RNA–Protein interactions for RNA: ENST00000258148.11

MDM2-201, Transcript of MDM2 proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MDM2, Length 1,361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-201ENST00000258148 CHIC1Q5VXU3 224 aa19.84■□□□□ 0.77
MDM2-201ENST00000258148 AEBP2Q6ZN18 517 aaPredicted RBP19.35■□□□□ 0.69
MDM2-201ENST00000258148 PHF23Q9BUL5 403 aaPredicted RBP17.64■□□□□ 0.41
MDM2-201ENST00000258148 PLPPR3Q6T4P5 718 aa16.51■□□□□ 0.23
MDM2-201ENST00000258148 SENP3Q9H4L4 574 aaPredicted RBP16.11■□□□□ 0.17
MDM2-201ENST00000258148 EHMT2Q96KQ7 1210 aa15.76■□□□□ 0.11
MDM2-201ENST00000258148 KCNA4P22459 653 aa15.61■□□□□ 0.09
MDM2-201ENST00000258148 ADRA2BP18089 450 aa15.54■□□□□ 0.08
MDM2-201ENST00000258148 PPP6R1Q9UPN7 881 aa15.21■□□□□ 0.02
MDM2-201ENST00000258148 CSRNP3Q8WYN3 585 aa15.17■□□□□ 0.02
MDM2-201ENST00000258148 SLC4A1APQ9BWU0 796 aaKnown RBP14.98□□□□□ -0.01
MDM2-201ENST00000258148 FOXD1Q16676 465 aa14.92□□□□□ -0.02
MDM2-201ENST00000258148 PPP4R3CPQ6ZMV5 832 aa14.72□□□□□ -0.05
MDM2-201ENST00000258148 SLC24A1O60721 1099 aa14.53□□□□□ -0.08
MDM2-201ENST00000258148 NCBP3Q53F19 620 aaKnown RBP14.53□□□□□ -0.08
MDM2-201ENST00000258148 ZBTB22O15209 634 aa14.46□□□□□ -0.1
MDM2-201ENST00000258148 NPM3O75607 178 aaKnown RBP14.45□□□□□ -0.1
MDM2-201ENST00000258148 RTN4Q9NQC3 1192 aaKnown RBP14.28□□□□□ -0.12
MDM2-201ENST00000258148 PIAS4Q8N2W9 510 aaPredicted RBP14.25□□□□□ -0.13
MDM2-201ENST00000258148 AMER1Q5JTC6 1135 aaPredicted RBP14.18□□□□□ -0.14
MDM2-201ENST00000258148 CNKSR2Q8WXI2 1034 aa14.04□□□□□ -0.16
MDM2-201ENST00000258148 FOXD4L1Q9NU39 408 aa14□□□□□ -0.17
MDM2-201ENST00000258148 DNAJC5BQ9UF47 199 aa13.92□□□□□ -0.18
MDM2-201ENST00000258148 SCAF1Q9H7N4 1312 aaKnown RBP13.75□□□□□ -0.21
MDM2-201ENST00000258148 FKBP8Q14318 412 aa13.57□□□□□ -0.24
MDM2-201ENST00000258148 RNF216Q9NWF9 866 aaPredicted RBP13.53□□□□□ -0.24
MDM2-201ENST00000258148 MAPK8IP2Q13387 824 aaPredicted RBP13.5□□□□□ -0.25
MDM2-201ENST00000258148 SLC4A2P04920 1241 aa13.44□□□□□ -0.26
MDM2-201ENST00000258148 ATXN8OSP0DMR3 200 aa13.4□□□□□ -0.26
MDM2-201ENST00000258148 MYCNP04198 464 aaPredicted RBP13.27□□□□□ -0.29
MDM2-201ENST00000258148 HOXD11P31277 338 aaPredicted RBP13.24□□□□□ -0.29
MDM2-201ENST00000258148 MSH5O43196 834 aa13.23□□□□□ -0.29
