RNA–Protein interactions for RNA: ENST00000252458.6

CDC16-202, Transcript of cell division cycle 16, humanhuman

TSL 1 (best) BASIC

Gene CDC16, Length 1,991 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC16-202ENST00000252458 CHIC1Q5VXU3 224 aa20.33■□□□□ 0.84
CDC16-202ENST00000252458 AEBP2Q6ZN18 517 aaPredicted RBP20.08■□□□□ 0.81
CDC16-202ENST00000252458 PHF23Q9BUL5 403 aaPredicted RBP18■□□□□ 0.47
CDC16-202ENST00000252458 SENP3Q9H4L4 574 aaPredicted RBP17■□□□□ 0.31
CDC16-202ENST00000252458 PLPPR3Q6T4P5 718 aa16.89■□□□□ 0.29
CDC16-202ENST00000252458 ADRA2BP18089 450 aa15.86■□□□□ 0.13
CDC16-202ENST00000252458 EHMT2Q96KQ7 1210 aa15.8■□□□□ 0.12
CDC16-202ENST00000252458 KCNA4P22459 653 aa15.74■□□□□ 0.11
CDC16-202ENST00000252458 FOXD1Q16676 465 aa15.66■□□□□ 0.1
CDC16-202ENST00000252458 PPP6R1Q9UPN7 881 aa15.61■□□□□ 0.09
CDC16-202ENST00000252458 CSRNP3Q8WYN3 585 aa15.15■□□□□ 0.02
CDC16-202ENST00000252458 SLC4A1APQ9BWU0 796 aaKnown RBP15.12■□□□□ 0.01
CDC16-202ENST00000252458 PPP4R3CPQ6ZMV5 832 aa15.02□□□□□ -0.01
CDC16-202ENST00000252458 PIAS4Q8N2W9 510 aaPredicted RBP14.96□□□□□ -0.01
CDC16-202ENST00000252458 NCBP3Q53F19 620 aaKnown RBP14.85□□□□□ -0.03
CDC16-202ENST00000252458 NPM3O75607 178 aaKnown RBP14.68□□□□□ -0.06
CDC16-202ENST00000252458 ZBTB22O15209 634 aa14.51□□□□□ -0.09
CDC16-202ENST00000252458 SCAF1Q9H7N4 1312 aaKnown RBP14.38□□□□□ -0.11
CDC16-202ENST00000252458 CNKSR2Q8WXI2 1034 aa14.37□□□□□ -0.11
CDC16-202ENST00000252458 MSH5O43196 834 aa14.22□□□□□ -0.13
CDC16-202ENST00000252458 FOXD4L1Q9NU39 408 aa14.17□□□□□ -0.14
CDC16-202ENST00000252458 SLC24A1O60721 1099 aa14.14□□□□□ -0.15
CDC16-202ENST00000252458 RTN4Q9NQC3 1192 aaKnown RBP14.05□□□□□ -0.16
CDC16-202ENST00000252458 DNAJC5BQ9UF47 199 aa14.01□□□□□ -0.17
CDC16-202ENST00000252458 AMER1Q5JTC6 1135 aaPredicted RBP13.99□□□□□ -0.17
CDC16-202ENST00000252458 MAPK8IP2Q13387 824 aaPredicted RBP13.96□□□□□ -0.18
CDC16-202ENST00000252458 RNF216Q9NWF9 866 aaPredicted RBP13.91□□□□□ -0.18
CDC16-202ENST00000252458 DMRT2Q9Y5R5 561 aa13.66□□□□□ -0.22
CDC16-202ENST00000252458 HOXD11P31277 338 aaPredicted RBP13.65□□□□□ -0.22
CDC16-202ENST00000252458 FKBP8Q14318 412 aa13.65□□□□□ -0.22
CDC16-202ENST00000252458 SLC4A2P04920 1241 aa13.65□□□□□ -0.22
CDC16-202ENST00000252458 ATXN8OSP0DMR3 200 aa13.55□□□□□ -0.24
CDC16-202ENST00000252458 MYCNP04198 464 aaPredicted RBP13.51□□□□□ -0.25
CDC16-202ENST00000252458 ATF5Q9Y2D1 282 aaPredicted RBP13.16□□□□□ -0.3
CDC16-202ENST00000252458 DCAF8L1A6NGE4 600 aa13.07□□□□□ -0.32
CDC16-202ENST00000252458 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.04□□□□□ -0.324e-8■■■□□ 16.4
CDC16-202ENST00000252458 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.02□□□□□ -0.32
CDC16-202ENST00000252458 HNRNPUL2Q1KMD3 747 aaKnown RBP13.02□□□□□ -0.32
CDC16-202ENST00000252458 SAMD1Q6SPF0 538 aaPredicted RBP12.98□□□□□ -0.33
CDC16-202ENST00000252458 PLCB2Q00722 1185 aa12.9□□□□□ -0.34
CDC16-202ENST00000252458 U3KPZ7 1027 aaPredicted RBP12.87□□□□□ -0.35
CDC16-202ENST00000252458 FBXO3Q9UK99 471 aa12.86□□□□□ -0.35
CDC16-202ENST00000252458 ZNF219Q9P2Y4 722 aaPredicted RBP12.78□□□□□ -0.36
CDC16-202ENST00000252458 SPDYE4A6NLX3 237 aa12.75□□□□□ -0.37
CDC16-202ENST00000252458 HAP1P54257 671 aaPredicted RBP12.74□□□□□ -0.37
CDC16-202ENST00000252458 APLP2Q06481 763 aa12.73□□□□□ -0.37
CDC16-202ENST00000252458 DCAF8L2P0C7V8 631 aa12.7□□□□□ -0.38
CDC16-202ENST00000252458 VASPP50552 380 aaPredicted RBP12.69□□□□□ -0.38
CDC16-202ENST00000252458 PROM2Q8N271 834 aa12.62□□□□□ -0.39
CDC16-202ENST00000252458 BCANQ96GW7 911 aa12.61□□□□□ -0.39
CDC16-202ENST00000252458 IFNLR1Q8IU57 520 aaPredicted RBP12.61□□□□□ -0.39
CDC16-202ENST00000252458 MKRN4PQ13434 485 aaPredicted RBP12.6□□□□□ -0.39
CDC16-202ENST00000252458 PRKCSHP14314 528 aaPredicted RBP12.57□□□□□ -0.4
CDC16-202ENST00000252458 PKD2Q13563 968 aa12.53□□□□□ -0.4
CDC16-202ENST00000252458 VSIG10Q8N0Z9 540 aa12.52□□□□□ -0.41
CDC16-202ENST00000252458 TAOK2Q9UL54 1235 aa12.5□□□□□ -0.41
CDC16-202ENST00000252458 FBLN2P98095 1184 aa12.47□□□□□ -0.41
CDC16-202ENST00000252458 TRHP20396 242 aaPredicted RBP12.36□□□□□ -0.43
CDC16-202ENST00000252458 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.36□□□□□ -0.43
CDC16-202ENST00000252458 KDM2AQ9Y2K7 1162 aa12.36□□□□□ -0.43
CDC16-202ENST00000252458 BBXQ8WY36 941 aaPredicted RBP12.34□□□□□ -0.43
CDC16-202ENST00000252458 POLA2Q14181 598 aa12.33□□□□□ -0.44
CDC16-202ENST00000252458 TPRNQ4KMQ1 711 aa12.32□□□□□ -0.44
CDC16-202ENST00000252458 PAXIP1Q6ZW49 1069 aaPredicted RBP12.31□□□□□ -0.44
CDC16-202ENST00000252458 SPINK5Q9NQ38 1064 aaPredicted RBP12.3□□□□□ -0.44
CDC16-202ENST00000252458 ECM2O94769 699 aaPredicted RBP12.29□□□□□ -0.44
CDC16-202ENST00000252458 KLHL34Q8N239 644 aa12.29□□□□□ -0.44
CDC16-202ENST00000252458 CFAP44Q96MT7 982 aa12.29□□□□□ -0.44
CDC16-202ENST00000252458 NPM1P06748 294 aaKnown RBP eCLIP12.28□□□□□ -0.44
CDC16-202ENST00000252458 SPOCK2Q92563 424 aa12.27□□□□□ -0.45
CDC16-202ENST00000252458 CAPN15O75808 1086 aa12.26□□□□□ -0.45
CDC16-202ENST00000252458 RNF39Q9H2S5 420 aa12.22□□□□□ -0.45
CDC16-202ENST00000252458 ZBTB12Q9Y330 459 aaPredicted RBP12.21□□□□□ -0.46
CDC16-202ENST00000252458 RGL2O15211 777 aa12.16□□□□□ -0.46
CDC16-202ENST00000252458 C1QBPQ07021 282 aaKnown RBP12.14□□□□□ -0.47
CDC16-202ENST00000252458 SPRYD3Q8NCJ5 442 aa12.14□□□□□ -0.47
CDC16-202ENST00000252458 TSHZ2Q9NRE2 1034 aa12.12□□□□□ -0.47
CDC16-202ENST00000252458 PLCD3Q8N3E9 789 aa12.1□□□□□ -0.47
CDC16-202ENST00000252458 STAG3Q9UJ98 1225 aa12.08□□□□□ -0.48
CDC16-202ENST00000252458 ABCB7O75027 752 aa12.06□□□□□ -0.48
CDC16-202ENST00000252458 CHGAP10645 457 aaKnown RBP12.02□□□□□ -0.49
CDC16-202ENST00000252458 ZNF692Q9BU19 519 aaPredicted RBP12.02□□□□□ -0.49
CDC16-202ENST00000252458 MIER1Q8N108 512 aa12.01□□□□□ -0.49
CDC16-202ENST00000252458 CIZ1Q9ULV3 898 aaPredicted RBP11.97□□□□□ -0.49
CDC16-202ENST00000252458 NBR1Q14596 966 aa11.95□□□□□ -0.5
CDC16-202ENST00000252458 SPDYE2BA6NHP3 402 aa11.91□□□□□ -0.5
CDC16-202ENST00000252458 SPDYE6P0CI01 402 aa11.91□□□□□ -0.5
CDC16-202ENST00000252458 SPDYE2Q495Y8 402 aa11.91□□□□□ -0.5
CDC16-202ENST00000252458 PABPN1Q86U42 306 aaKnown RBP eCLIP11.9□□□□□ -0.5
CDC16-202ENST00000252458 DNAJC5Q9H3Z4 198 aa11.9□□□□□ -0.5
CDC16-202ENST00000252458 SSUH2Q9Y2M2 353 aa11.89□□□□□ -0.51
CDC16-202ENST00000252458 OSCARQ8IYS5 282 aa11.87□□□□□ -0.51
CDC16-202ENST00000252458 DSG3P32926 999 aa11.87□□□□□ -0.51
CDC16-202ENST00000252458 PLEKHG5O94827 1062 aa11.84□□□□□ -0.51
CDC16-202ENST00000252458 ZBTB47Q9UFB7 747 aaPredicted RBP11.84□□□□□ -0.51
CDC16-202ENST00000252458 HS6ST3Q8IZP7 471 aa11.83□□□□□ -0.52
CDC16-202ENST00000252458 TRIM41Q8WV44 630 aa11.8□□□□□ -0.52
CDC16-202ENST00000252458 TIMELESSQ9UNS1 1208 aa11.79□□□□□ -0.52
CDC16-202ENST00000252458 TULP1O00294 542 aaPredicted RBP11.76□□□□□ -0.53
CDC16-202ENST00000252458 RNF25Q96BH1 459 aaPredicted RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms