RNA–Protein interactions for RNA: ENST00000269886.7

SH3GL1-201, Transcript of SH3 domain containing GRB2 like 1, endophilin A2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GL1, Length 2,516 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL1-201ENST00000269886 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP24.87■■□□□ 1.578e-7■■■■■ 185.6
SH3GL1-201ENST00000269886 SF3B1O75533 1304 aaKnown RBP eCLIP24.63■■□□□ 1.532e-6■■■■■ 136.2
SH3GL1-201ENST00000269886 UTP3Q9NQZ2 479 aaKnown RBP eCLIP26.04■■□□□ 1.768e-7■■■■■ 132.9
SH3GL1-201ENST00000269886 SF3A3Q12874 501 aaKnown RBP eCLIP25.73■■□□□ 1.711e-12■■■■■ 84
SH3GL1-201ENST00000269886 TARDBPQ13148 414 aaKnown RBP eCLIP22.8■■□□□ 1.241e-19■■■■■ 71.3
SH3GL1-201ENST00000269886 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP26.13■■□□□ 1.771e-6■■■■■ 57
SH3GL1-201ENST00000269886 AARSP49588 968 aaKnown RBP eCLIP26.6■■□□□ 1.858e-6■■■■■ 52.4
SH3GL1-201ENST00000269886 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.56■■□□□ 1.683e-8■■■■■ 50.2
SH3GL1-201ENST00000269886 PTBP1P26599 531 aaKnown RBP eCLIP22.28■■□□□ 1.168e-7■■■■■ 46.2
SH3GL1-201ENST00000269886 SERBP1Q8NC51 408 aaKnown RBP eCLIP24.61■■□□□ 1.531e-6■■■■■ 38.1
SH3GL1-201ENST00000269886 TBRG4Q969Z0 631 aaKnown RBP eCLIP23.89■■□□□ 1.411e-7■■■■■ 35.3
SH3GL1-201ENST00000269886 EFTUD2Q15029 972 aaKnown RBP eCLIP25.29■■□□□ 1.643e-8■■■■■ 34.7
SH3GL1-201ENST00000269886 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.63■■■□□ 2.816e-8■■■■■ 30.6
SH3GL1-201ENST00000269886 PCBP1Q15365 356 aaKnown RBP eCLIP24.6■■□□□ 1.531e-6■■■■■ 29.4
SH3GL1-201ENST00000269886 PCBP2Q15366 365 aaKnown RBP eCLIP23.7■■□□□ 1.383e-7■■■■■ 28.6
SH3GL1-201ENST00000269886 SF3B4Q15427 424 aaKnown RBP eCLIP22.63■■□□□ 1.218e-7■■■■■ 28.5
SH3GL1-201ENST00000269886 UPF1Q92900 1129 aaKnown RBP eCLIP24.91■■□□□ 1.582e-8■■■■■ 28.4
SH3GL1-201ENST00000269886 DKC1O60832 514 aaKnown RBP eCLIP25.6■■□□□ 1.692e-27■■■■■ 27.9
SH3GL1-201ENST00000269886 AKAP1Q92667 903 aaKnown RBP eCLIP22.16■■□□□ 1.143e-8■■■■■ 27.8
SH3GL1-201ENST00000269886 EWSR1Q01844 656 aaKnown RBP eCLIP20.65■□□□□ 0.91e-7■■■■■ 27.5
SH3GL1-201ENST00000269886 AQRO60306 1485 aaKnown RBP eCLIP34.81■■■■□ 3.164e-7■■■■■ 27.3
SH3GL1-201ENST00000269886 HNRNPKP61978 463 aaKnown RBP eCLIP21.58■■□□□ 1.045e-6■■■■□ 22.4
SH3GL1-201ENST00000269886 MATR3P43243 847 aaKnown RBP eCLIP26.6■■□□□ 1.855e-13■■■■□ 22
SH3GL1-201ENST00000269886 NONOQ15233 471 aaKnown RBP eCLIP26.97■■□□□ 1.912e-6■■■■□ 21.2
SH3GL1-201ENST00000269886 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.38■■□□□ 1.972e-8■■■■□ 21
SH3GL1-201ENST00000269886 PRPF4O43172 522 aaKnown RBP eCLIP25.3■■□□□ 1.646e-6■■■■□ 20.1
SH3GL1-201ENST00000269886 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP22.08■■□□□ 1.123e-7■■■■□ 19.8
SH3GL1-201ENST00000269886 BUD13Q9BRD0 619 aaKnown RBP eCLIP26.2■■□□□ 1.798e-8■■■■□ 19.8
SH3GL1-201ENST00000269886 EIF4G2P78344 907 aaKnown RBP eCLIP33.65■■■□□ 2.987e-8■■■■□ 19.8
SH3GL1-201ENST00000269886 METAP2P50579 478 aaKnown RBP eCLIP27.95■■■□□ 2.072e-11■■■□□ 18.2
SH3GL1-201ENST00000269886 SDAD1Q9NVU7 687 aaKnown RBP eCLIP24.85■■□□□ 1.571e-6■■■□□ 16.5
SH3GL1-201ENST00000269886 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.11■□□□□ 0.492e-7■■■□□ 15.9
SH3GL1-201ENST00000269886 AGGF1Q8N302 714 aaeCLIP25.11■■□□□ 1.611e-6■■■□□ 15.3
SH3GL1-201ENST00000269886 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.67■■■□□ 2.181e-6■■■□□ 14.8
SH3GL1-201ENST00000269886 SLTMQ9NWH9 1034 aaKnown RBP eCLIP25.87■■□□□ 1.731e-6■■□□□ 14.3
SH3GL1-201ENST00000269886 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP24.07■■□□□ 1.442e-6■■□□□ 13.9
SH3GL1-201ENST00000269886 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP28.66■■■□□ 2.181e-6■■□□□ 13.7
SH3GL1-201ENST00000269886 RBM22Q9NW64 420 aaKnown RBP eCLIP24.33■■□□□ 1.492e-6■■□□□ 13.7
SH3GL1-201ENST00000269886 YBX3P16989 372 aaKnown RBP eCLIP24.52■■□□□ 1.529e-9■■□□□ 13.6
SH3GL1-201ENST00000269886 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP25.55■■□□□ 1.682e-6■■□□□ 13.3
SH3GL1-201ENST00000269886 PABPC4Q13310 644 aaKnown RBP eCLIP26.48■■□□□ 1.831e-25■■□□□ 12.7
SH3GL1-201ENST00000269886 RPS3P23396 243 aaKnown RBP eCLIP23.59■■□□□ 1.375e-7■■□□□ 12.2
SH3GL1-201ENST00000269886 ZNF800Q2TB10 664 aaPredicted RBP eCLIP22.47■■□□□ 1.193e-7■■□□□ 11.8
SH3GL1-201ENST00000269886 LARP4Q71RC2 724 aaKnown RBP eCLIP24.11■■□□□ 1.452e-8■□□□□ 11.3
SH3GL1-201ENST00000269886 DDX24Q9GZR7 859 aaKnown RBP eCLIP28.05■■■□□ 2.083e-6■□□□□ 11.2
SH3GL1-201ENST00000269886 RBM15Q96T37 977 aaKnown RBP eCLIP25.5■■□□□ 1.672e-8■□□□□ 11.2
SH3GL1-201ENST00000269886 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.85■■□□□ 1.412e-13■□□□□ 10.4
SH3GL1-201ENST00000269886 HNRNPMP52272 730 aaKnown RBP eCLIP33.04■■■□□ 2.882e-6■□□□□ 10.2
SH3GL1-201ENST00000269886 HNRNPCP07910 306 aaKnown RBP eCLIP23.39■■□□□ 1.335e-10■□□□□ 10.1
SH3GL1-201ENST00000269886 PPIGQ13427 754 aaKnown RBP eCLIP23.12■■□□□ 1.293e-7■□□□□ 9.8
SH3GL1-201ENST00000269886 DDX3XO00571 662 aaKnown RBP eCLIP26.26■■□□□ 1.793e-21■□□□□ 9.7
SH3GL1-201ENST00000269886 SRSF7Q16629 238 aaKnown RBP eCLIP20.57■□□□□ 0.884e-7■□□□□ 9.5
SH3GL1-201ENST00000269886 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.66■■■■□ 3.146e-7■□□□□ 9.5
SH3GL1-201ENST00000269886 ZNF622Q969S3 477 aaKnown RBP eCLIP26.34■■□□□ 1.815e-7■□□□□ 9
SH3GL1-201ENST00000269886 NIPBLQ6KC79 2804 aaeCLIP17.25■□□□□ 0.356e-6■□□□□ 9
SH3GL1-201ENST00000269886 SRSF1Q07955 248 aaKnown RBP eCLIP18.21■□□□□ 0.515e-6■□□□□ 9
SH3GL1-201ENST00000269886 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP27.48■■□□□ 1.991e-6■□□□□ 8.9
SH3GL1-201ENST00000269886 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.66■■■□□ 2.826e-6■□□□□ 8.3
Retrieved 58 of 58 RNA–protein pairs in 13 ms