RNA–Protein interactions for RNA: ENST00000297267.13

FNDC1-201, Transcript of fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-201ENST00000297267 DCAF8L2P0C7V8 631 aa27.33■■□□□ 1.97
FNDC1-201ENST00000297267 EHMT2Q96KQ7 1210 aa26.2■■□□□ 1.79
FNDC1-201ENST00000297267 SUPT5HO00267 1087 aaKnown RBP26.01■■□□□ 1.75
FNDC1-201ENST00000297267 SHROOM4Q9ULL8 1493 aa25.77■■□□□ 1.72
FNDC1-201ENST00000297267 TTBK1Q5TCY1 1321 aaPredicted RBP25.21■■□□□ 1.63
FNDC1-201ENST00000297267 FAM9AQ8IZU1 332 aaPredicted RBP24.81■■□□□ 1.56
FNDC1-201ENST00000297267 RANGAP1P46060 587 aaPredicted RBP24.65■■□□□ 1.54
FNDC1-201ENST00000297267 PCGF6Q9BYE7 350 aa24.55■■□□□ 1.52
FNDC1-201ENST00000297267 NISCHQ9Y2I1 1504 aa24.55■■□□□ 1.52
FNDC1-201ENST00000297267 PPARGC1BQ86YN6 1023 aaKnown RBP24.19■■□□□ 1.46
FNDC1-201ENST00000297267 APLP2Q06481 763 aa24.12■■□□□ 1.45
FNDC1-201ENST00000297267 YTHDC1Q96MU7 727 aaKnown RBP24.08■■□□□ 1.45
FNDC1-201ENST00000297267 ATP1B4Q9UN42 357 aaPredicted RBP24.04■■□□□ 1.44
FNDC1-201ENST00000297267 PELP1Q8IZL8 1130 aaKnown RBP24.02■■□□□ 1.44
FNDC1-201ENST00000297267 CCER1Q8TC90 406 aaPredicted RBP23.85■■□□□ 1.41
FNDC1-201ENST00000297267 ERICH6Q7L0X2 663 aa23.76■■□□□ 1.39
FNDC1-201ENST00000297267 TRIM41Q8WV44 630 aa23.6■■□□□ 1.37
FNDC1-201ENST00000297267 CNGB1Q14028 1251 aaPredicted RBP23.51■■□□□ 1.35
FNDC1-201ENST00000297267 UBTFP17480 764 aaKnown RBP23.49■■□□□ 1.35
FNDC1-201ENST00000297267 CENPBP07199 599 aaPredicted RBP23.46■■□□□ 1.35
FNDC1-201ENST00000297267 MYT1Q01538 1121 aa23.43■■□□□ 1.34
FNDC1-201ENST00000297267 ITGAEP38570 1179 aa23.34■■□□□ 1.33
FNDC1-201ENST00000297267 POLR3GLQ9BT43 218 aa23.27■■□□□ 1.32
FNDC1-201ENST00000297267 LOC105371045A0A1W2PR82 267 aa23.26■■□□□ 1.31
FNDC1-201ENST00000297267 CHIC1Q5VXU3 224 aa23.15■■□□□ 1.3
FNDC1-201ENST00000297267 ZEB1P37275 1124 aaPredicted RBP23.07■■□□□ 1.28
FNDC1-201ENST00000297267 NEFLP07196 543 aa23.06■■□□□ 1.28
FNDC1-201ENST00000297267 HNRNPUL2Q1KMD3 747 aaKnown RBP22.98■■□□□ 1.27
FNDC1-201ENST00000297267 HRCP23327 699 aa22.89■■□□□ 1.26
FNDC1-201ENST00000297267 MYT1LQ9UL68 1186 aa22.87■■□□□ 1.25
FNDC1-201ENST00000297267 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.83■■□□□ 1.25
FNDC1-201ENST00000297267 TRIM26Q12899 539 aaPredicted RBP22.82■■□□□ 1.24
FNDC1-201ENST00000297267 SLC4A1APQ9BWU0 796 aaKnown RBP22.68■■□□□ 1.22
FNDC1-201ENST00000297267 BCANQ96GW7 911 aa22.68■■□□□ 1.22
FNDC1-201ENST00000297267 DAXXQ9UER7 740 aaPredicted RBP22.52■■□□□ 1.19
FNDC1-201ENST00000297267 BCL11AQ9H165 835 aa22.47■■□□□ 1.19
FNDC1-201ENST00000297267 NEUROD1Q13562 356 aa22.46■■□□□ 1.19
FNDC1-201ENST00000297267 DIEXFQ68CQ4 756 aaKnown RBP22.41■■□□□ 1.18
FNDC1-201ENST00000297267 FAM50AQ14320 339 aaKnown RBP22.37■■□□□ 1.17
FNDC1-201ENST00000297267 GTF3C3Q9Y5Q9 886 aa22.27■■□□□ 1.16
FNDC1-201ENST00000297267 ZNF326Q5BKZ1 582 aaKnown RBP22.23■■□□□ 1.15
FNDC1-201ENST00000297267 ARID3CA6NKF2 412 aa22.22■■□□□ 1.15
FNDC1-201ENST00000297267 CLSPNQ9HAW4 1339 aa22.22■■□□□ 1.15
FNDC1-201ENST00000297267 TRIM52Q96A61 297 aa22.19■■□□□ 1.14
FNDC1-201ENST00000297267 PABPN1Q86U42 306 aaKnown RBP eCLIP22.19■■□□□ 1.14
FNDC1-201ENST00000297267 ZNF316A6NFI3 1004 aaPredicted RBP22.14■■□□□ 1.13
FNDC1-201ENST00000297267 P3H3Q8IVL6 736 aa22■■□□□ 1.11
FNDC1-201ENST00000297267 SLC24A1O60721 1099 aa21.99■■□□□ 1.11
FNDC1-201ENST00000297267 RTL5Q5HYW3 569 aaPredicted RBP21.98■■□□□ 1.11
FNDC1-201ENST00000297267 FBLN2P98095 1184 aa21.88■■□□□ 1.09
FNDC1-201ENST00000297267 NPM2Q86SE8 214 aaKnown RBP21.86■■□□□ 1.09
FNDC1-201ENST00000297267 PLPPR3Q6T4P5 718 aa21.79■■□□□ 1.08
FNDC1-201ENST00000297267 ABCC9O60706 1549 aa21.79■■□□□ 1.08
FNDC1-201ENST00000297267 SENP3Q9H4L4 574 aaPredicted RBP21.74■■□□□ 1.07
FNDC1-201ENST00000297267 ANP32CO43423 234 aa21.73■■□□□ 1.07
FNDC1-201ENST00000297267 SALL2Q9Y467 1007 aaPredicted RBP21.71■■□□□ 1.07
FNDC1-201ENST00000297267 SENP3-EIF4A1A0A087X0R7 540 aa21.68■■□□□ 1.06
FNDC1-201ENST00000297267 CDK11AQ9UQ88 783 aaPredicted RBP21.67■■□□□ 1.06
FNDC1-201ENST00000297267 CANXP27824 592 aaKnown RBP21.64■■□□□ 1.05
FNDC1-201ENST00000297267 ZNF777Q9ULD5 760 aaPredicted RBP21.63■■□□□ 1.05
FNDC1-201ENST00000297267 ARXQ96QS3 562 aa21.58■■□□□ 1.04
FNDC1-201ENST00000297267 HIRIP3Q9BW71 556 aaPredicted RBP21.57■■□□□ 1.04
FNDC1-201ENST00000297267 ACIN1Q9UKV3 1341 aaKnown RBP21.56■■□□□ 1.04
FNDC1-201ENST00000297267 FKBP8Q14318 412 aa21.56■■□□□ 1.04
FNDC1-201ENST00000297267 IRX6P78412 446 aaPredicted RBP21.55■■□□□ 1.04
FNDC1-201ENST00000297267 NBR1Q14596 966 aa21.49■■□□□ 1.03
FNDC1-201ENST00000297267 FAM9BQ8IZU0 186 aa21.45■■□□□ 1.03
FNDC1-201ENST00000297267 EIF5BO60841 1220 aaKnown RBP21.41■■□□□ 1.02
FNDC1-201ENST00000297267 PLEKHG5O94827 1062 aa21.41■■□□□ 1.02
FNDC1-201ENST00000297267 DDX10Q13206 875 aaKnown RBP21.4■■□□□ 1.02
FNDC1-201ENST00000297267 ZBTB47Q9UFB7 747 aaPredicted RBP21.39■■□□□ 1.02
FNDC1-201ENST00000297267 CHGAP10645 457 aaKnown RBP21.34■■□□□ 1.01
FNDC1-201ENST00000297267 CHIC2Q9UKJ5 165 aa21.33■■□□□ 1.01
FNDC1-201ENST00000297267 HNRNPUQ00839 825 aaKnown RBP eCLIP21.29■■□□□ 1
FNDC1-201ENST00000297267 SCAF1Q9H7N4 1312 aaKnown RBP21.26■□□□□ 0.99
FNDC1-201ENST00000297267 ANP32AP39687 249 aaKnown RBP21.26■□□□□ 0.99
FNDC1-201ENST00000297267 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.23■□□□□ 0.99
FNDC1-201ENST00000297267 SCRIBQ14160 1630 aa21.21■□□□□ 0.99
FNDC1-201ENST00000297267 KDM2AQ9Y2K7 1162 aa21.19■□□□□ 0.98
FNDC1-201ENST00000297267 MIER1Q8N108 512 aa21.15■□□□□ 0.98
FNDC1-201ENST00000297267 TPRNQ4KMQ1 711 aa21.1■□□□□ 0.97
FNDC1-201ENST00000297267 CSRNP3Q8WYN3 585 aa21.08■□□□□ 0.97
FNDC1-201ENST00000297267 HSP90AA1P07900 732 aaKnown RBP21.06■□□□□ 0.96
FNDC1-201ENST00000297267 ZBTB7CA1YPR0 619 aa21.06■□□□□ 0.96
FNDC1-201ENST00000297267 MYO15BQ96JP2 1530 aa21.06■□□□□ 0.96
FNDC1-201ENST00000297267 NEFMP07197 916 aa21.04■□□□□ 0.96
FNDC1-201ENST00000297267 TONSLQ96HA7 1378 aa21.01■□□□□ 0.95
FNDC1-201ENST00000297267 STAG3Q9UJ98 1225 aa21■□□□□ 0.95
FNDC1-201ENST00000297267 A0A0G2JS52 829 aa20.97■□□□□ 0.95
FNDC1-201ENST00000297267 CCDC136Q96JN2 1154 aa20.94■□□□□ 0.94
FNDC1-201ENST00000297267 RRP7BPQ9NSQ0 103 aa20.89■□□□□ 0.94
FNDC1-201ENST00000297267 TMC1Q8TDI8 760 aa20.89■□□□□ 0.94
FNDC1-201ENST00000297267 RTN4Q9NQC3 1192 aaKnown RBP20.89■□□□□ 0.93
FNDC1-201ENST00000297267 MRS2Q9HD23 443 aa20.87■□□□□ 0.93
FNDC1-201ENST00000297267 TAOK2Q9UL54 1235 aa20.83■□□□□ 0.93
FNDC1-201ENST00000297267 ESF1Q9H501 851 aaKnown RBP20.78■□□□□ 0.92
FNDC1-201ENST00000297267 RGL3Q3MIN7 710 aa20.76■□□□□ 0.91
FNDC1-201ENST00000297267 WDR43Q15061 677 aaKnown RBP eCLIP20.76■□□□□ 0.91
FNDC1-201ENST00000297267 C14orf37Q86TY3 774 aa20.74■□□□□ 0.91
FNDC1-201ENST00000297267 ANP32BQ92688 251 aaKnown RBP20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms