RNA–Protein interactions for RNA: ENST00000319170.9

RAPH1-202, Transcript of Ras association (RalGDS/AF-6) and pleckstrin homology domains 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPH1, Length 9,808 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1-202ENST00000319170 DCAF8L2P0C7V8 631 aa24.01■■□□□ 1.43
RAPH1-202ENST00000319170 PELP1Q8IZL8 1130 aaKnown RBP22.79■■□□□ 1.24
RAPH1-202ENST00000319170 SUPT5HO00267 1087 aaKnown RBP22.78■■□□□ 1.24
RAPH1-202ENST00000319170 EHMT2Q96KQ7 1210 aa22.57■■□□□ 1.2
RAPH1-202ENST00000319170 SHROOM4Q9ULL8 1493 aa22.37■■□□□ 1.17
RAPH1-202ENST00000319170 APLP2Q06481 763 aa22.11■■□□□ 1.13
RAPH1-202ENST00000319170 ERICH6Q7L0X2 663 aa21.98■■□□□ 1.11
RAPH1-202ENST00000319170 NISCHQ9Y2I1 1504 aa21.92■■□□□ 1.1
RAPH1-202ENST00000319170 TTBK1Q5TCY1 1321 aaPredicted RBP21.88■■□□□ 1.09
RAPH1-202ENST00000319170 FAM9AQ8IZU1 332 aaPredicted RBP21.74■■□□□ 1.07
RAPH1-202ENST00000319170 CCER1Q8TC90 406 aaPredicted RBP21.74■■□□□ 1.07
RAPH1-202ENST00000319170 CENPBP07199 599 aaPredicted RBP21.61■■□□□ 1.05
RAPH1-202ENST00000319170 PCGF6Q9BYE7 350 aa21.6■■□□□ 1.05
RAPH1-202ENST00000319170 RANGAP1P46060 587 aaPredicted RBP21.5■■□□□ 1.03
RAPH1-202ENST00000319170 ATP1B4Q9UN42 357 aaPredicted RBP21.37■■□□□ 1.01
RAPH1-202ENST00000319170 NEFLP07196 543 aa21.32■■□□□ 1
RAPH1-202ENST00000319170 ZEB1P37275 1124 aaPredicted RBP21.31■■□□□ 1
RAPH1-202ENST00000319170 YTHDC1Q96MU7 727 aaKnown RBP21.26■□□□□ 0.99
RAPH1-202ENST00000319170 MYT1Q01538 1121 aa21.14■□□□□ 0.97
RAPH1-202ENST00000319170 TRIM41Q8WV44 630 aa21.04■□□□□ 0.96
RAPH1-202ENST00000319170 UBTFP17480 764 aaKnown RBP21■□□□□ 0.95
RAPH1-202ENST00000319170 DAXXQ9UER7 740 aaPredicted RBP20.96■□□□□ 0.95
RAPH1-202ENST00000319170 PPARGC1BQ86YN6 1023 aaKnown RBP20.77■□□□□ 0.92
RAPH1-202ENST00000319170 POLR3GLQ9BT43 218 aa20.72■□□□□ 0.91
RAPH1-202ENST00000319170 MYT1LQ9UL68 1186 aa20.63■□□□□ 0.89
RAPH1-202ENST00000319170 ITGAEP38570 1179 aa20.53■□□□□ 0.88
RAPH1-202ENST00000319170 CNGB1Q14028 1251 aaPredicted RBP20.52■□□□□ 0.88
RAPH1-202ENST00000319170 ZNF316A6NFI3 1004 aaPredicted RBP20.48■□□□□ 0.87
RAPH1-202ENST00000319170 TRIM26Q12899 539 aaPredicted RBP20.47■□□□□ 0.87
RAPH1-202ENST00000319170 CHIC1Q5VXU3 224 aa20.45■□□□□ 0.86
RAPH1-202ENST00000319170 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.44■□□□□ 0.86
RAPH1-202ENST00000319170 HNRNPUL2Q1KMD3 747 aaKnown RBP20.44■□□□□ 0.86
RAPH1-202ENST00000319170 SLC4A1APQ9BWU0 796 aaKnown RBP20.44■□□□□ 0.86
RAPH1-202ENST00000319170 RTL5Q5HYW3 569 aaPredicted RBP20.37■□□□□ 0.85
RAPH1-202ENST00000319170 HRCP23327 699 aa20.34■□□□□ 0.85
RAPH1-202ENST00000319170 CLSPNQ9HAW4 1339 aa20.34■□□□□ 0.85
RAPH1-202ENST00000319170 DIEXFQ68CQ4 756 aaKnown RBP20.03■□□□□ 0.8
RAPH1-202ENST00000319170 LOC105371045A0A1W2PR82 267 aa20.01■□□□□ 0.79
RAPH1-202ENST00000319170 FAM50AQ14320 339 aaKnown RBP19.94■□□□□ 0.78
RAPH1-202ENST00000319170 BCANQ96GW7 911 aa19.93■□□□□ 0.78
RAPH1-202ENST00000319170 ZBTB47Q9UFB7 747 aaPredicted RBP19.91■□□□□ 0.78
RAPH1-202ENST00000319170 TRIM52Q96A61 297 aa19.86■□□□□ 0.77
RAPH1-202ENST00000319170 NEUROD1Q13562 356 aa19.85■□□□□ 0.77
RAPH1-202ENST00000319170 BCL11AQ9H165 835 aa19.85■□□□□ 0.77
RAPH1-202ENST00000319170 SLC24A1O60721 1099 aa19.82■□□□□ 0.76
RAPH1-202ENST00000319170 CDK11AQ9UQ88 783 aaPredicted RBP19.82■□□□□ 0.76
RAPH1-202ENST00000319170 CANXP27824 592 aaKnown RBP19.79■□□□□ 0.76
RAPH1-202ENST00000319170 ZNF326Q5BKZ1 582 aaKnown RBP19.76■□□□□ 0.75
RAPH1-202ENST00000319170 ANP32CO43423 234 aa19.74■□□□□ 0.75
RAPH1-202ENST00000319170 GTF3C3Q9Y5Q9 886 aa19.7■□□□□ 0.74
RAPH1-202ENST00000319170 ANP32AP39687 249 aaKnown RBP19.57■□□□□ 0.72
RAPH1-202ENST00000319170 NEFMP07197 916 aa19.54■□□□□ 0.72
RAPH1-202ENST00000319170 NPM2Q86SE8 214 aaKnown RBP19.52■□□□□ 0.72
RAPH1-202ENST00000319170 ANP32BQ92688 251 aaKnown RBP19.46■□□□□ 0.71
RAPH1-202ENST00000319170 EIF5BO60841 1220 aaKnown RBP19.41■□□□□ 0.7
RAPH1-202ENST00000319170 HSP90AA1P07900 732 aaKnown RBP19.4■□□□□ 0.7
RAPH1-202ENST00000319170 FBLN2P98095 1184 aa19.36■□□□□ 0.69
RAPH1-202ENST00000319170 ARID3CA6NKF2 412 aa19.26■□□□□ 0.67
RAPH1-202ENST00000319170 UPF2Q9HAU5 1272 aaKnown RBP19.24■□□□□ 0.67
RAPH1-202ENST00000319170 ACIN1Q9UKV3 1341 aaKnown RBP19.22■□□□□ 0.67
RAPH1-202ENST00000319170 PABPN1Q86U42 306 aaKnown RBP eCLIP19.2■□□□□ 0.66
RAPH1-202ENST00000319170 GLIPR1L2Q4G1C9 344 aa19.2■□□□□ 0.66
RAPH1-202ENST00000319170 FKBP8Q14318 412 aa19.17■□□□□ 0.66
RAPH1-202ENST00000319170 ZNF777Q9ULD5 760 aaPredicted RBP19.17■□□□□ 0.66
RAPH1-202ENST00000319170 P3H3Q8IVL6 736 aa19.17■□□□□ 0.66
RAPH1-202ENST00000319170 ARXQ96QS3 562 aa19.16■□□□□ 0.66
RAPH1-202ENST00000319170 NBR1Q14596 966 aa19.15■□□□□ 0.66
RAPH1-202ENST00000319170 ABCC9O60706 1549 aa19.13■□□□□ 0.65
RAPH1-202ENST00000319170 PLPPR3Q6T4P5 718 aa19.09■□□□□ 0.65
RAPH1-202ENST00000319170 ESF1Q9H501 851 aaKnown RBP19.08■□□□□ 0.64
RAPH1-202ENST00000319170 STAG3Q9UJ98 1225 aa19.07■□□□□ 0.64
RAPH1-202ENST00000319170 TONSLQ96HA7 1378 aa19.05■□□□□ 0.64
RAPH1-202ENST00000319170 FAM9BQ8IZU0 186 aa19.05■□□□□ 0.64
RAPH1-202ENST00000319170 HNRNPUQ00839 825 aaKnown RBP eCLIP19.04■□□□□ 0.64
RAPH1-202ENST00000319170 SALL2Q9Y467 1007 aaPredicted RBP19.03■□□□□ 0.64
RAPH1-202ENST00000319170 CHGAP10645 457 aaKnown RBP19.03■□□□□ 0.64
RAPH1-202ENST00000319170 CDK11BP21127 795 aaKnown RBP18.96■□□□□ 0.63
RAPH1-202ENST00000319170 CCDC136Q96JN2 1154 aa18.96■□□□□ 0.63
RAPH1-202ENST00000319170 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.95■□□□□ 0.62
RAPH1-202ENST00000319170 SCRIBQ14160 1630 aa18.91■□□□□ 0.62
RAPH1-202ENST00000319170 WDR43Q15061 677 aaKnown RBP eCLIP18.89■□□□□ 0.62
RAPH1-202ENST00000319170 DDX10Q13206 875 aaKnown RBP18.89■□□□□ 0.61
RAPH1-202ENST00000319170 MYH16Q9H6N6 1097 aa18.88■□□□□ 0.61
RAPH1-202ENST00000319170 TMC1Q8TDI8 760 aa18.88■□□□□ 0.61
RAPH1-202ENST00000319170 SCAF1Q9H7N4 1312 aaKnown RBP18.88■□□□□ 0.61
RAPH1-202ENST00000319170 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.82■□□□□ 0.68e-7■■■□□ 16.1
RAPH1-202ENST00000319170 A0A0G2JS52 829 aa18.82■□□□□ 0.6
RAPH1-202ENST00000319170 IRX6P78412 446 aaPredicted RBP18.79■□□□□ 0.6
RAPH1-202ENST00000319170 NCLP19338 710 aaKnown RBP18.74■□□□□ 0.59
RAPH1-202ENST00000319170 TRIM44Q96DX7 344 aaPredicted RBP18.74■□□□□ 0.59
RAPH1-202ENST00000319170 ZBTB7CA1YPR0 619 aa18.74■□□□□ 0.59
RAPH1-202ENST00000319170 BECN1Q14457 450 aa18.73■□□□□ 0.59
RAPH1-202ENST00000319170 KDM2AQ9Y2K7 1162 aa18.73■□□□□ 0.59
RAPH1-202ENST00000319170 CSRNP3Q8WYN3 585 aa18.73■□□□□ 0.59
RAPH1-202ENST00000319170 MRS2Q9HD23 443 aa18.72■□□□□ 0.59
RAPH1-202ENST00000319170 DDRGK1Q96HY6 314 aa18.71■□□□□ 0.59
RAPH1-202ENST00000319170 CHIC2Q9UKJ5 165 aa18.71■□□□□ 0.59
RAPH1-202ENST00000319170 PLEKHG5O94827 1062 aa18.68■□□□□ 0.58
RAPH1-202ENST00000319170 SENP3Q9H4L4 574 aaPredicted RBP18.67■□□□□ 0.58
RAPH1-202ENST00000319170 TPRNQ4KMQ1 711 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms