RNA–Protein interactions for RNA: ENSMUST00000218228.1

Smarcc2-205, Transcript of SWI/SNF complex subunit SMARCC2, mousemouse

TSL 5 BASIC

Gene Smarcc2, Length 603 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2-205ENSMUST00000218228 Gm35339A0A140LHH9 1649 aa58.92■■■■■ 7.02
Smarcc2-205ENSMUST00000218228 NischQ80TM9 1593 aa57.75■■■■■ 6.84
Smarcc2-205ENSMUST00000218228 Abcc8B2RUS7 1588 aa56.13■■■■■ 6.58
Smarcc2-205ENSMUST00000218228 Abcc9P70170 1546 aa55.78■■■■■ 6.52
Smarcc2-205ENSMUST00000218228 ScribQ80U72 1612 aa54.68■■■■■ 6.34
Smarcc2-205ENSMUST00000218228 NacadQ5SWP3 1504 aa52.77■■■■■ 6.04
Smarcc2-205ENSMUST00000218228 Kdm5dQ62240 1548 aa52.61■■■■■ 6.01
Smarcc2-205ENSMUST00000218228 Sycp2Q9CUU3 1500 aa51.81■■■■■ 5.88
Smarcc2-205ENSMUST00000218228 Dcaf1Q80TR8 1506 aa51.43■■■■■ 5.82
Smarcc2-205ENSMUST00000218228 BicraF8VPZ9 1578 aa51.3■■■■■ 5.8
Smarcc2-205ENSMUST00000218228 Dnajc5bQ9CQ94 199 aa51.28■■■■■ 5.8
Smarcc2-205ENSMUST00000218228 Rb1cc1Q9ESK9 1588 aa50.22■■■■■ 5.63
Smarcc2-205ENSMUST00000218228 Pds5bQ4VA53 1446 aaKnown RBP49.94■■■■■ 5.59
Smarcc2-205ENSMUST00000218228 Thoc2B1AZI6 1594 aaKnown RBP49.9■■■■■ 5.58
Smarcc2-205ENSMUST00000218228 Crybg2B7ZCC2 1516 aa49.47■■■■■ 5.51
Smarcc2-205ENSMUST00000218228 Baz1aO88379 1555 aa49.45■■■■■ 5.51
Smarcc2-205ENSMUST00000218228 Atad2bE9Q166 1460 aaKnown RBP49.32■■■■■ 5.49
Smarcc2-205ENSMUST00000218228 Ccdc180J3QNE4 1664 aa49.31■■■■■ 5.48
Smarcc2-205ENSMUST00000218228 Cc2d2aQ8CFW7 1633 aa49.04■■■■■ 5.44
Smarcc2-205ENSMUST00000218228 Rhox8Q6VSS7 320 aa48.93■■■■■ 5.42
Smarcc2-205ENSMUST00000218228 Zcchc6Q5BLK4 1491 aaKnown RBP48.86■■■■■ 5.41
Smarcc2-205ENSMUST00000218228 Ercc6F8VPZ5 1481 aa48.78■■■■■ 5.4
Smarcc2-205ENSMUST00000218228 Smarca2Q6DIC0 1577 aa48.67■■■■■ 5.38
Smarcc2-205ENSMUST00000218228 Fam135aQ6NS59 1506 aa48.56■■■■■ 5.36
Smarcc2-205ENSMUST00000218228 Smarca4Q3TKT4 1613 aaKnown RBP48.54■■■■■ 5.36
Smarcc2-205ENSMUST00000218228 Iqgap2Q3UQ44 1575 aa48.41■■■■■ 5.34
Smarcc2-205ENSMUST00000218228 Cecr2E9Q2Z1 1453 aa48.24■■■■■ 5.31
Smarcc2-205ENSMUST00000218228 Wdr62Q3U3T8 1523 aa48.16■■■■■ 5.3
Smarcc2-205ENSMUST00000218228 Frmpd1A2AKB4 1549 aa48.13■■■■■ 5.3
Smarcc2-205ENSMUST00000218228 Phldb1Q6PDH0 1371 aaKnown RBP48.04■■■■■ 5.28
Smarcc2-205ENSMUST00000218228 Baz1bQ9Z277 1479 aa47.93■■■■■ 5.26
