKnown RBP12.33□□□□□ -0.44
SSBP2-201ENST00000320672 CHIC2Q9UKJ5 165 aa12.33□□□□□ -0.44
SSBP2-201ENST00000320672 NBR1Q14596 966 aa12.32□□□□□ -0.44
SSBP2-201ENST00000320672 ZBTB47Q9UFB7 747 aaPredicted RBP12.31□□□□□ -0.44
SSBP2-201ENST00000320672 DDX10Q13206 875 aaKnown RBP12.3□□□□□ -0.44
SSBP2-201ENST00000320672 A0A0G2JS52 829 aa12.3□□□□□ -0.44
SSBP2-201ENST00000320672 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.29□□□□□ -0.44
SSBP2-201ENST00000320672 ZBTB7CA1YPR0 619 aa12.28□□□□□ -0.44
SSBP2-201ENST00000320672 SCAF1Q9H7N4 1312 aaKnown RBP12.26□□□□□ -0.45
SSBP2-201ENST00000320672 TPRNQ4KMQ1 711 aa12.25□□□□□ -0.45
SSBP2-201ENST00000320672 KDM2AQ9Y2K7 1162 aa12.25□□□□□ -0.45
SSBP2-201ENST00000320672 ACIN1Q9UKV3 1341 aaKnown RBP12.23□□□□□ -0.45
SSBP2-201ENST00000320672 HNRNPUQ00839 825 aaKnown RBP eCLIP12.21□□□□□ -0.45
SSBP2-201ENST00000320672 STAG3Q9UJ98 1225 aa12.16□□□□□ -0.46
SSBP2-201ENST00000320672 TAOK2Q9UL54 1235 aa12.16□□□□□ -0.46
SSBP2-201ENST00000320672 ANP32AP39687 249 aaKnown RBP12.1□□□□□ -0.47
SSBP2-201ENST00000320672 NEFMP07197 916 aa12.09□□□□□ -0.47
SSBP2-201ENST00000320672 TULP1O00294 542 aaPredicted RBP12.09□□□□□ -0.47
SSBP2-201ENST00000320672 HSP90AA1P07900 732 aaKnown RBP12.08□□□□□ -0.48
SSBP2-201ENST00000320672 MIER1Q8N108 512 aa12.08□□□□□ -0.48
SSBP2-201ENST00000320672 C14orf37Q86TY3 774 aa12.06□□□□□ -0.48
SSBP2-201ENST00000320672 CSRNP3Q8WYN3 585 aa12.06□□□□□ -0.48
SSBP2-201ENST00000320672 ESF1Q9H501 851 aaKnown RBP12.04□□□□□ -0.48
SSBP2-201ENST00000320672 RGL3Q3MIN7 710 aa12.03□□□□□ -0.48
SSBP2-201ENST00000320672 RTN4Q9NQC3 1192 aaKnown RBP12.03□□□□□ -0.48
SSBP2-201ENST00000320672 AMER1Q5JTC6 1135 aaPredicted RBP12.02□□□□□ -0.49
SSBP2-201ENST00000320672 RRP7BPQ9NSQ0 103 aa12.02□□□□□ -0.49
SSBP2-201ENST00000320672 KCNH8Q96L42 1107 aa12.01□□□□□ -0.49
SSBP2-201ENST00000320672 CCDC136Q96JN2 1154 aa11.99□□□□□ -0.49
SSBP2-201ENST00000320672 NEUROD2Q15784 382 aa11.98□□□□□ -0.49
SSBP2-201ENST00000320672 TMC1Q8TDI8 760 aa11.97□□□□□ -0.49
SSBP2-201ENST00000320672 PPM1GO15355 546 aaPredicted RBP11.97□□□□□ -0.49
SSBP2-201ENST00000320672 MRS2Q9HD23 443 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms