RNA–Protein interactions for RNA: ENST00000261854.9

SPPL2A-201, Transcript of signal peptide peptidase like 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPPL2A, Length 7,372 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL2A-201ENST00000261854 DCAF8L2P0C7V8 631 aa24.7■■□□□ 1.54
SPPL2A-201ENST00000261854 EHMT2Q96KQ7 1210 aa23■■□□□ 1.27
SPPL2A-201ENST00000261854 SUPT5HO00267 1087 aaKnown RBP22.87■■□□□ 1.25
SPPL2A-201ENST00000261854 SHROOM4Q9ULL8 1493 aa22.38■■□□□ 1.17
SPPL2A-201ENST00000261854 PELP1Q8IZL8 1130 aaKnown RBP22.37■■□□□ 1.17
SPPL2A-201ENST00000261854 APLP2Q06481 763 aa22.18■■□□□ 1.14
SPPL2A-201ENST00000261854 TTBK1Q5TCY1 1321 aaPredicted RBP22.14■■□□□ 1.13
SPPL2A-201ENST00000261854 FAM9AQ8IZU1 332 aaPredicted RBP22.06■■□□□ 1.12
SPPL2A-201ENST00000261854 RANGAP1P46060 587 aaPredicted RBP21.93■■□□□ 1.1
SPPL2A-201ENST00000261854 ERICH6Q7L0X2 663 aa21.92■■□□□ 1.1
SPPL2A-201ENST00000261854 ATP1B4Q9UN42 357 aaPredicted RBP21.83■■□□□ 1.09
SPPL2A-201ENST00000261854 PCGF6Q9BYE7 350 aa21.54■■□□□ 1.04
SPPL2A-201ENST00000261854 MYT1Q01538 1121 aa21.44■■□□□ 1.02
SPPL2A-201ENST00000261854 CCER1Q8TC90 406 aaPredicted RBP21.43■■□□□ 1.02
SPPL2A-201ENST00000261854 MYT1LQ9UL68 1186 aa21.25■□□□□ 0.99
SPPL2A-201ENST00000261854 NISCHQ9Y2I1 1504 aa21.17■□□□□ 0.98
SPPL2A-201ENST00000261854 YTHDC1Q96MU7 727 aaKnown RBP21.14■□□□□ 0.97
SPPL2A-201ENST00000261854 CHIC1Q5VXU3 224 aa21.13■□□□□ 0.97
SPPL2A-201ENST00000261854 UBTFP17480 764 aaKnown RBP21.11■□□□□ 0.97
SPPL2A-201ENST00000261854 CENPBP07199 599 aaPredicted RBP21.07■□□□□ 0.96
SPPL2A-201ENST00000261854 NEFLP07196 543 aa21.03■□□□□ 0.96
SPPL2A-201ENST00000261854 POLR3GLQ9BT43 218 aa21.01■□□□□ 0.95
SPPL2A-201ENST00000261854 TRIM41Q8WV44 630 aa20.98■□□□□ 0.95
SPPL2A-201ENST00000261854 CNGB1Q14028 1251 aaPredicted RBP20.97■□□□□ 0.95
SPPL2A-201ENST00000261854 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.92■□□□□ 0.94
SPPL2A-201ENST00000261854 HNRNPUL2Q1KMD3 747 aaKnown RBP20.92■□□□□ 0.94
SPPL2A-201ENST00000261854 PPARGC1BQ86YN6 1023 aaKnown RBP20.9■□□□□ 0.94
SPPL2A-201ENST00000261854 DAXXQ9UER7 740 aaPredicted RBP20.89■□□□□ 0.93
SPPL2A-201ENST00000261854 SLC4A1APQ9BWU0 796 aaKnown RBP20.84■□□□□ 0.93
SPPL2A-201ENST00000261854 ITGAEP38570 1179 aa20.77■□□□□ 0.91
SPPL2A-201ENST00000261854 ZEB1P37275 1124 aaPredicted RBP20.66■□□□□ 0.9
SPPL2A-201ENST00000261854 CLSPNQ9HAW4 1339 aa20.4■□□□□ 0.86
SPPL2A-201ENST00000261854 BCL11AQ9H165 835 aa20.38■□□□□ 0.85
SPPL2A-201ENST00000261854 ZNF316A6NFI3 1004 aaPredicted RBP20.33■□□□□ 0.85
SPPL2A-201ENST00000261854 SLC24A1O60721 1099 aa20.32■□□□□ 0.84
SPPL2A-201ENST00000261854 BCANQ96GW7 911 aa20.1■□□□□ 0.81
SPPL2A-201ENST00000261854 RTL5Q5HYW3 569 aaPredicted RBP20.07■□□□□ 0.8
SPPL2A-201ENST00000261854 FAM50AQ14320 339 aaKnown RBP20.02■□□□□ 0.8
SPPL2A-201ENST00000261854 TRIM52Q96A61 297 aa20.01■□□□□ 0.79
SPPL2A-201ENST00000261854 ZBTB47Q9UFB7 747 aaPredicted RBP19.97■□□□□ 0.79
SPPL2A-201ENST00000261854 TRIM26Q12899 539 aaPredicted RBP19.97■□□□□ 0.79
SPPL2A-201ENST00000261854 ZNF326Q5BKZ1 582 aaKnown RBP19.95■□□□□ 0.78
SPPL2A-201ENST00000261854 FBLN2P98095 1184 aa19.94■□□□□ 0.78
SPPL2A-201ENST00000261854 PLPPR3Q6T4P5 718 aa19.94■□□□□ 0.78
SPPL2A-201ENST00000261854 NEUROD1Q13562 356 aa19.9■□□□□ 0.78
SPPL2A-201ENST00000261854 LOC105371045A0A1W2PR82 267 aa19.88■□□□□ 0.77
SPPL2A-201ENST00000261854 HRCP23327 699 aa19.82■□□□□ 0.76
SPPL2A-201ENST00000261854 CANXP27824 592 aaKnown RBP19.76■□□□□ 0.75
SPPL2A-201ENST00000261854 ARID3CA6NKF2 412 aa19.69■□□□□ 0.74
SPPL2A-201ENST00000261854 NEFMP07197 916 aa19.67■□□□□ 0.74
SPPL2A-201ENST00000261854 PABPN1Q86U42 306 aaKnown RBP eCLIP19.64■□□□□ 0.73
SPPL2A-201ENST00000261854 DIEXFQ68CQ4 756 aaKnown RBP19.58■□□□□ 0.73
SPPL2A-201ENST00000261854 ESF1Q9H501 851 aaKnown RBP19.57■□□□□ 0.72
SPPL2A-201ENST00000261854 A0A0G2JS52 829 aa19.5■□□□□ 0.71
SPPL2A-201ENST00000261854 ANP32CO43423 234 aa19.49■□□□□ 0.71
SPPL2A-201ENST00000261854 STAG3Q9UJ98 1225 aa19.49■□□□□ 0.71
SPPL2A-201ENST00000261854 SCAF1Q9H7N4 1312 aaKnown RBP19.48■□□□□ 0.71
SPPL2A-201ENST00000261854 ZNF777Q9ULD5 760 aaPredicted RBP19.47■□□□□ 0.71
SPPL2A-201ENST00000261854 CHGAP10645 457 aaKnown RBP19.46■□□□□ 0.71
SPPL2A-201ENST00000261854 NPM2Q86SE8 214 aaKnown RBP19.46■□□□□ 0.71
SPPL2A-201ENST00000261854 P3H3Q8IVL6 736 aa19.45■□□□□ 0.7
SPPL2A-201ENST00000261854 CDK11AQ9UQ88 783 aaPredicted RBP19.43■□□□□ 0.7
SPPL2A-201ENST00000261854 PLEKHG5O94827 1062 aa19.4■□□□□ 0.7
SPPL2A-201ENST00000261854 EIF5BO60841 1220 aaKnown RBP19.39■□□□□ 0.69
SPPL2A-201ENST00000261854 HSP90AA1P07900 732 aaKnown RBP19.34■□□□□ 0.69
SPPL2A-201ENST00000261854 ARXQ96QS3 562 aa19.3■□□□□ 0.68
SPPL2A-201ENST00000261854 ABCC9O60706 1549 aa19.29■□□□□ 0.68
SPPL2A-201ENST00000261854 SENP3Q9H4L4 574 aaPredicted RBP19.28■□□□□ 0.68
SPPL2A-201ENST00000261854 TULP1O00294 542 aaPredicted RBP19.24■□□□□ 0.67
SPPL2A-201ENST00000261854 ANP32BQ92688 251 aaKnown RBP19.23■□□□□ 0.67
SPPL2A-201ENST00000261854 ZBTB7CA1YPR0 619 aa19.22■□□□□ 0.67
SPPL2A-201ENST00000261854 SALL2Q9Y467 1007 aaPredicted RBP19.22■□□□□ 0.67
SPPL2A-201ENST00000261854 GTF3C3Q9Y5Q9 886 aa19.17■□□□□ 0.66
SPPL2A-201ENST00000261854 ANP32AP39687 249 aaKnown RBP19.16■□□□□ 0.66
SPPL2A-201ENST00000261854 NPM1P06748 294 aaKnown RBP eCLIP19.14■□□□□ 0.66
SPPL2A-201ENST00000261854 CDK11BP21127 795 aaKnown RBP19.12■□□□□ 0.65
SPPL2A-201ENST00000261854 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.12■□□□□ 0.65
SPPL2A-201ENST00000261854 C14orf37Q86TY3 774 aa19.09■□□□□ 0.65
SPPL2A-201ENST00000261854 NCBP3Q53F19 620 aaKnown RBP19.03■□□□□ 0.64
SPPL2A-201ENST00000261854 UPF2Q9HAU5 1272 aaKnown RBP19.02■□□□□ 0.63
SPPL2A-201ENST00000261854 FAM9BQ8IZU0 186 aa18.98■□□□□ 0.63
SPPL2A-201ENST00000261854 NBR1Q14596 966 aa18.97■□□□□ 0.63
SPPL2A-201ENST00000261854 HAP1P54257 671 aaPredicted RBP18.95■□□□□ 0.62
SPPL2A-201ENST00000261854 TPRNQ4KMQ1 711 aa18.94■□□□□ 0.62
SPPL2A-201ENST00000261854 KDM2AQ9Y2K7 1162 aa18.92■□□□□ 0.62
SPPL2A-201ENST00000261854 TAOK2Q9UL54 1235 aa18.9■□□□□ 0.62
SPPL2A-201ENST00000261854 CHIC2Q9UKJ5 165 aa18.87■□□□□ 0.61
SPPL2A-201ENST00000261854 HNRNPUQ00839 825 aaKnown RBP eCLIP18.85■□□□□ 0.61
SPPL2A-201ENST00000261854 FKBP8Q14318 412 aa18.84■□□□□ 0.61
SPPL2A-201ENST00000261854 WDR43Q15061 677 aaKnown RBP eCLIP18.84■□□□□ 0.61
SPPL2A-201ENST00000261854 TONSLQ96HA7 1378 aa18.82■□□□□ 0.6
SPPL2A-201ENST00000261854 TMC1Q8TDI8 760 aa18.81■□□□□ 0.6
SPPL2A-201ENST00000261854 ARID4BQ4LE39 1312 aaPredicted RBP18.8■□□□□ 0.6
SPPL2A-201ENST00000261854 NPHP1O15259 732 aa18.79■□□□□ 0.6
SPPL2A-201ENST00000261854 PPP1R15AO75807 674 aaPredicted RBP18.79■□□□□ 0.6
SPPL2A-201ENST00000261854 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.79■□□□□ 0.6
SPPL2A-201ENST00000261854 MYH16Q9H6N6 1097 aa18.78■□□□□ 0.6
SPPL2A-201ENST00000261854 DDX10Q13206 875 aaKnown RBP18.75■□□□□ 0.59
SPPL2A-201ENST00000261854 GLIPR1L2Q4G1C9 344 aa18.75■□□□□ 0.59
SPPL2A-201ENST00000261854 LMOD2Q6P5Q4 547 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 128 ms