Smarcc2-205ENSMUST00000218228 Ubl4bQ9CQ84 188 aa47.65■■■■■ 5.22
Smarcc2-205ENSMUST00000218228 Unc13aQ4KUS2 1712 aa47.44■■■■■ 5.18
Smarcc2-205ENSMUST00000218228 Mrc2Q64449 1479 aa47.4■■■■■ 5.18
Smarcc2-205ENSMUST00000218228 Dnajc5P60904 198 aa47.2■■■■■ 5.15
Smarcc2-205ENSMUST00000218228 CftrP26361 1476 aa46.95■■■■■ 5.11
Smarcc2-205ENSMUST00000218228 Cttnbp2B9EJA2 1648 aa46.83■■■■■ 5.09
Smarcc2-205ENSMUST00000218228 Trim41Q5NCC3 630 aa46.78■■■■■ 5.08
Smarcc2-205ENSMUST00000218228 Synj1Q8CHC4 1574 aa46.73■■■■■ 5.07
Smarcc2-205ENSMUST00000218228 Brd4Q9ESU6 1400 aaKnown RBP46.49■■■■■ 5.03
Smarcc2-205ENSMUST00000218228 Lrriq1Q0P5X1 1673 aa46.45■■■■■ 5.03
Smarcc2-205ENSMUST00000218228 Rtl1Q7M732 1744 aa46.29■■■■■ 5
Smarcc2-205ENSMUST00000218228 Cux2P70298 1426 aa46.25■■■■■ 4.99
Smarcc2-205ENSMUST00000218228 Rsf1E9PWW9 1441 aaKnown RBP46.22■■■■■ 4.99
Smarcc2-205ENSMUST00000218228 Kif21aQ9QXL2 1672 aa46.08■■■■■ 4.97
Smarcc2-205ENSMUST00000218228 Ccdc136Q3TVA9 1136 aa46.06■■■■■ 4.96
Smarcc2-205ENSMUST00000218228 Kif15Q6P9L6 1387 aa46.06■■■■■ 4.96
Smarcc2-205ENSMUST00000218228 Esf1Q3V1V3 845 aaKnown RBP45.94■■■■■ 4.94
Smarcc2-205ENSMUST00000218228 Lamc3Q9R0B6 1581 aa45.75■■■■■ 4.91
Smarcc2-205ENSMUST00000218228 Shroom2A2ALU4 1481 aa45.74■■■■■ 4.91
Smarcc2-205ENSMUST00000218228 Eif4g3Q80XI3 1579 aaKnown RBP45.74■■■■■ 4.91
Smarcc2-205ENSMUST00000218228 Npm1Q61937 292 aaKnown RBP45.66■■■■■ 4.9
Smarcc2-205ENSMUST00000218228 Cep164Q5DU05 1446 aa45.43■■■■■ 4.86
Smarcc2-205ENSMUST00000218228 Urb2E9Q7L1 1524 aaKnown RBP45.37■■■■■ 4.85
Smarcc2-205ENSMUST00000218228 Col17a1Q07563 1470 aa45.32■■■■■ 4.85
Smarcc2-205ENSMUST00000218228 Plb1Q3TTY0 1478 aa45.25■■■■■ 4.83
Smarcc2-205ENSMUST00000218228 Dhx29Q6PGC1 1365 aaKnown RBP45.21■■■■■ 4.83
Smarcc2-205ENSMUST00000218228 Pabpn1Q8CCS6 302 aaKnown RBP45.11■■■■■ 4.81
Smarcc2-205ENSMUST00000218228 Ccdc18Q640L5 1455 aa45■■■■■ 4.79
Smarcc2-205ENSMUST00000218228 LrpprcQ6PB66 1392 aaKnown RBP45■■■■■ 4.79
Smarcc2-205ENSMUST00000218228 Top2bQ64511 1612 aa45■■■■■ 4.79
Smarcc2-205ENSMUST00000218228 Il27Q8K3I6 234 aa44.98■■■■■ 4.79
Smarcc2-205ENSMUST00000218228 TnnQ80Z71 1560 aa44.97■■■■■ 4.79
Smarcc2-205ENSMUST00000218228 Crocc2F6XLV1 1638 aa44.93■■■■■ 4.78
Smarcc2-205ENSMUST00000218228 Camsap1A2AHC3 1581 aa44.81■■■■■ 4.76
Smarcc2-205ENSMUST00000218228 Rusc2Q80U22 1514 aa44.77■■■■■ 4.76
Smarcc2-205ENSMUST00000218228 Ift140E9PY46 1464 aa44.75■■■■■ 4.75
Smarcc2-205ENSMUST00000218228 Pelp1Q9DBD5 1123 aaKnown RBP44.66■■■■■ 4.74
Smarcc2-205ENSMUST00000218228 PogzQ8BZH4 1409 aaKnown RBP44.66■■■■■ 4.74
Smarcc2-205ENSMUST00000218228 Zcchc11B2RX14 1644 aaKnown RBP44.57■■■■■ 4.73
Smarcc2-205ENSMUST00000218228 Golga3P55937 1487 aa44.57■■■■■ 4.73
Smarcc2-205ENSMUST00000218228 Duox2A2AQ99 1517 aa44.43■■■■■ 4.7
Smarcc2-205ENSMUST00000218228 Disp1Q3TDN0 1521 aa44.39■■■■■ 4.7
Smarcc2-205ENSMUST00000218228 Cngb1E1AZ71 1325 aa44.33■■■■■ 4.69
Smarcc2-205ENSMUST00000218228 Setd1bQ8CFT2 1985 aa44.25■■■■■ 4.67
Smarcc2-205ENSMUST00000218228 Fmn1Q05860 1466 aa44.23■■■■■ 4.67
Smarcc2-205ENSMUST00000218228 Nup160Q9Z0W3 1402 aaKnown RBP44.19■■■■■ 4.66
Smarcc2-205ENSMUST00000218228 Cc2d2bA0A286YDU8 1405 aa44.14■■■■■ 4.66
Smarcc2-205ENSMUST00000218228 Grin2bQ01097 1482 aa44.14■■■■■ 4.66
Smarcc2-205ENSMUST00000218228 Samd9lQ69Z37 1561 aa44.06■■■■■ 4.64
Smarcc2-205ENSMUST00000218228 Pbrm1Q8BSQ9 1634 aaKnown RBP44.05■■■■■ 4.64
Smarcc2-205ENSMUST00000218228 Pcdh10E9PXQ7 1057 aa44.04■■■■■ 4.64
Smarcc2-205ENSMUST00000218228 Adgrl3Q80TS3 1537 aa43.99■■■■■ 4.63
Smarcc2-205ENSMUST00000218228 Efcab5A0JP43 1406 aa43.92■■■■■ 4.62
Smarcc2-205ENSMUST00000218228 Arhgef5E9Q7D5 1581 aa43.89■■■■■ 4.62
Smarcc2-205ENSMUST00000218228 PtprkP35822 1457 aa43.86■■■■■ 4.61
Smarcc2-205ENSMUST00000218228 Fgd6Q69ZL1 1399 aa43.81■■■■■ 4.6
Smarcc2-205ENSMUST00000218228 Gm156Q58A37 223 aa43.8■■■■■ 4.6
Smarcc2-205ENSMUST00000218228 Rad54l2Q99NG0 1466 aa43.8■■■■■ 4.6
Smarcc2-205ENSMUST00000218228 Cep170Q6A065 1588 aa43.79■■■■■ 4.6
Smarcc2-205ENSMUST00000218228 AqrQ8CFQ3 1481 aaKnown RBP43.76■■■■■ 4.6
Smarcc2-205ENSMUST00000218228 Gapvd1Q6PAR5 1458 aa43.76■■■■■ 4.6
Smarcc2-205ENSMUST00000218228 Grin2aP35436 1464 aa43.74■■■■■ 4.59
Smarcc2-205ENSMUST00000218228 Magi3Q9EQJ9 1476 aa43.72■■■■■ 4.59
Smarcc2-205ENSMUST00000218228 PtprtQ99M80 1454 aa43.66■■■■■ 4.58
Smarcc2-205ENSMUST00000218228 Ttbk1Q6PCN3 1308 aa43.66■■■■■ 4.58
Smarcc2-205ENSMUST00000218228 Abcc1O35379 1528 aa43.45■■■■■ 4.55
Smarcc2-205ENSMUST00000218228 NrkQ9R0G8 1455 aa43.43■■■■■ 4.54
Smarcc2-205ENSMUST00000218228 AknaQ80VW7 1404 aa43.42■■■■■ 4.54
Smarcc2-205ENSMUST00000218228 Ythdc2B2RR83 1445 aaKnown RBP43.38■■■■■ 4.53
Retrieved 100 of 22,080 RNA–protein pairs in 14.7 ms