MDM2-201ENST00000258148 DMRT2Q9Y5R5 561 aa13.07□□□□□ -0.32
MDM2-201ENST00000258148 PLCB2Q00722 1185 aa13.07□□□□□ -0.32
MDM2-201ENST00000258148 ATF5Q9Y2D1 282 aaPredicted RBP12.94□□□□□ -0.34
MDM2-201ENST00000258148 PRKCSHP14314 528 aaPredicted RBP12.87□□□□□ -0.35
MDM2-201ENST00000258148 HAP1P54257 671 aaPredicted RBP12.82□□□□□ -0.36
MDM2-201ENST00000258148 BCANQ96GW7 911 aa12.82□□□□□ -0.36
MDM2-201ENST00000258148 TAOK2Q9UL54 1235 aa12.78□□□□□ -0.36
MDM2-201ENST00000258148 FBXO3Q9UK99 471 aa12.72□□□□□ -0.37
MDM2-201ENST00000258148 VSIG10Q8N0Z9 540 aa12.69□□□□□ -0.38
MDM2-201ENST00000258148 VASPP50552 380 aaPredicted RBP12.62□□□□□ -0.39
MDM2-201ENST00000258148 SAMD1Q6SPF0 538 aaPredicted RBP12.62□□□□□ -0.39
MDM2-201ENST00000258148 PROM2Q8N271 834 aa12.62□□□□□ -0.39
MDM2-201ENST00000258148 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.57□□□□□ -0.4
MDM2-201ENST00000258148 HNRNPUL2Q1KMD3 747 aaKnown RBP12.57□□□□□ -0.4
MDM2-201ENST00000258148 DCAF8L2P0C7V8 631 aa12.56□□□□□ -0.4
MDM2-201ENST00000258148 PKD2Q13563 968 aa12.56□□□□□ -0.4
MDM2-201ENST00000258148 IFNLR1Q8IU57 520 aaPredicted RBP12.56□□□□□ -0.4
MDM2-201ENST00000258148 SPDYE4A6NLX3 237 aa12.56□□□□□ -0.4
MDM2-201ENST00000258148 TPRNQ4KMQ1 711 aa12.55□□□□□ -0.4
MDM2-201ENST00000258148 POTEDQ86YR6 584 aa12.55□□□□□ -0.4
MDM2-201ENST00000258148 U3KPZ7 1027 aaPredicted RBP12.55□□□□□ -0.4
MDM2-201ENST00000258148 KDM2AQ9Y2K7 1162 aa12.53□□□□□ -0.4
MDM2-201ENST00000258148 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.51□□□□□ -0.411e-8■■□□□ 11.6
MDM2-201ENST00000258148 ZNF219Q9P2Y4 722 aaPredicted RBP12.51□□□□□ -0.41
MDM2-201ENST00000258148 FBLN2P98095 1184 aa12.44□□□□□ -0.42
MDM2-201ENST00000258148 MKRN4PQ13434 485 aaPredicted RBP12.44□□□□□ -0.42
MDM2-201ENST00000258148 BBXQ8WY36 941 aaPredicted RBP12.38□□□□□ -0.43
MDM2-201ENST00000258148 NPM1P06748 294 aaKnown RBP eCLIP12.35□□□□□ -0.43
MDM2-201ENST00000258148 DCAF8L1A6NGE4 600 aa12.33□□□□□ -0.44
MDM2-201ENST00000258148 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.33□□□□□ -0.44
MDM2-201ENST00000258148 PAXIP1Q6ZW49 1069 aaPredicted RBP12.3□□□□□ -0.44
MDM2-201ENST00000258148 CFAP44Q96MT7 982 aa12.25□□□□□ -0.45
MDM2-201ENST00000258148 TIMELESSQ9UNS1 1208 aa12.21□□□□□ -0.45
MDM2-201ENST00000258148 TSHZ2Q9NRE2 1034 aa12.2□□□□□ -0.46
MDM2-201ENST00000258148 ECM2O94769 699 aaPredicted RBP12.19□□□□□ -0.46
MDM2-201ENST00000258148 APLP2Q06481 763 aa12.16□□□□□ -0.46
MDM2-201ENST00000258148 SPOCK2Q92563 424 aa12.16□□□□□ -0.46
MDM2-201ENST00000258148 RGL2O15211 777 aa12.13□□□□□ -0.47
MDM2-201ENST00000258148 SPRYD3Q8NCJ5 442 aa12.13□□□□□ -0.47
MDM2-201ENST00000258148 DNAJC5Q9H3Z4 198 aa12.12□□□□□ -0.47
MDM2-201ENST00000258148 TULP1O00294 542 aaPredicted RBP12.09□□□□□ -0.47
MDM2-201ENST00000258148 KLHL34Q8N239 644 aa12.05□□□□□ -0.48
MDM2-201ENST00000258148 GTF3C3Q9Y5Q9 886 aa12□□□□□ -0.49
MDM2-201ENST00000258148 NBR1Q14596 966 aa11.99□□□□□ -0.49
MDM2-201ENST00000258148 ARXQ96QS3 562 aa11.97□□□□□ -0.49
MDM2-201ENST00000258148 DAXXQ9UER7 740 aaPredicted RBP11.97□□□□□ -0.49
MDM2-201ENST00000258148 POLA2Q14181 598 aa11.96□□□□□ -0.49
MDM2-201ENST00000258148 CHGAP10645 457 aaKnown RBP11.92□□□□□ -0.5
MDM2-201ENST00000258148 SPINK5Q9NQ38 1064 aaPredicted RBP11.88□□□□□ -0.51
MDM2-201ENST00000258148 TRHP20396 242 aaPredicted RBP11.87□□□□□ -0.51
MDM2-201ENST00000258148 STAG3Q9UJ98 1225 aa11.87□□□□□ -0.51
MDM2-201ENST00000258148 ERICH6Q7L0X2 663 aa11.84□□□□□ -0.51
MDM2-201ENST00000258148 HS6ST3Q8IZP7 471 aa11.83□□□□□ -0.52
MDM2-201ENST00000258148 PLCD3Q8N3E9 789 aa11.83□□□□□ -0.52
MDM2-201ENST00000258148 TMEM132AQ24JP5 1023 aa11.79□□□□□ -0.52
MDM2-201ENST00000258148 ZBTB12Q9Y330 459 aaPredicted RBP11.77□□□□□ -0.53
MDM2-201ENST00000258148 CIZ1Q9ULV3 898 aaPredicted RBP11.75□□□□□ -0.53
MDM2-201ENST00000258148 MIER1Q8N108 512 aa11.73□□□□□ -0.53
MDM2-201ENST00000258148 NKX1-1Q15270 411 aaPredicted RBP11.72□□□□□ -0.53
MDM2-201ENST00000258148 RNF25Q96BH1 459 aaPredicted RBP11.71□□□□□ -0.53
MDM2-201ENST00000258148 TRIM41Q8WV44 630 aa11.69□□□□□ -0.54
MDM2-201ENST00000258148 SSUH2Q9Y2M2 353 aa11.68□□□□□ -0.54
MDM2-201ENST00000258148 CAPN15O75808 1086 aa11.67□□□□□ -0.54
MDM2-201ENST00000258148 HOMEZQ8IX15 550 aa11.67□□□□□ -0.54
MDM2-201ENST00000258148 ZNF692Q9BU19 519 aaPredicted RBP11.67□□□□□ -0.54
MDM2-201ENST00000258148 GTPBP6O43824 516 aaPredicted RBP11.66□□□□□ -0.54
MDM2-201ENST00000258148 C14orf37Q86TY3 774 aa11.63□□□□□ -0.55
MDM2-201ENST00000258148 ABCB7O75027 752 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms