RNA–Protein interactions for RNA: ENSMUST00000217270.1

Ccdc84-211, Transcript of Coiled-coil domain-containing protein 84, mousemouse

TSL 1 (best) BASIC

Gene Ccdc84, Length 681 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc84-211ENSMUST00000217270 Gm35339A0A140LHH9 1649 aa44.57■■■■■ 4.72
Ccdc84-211ENSMUST00000217270 NischQ80TM9 1593 aa43.69■■■■■ 4.58
Ccdc84-211ENSMUST00000217270 Abcc8B2RUS7 1588 aa42.35■■■■■ 4.37
Ccdc84-211ENSMUST00000217270 Abcc9P70170 1546 aa42.29■■■■■ 4.36
Ccdc84-211ENSMUST00000217270 ScribQ80U72 1612 aa41.16■■■■■ 4.18
Ccdc84-211ENSMUST00000217270 NacadQ5SWP3 1504 aa39.67■■■■□ 3.94
Ccdc84-211ENSMUST00000217270 Kdm5dQ62240 1548 aa39.64■■■■□ 3.94
Ccdc84-211ENSMUST00000217270 Sycp2Q9CUU3 1500 aa38.94■■■■□ 3.82
Ccdc84-211ENSMUST00000217270 Dcaf1Q80TR8 1506 aa38.91■■■■□ 3.82
Ccdc84-211ENSMUST00000217270 BicraF8VPZ9 1578 aa38.53■■■■□ 3.76
Ccdc84-211ENSMUST00000217270 Rb1cc1Q9ESK9 1588 aa38.09■■■■□ 3.69
Ccdc84-211ENSMUST00000217270 Dnajc5bQ9CQ94 199 aa37.86■■■■□ 3.65
Ccdc84-211ENSMUST00000217270 Ccdc180J3QNE4 1664 aa37.53■■■■□ 3.6
Ccdc84-211ENSMUST00000217270 Baz1aO88379 1555 aa37.51■■■■□ 3.59
Ccdc84-211ENSMUST00000217270 Pds5bQ4VA53 1446 aaKnown RBP37.39■■■■□ 3.58
Ccdc84-211ENSMUST00000217270 Thoc2B1AZI6 1594 aaKnown RBP37.36■■■■□ 3.57
Ccdc84-211ENSMUST00000217270 Crybg2B7ZCC2 1516 aa37.36■■■■□ 3.57
Ccdc84-211ENSMUST00000217270 Rhox8Q6VSS7 320 aa37.2■■■■□ 3.55
Ccdc84-211ENSMUST00000217270 Atad2bE9Q166 1460 aaKnown RBP36.99■■■■□ 3.51
Ccdc84-211ENSMUST00000217270 Zcchc6Q5BLK4 1491 aaKnown RBP36.94■■■■□ 3.5
Ccdc84-211ENSMUST00000217270 Cc2d2aQ8CFW7 1633 aa36.71■■■■□ 3.47
Ccdc84-211ENSMUST00000217270 Smarca4Q3TKT4 1613 aaKnown RBP36.61■■■■□ 3.45
Ccdc84-211ENSMUST00000217270 Ercc6F8VPZ5 1481 aa36.61■■■■□ 3.45
Ccdc84-211ENSMUST00000217270 Smarca2Q6DIC0 1577 aa36.59■■■■□ 3.45
Ccdc84-211ENSMUST00000217270 Iqgap2Q3UQ44 1575 aa36.47■■■■□ 3.43
Ccdc84-211ENSMUST00000217270 Fam135aQ6NS59 1506 aa36.4■■■■□ 3.42
Ccdc84-211ENSMUST00000217270 Cecr2E9Q2Z1 1453 aa36.38■■■■□ 3.41
Ccdc84-211ENSMUST00000217270 Wdr62Q3U3T8 1523 aa36.23■■■■□ 3.39
Ccdc84-211ENSMUST00000217270 Frmpd1A2AKB4 1549 aa36.13■■■■□ 3.38
Ccdc84-211ENSMUST00000217270 Phldb1Q6PDH0 1371 aaKnown RBP35.93■■■■□ 3.34
Ccdc84-211ENSMUST00000217270 Baz1bQ9Z277 1479 aa35.9■■■■□ 3.34
Ccdc84-211ENSMUST00000217270 Unc13aQ4KUS2 1712 aa35.82■■■■□ 3.32
Ccdc84-211ENSMUST00000217270 Rtl1Q7M732 1744 aa35.62■■■■□ 3.29
Ccdc84-211ENSMUST00000217270 Ubl4bQ9CQ84 188 aa35.55■■■■□ 3.28
Ccdc84-211ENSMUST00000217270 Cttnbp2B9EJA2 1648 aa35.52■■■■□ 3.28
Ccdc84-211ENSMUST00000217270 Mrc2Q64449 1479 aa35.48■■■■□ 3.27
Ccdc84-211ENSMUST00000217270 CftrP26361 1476 aa35.47■■■■□ 3.27
Ccdc84-211ENSMUST00000217270 Synj1Q8CHC4 1574 aa35.42■■■■□ 3.26
Ccdc84-211ENSMUST00000217270 Brd4Q9ESU6 1400 aaKnown RBP35.21■■■■□ 3.23
Ccdc84-211ENSMUST00000217270 Ccdc136Q3TVA9 1136 aa34.9■■■■□ 3.18
Ccdc84-211ENSMUST00000217270 Lrriq1Q0P5X1 1673 aa34.85■■■■□ 3.17
Ccdc84-211ENSMUST00000217270 Cux2P70298 1426 aa34.72■■■■□ 3.15
Ccdc84-211ENSMUST00000217270 Kif21aQ9QXL2 1672 aa34.69■■■■□ 3.14
Ccdc84-211ENSMUST00000217270 Rsf1E9PWW9 1441 aaKnown RBP34.68■■■■□ 3.14
Ccdc84-211ENSMUST00000217270 Esf1Q3V1V3 845 aaKnown RBP34.65■■■■□ 3.14
Ccdc84-211ENSMUST00000217270 Kif15Q6P9L6 1387 aa34.64■■■■□ 3.14
Ccdc84-211ENSMUST00000217270 Dnajc5P60904 198 aa34.57■■■■□ 3.12
Ccdc84-211ENSMUST00000217270 Trim41Q5NCC3 630 aa34.57■■■■□ 3.12
Ccdc84-211ENSMUST00000217270 Lamc3Q9R0B6 1581 aa34.57■■■■□ 3.12
Ccdc84-211ENSMUST00000217270 Eif4g3Q80XI3 1579 aaKnown RBP34.32■■■■□ 3.09
Ccdc84-211ENSMUST00000217270 Npm1Q61937 292 aaKnown RBP34.23■■■■□ 3.07
Ccdc84-211ENSMUST00000217270 Cep164Q5DU05 1446 aa34.17■■■■□ 3.06
Ccdc84-211ENSMUST00000217270 TnnQ80Z71 1560 aa34.12■■■■□ 3.05
Ccdc84-211ENSMUST00000217270 Urb2E9Q7L1 1524 aaKnown RBP34.05■■■■□ 3.04
Ccdc84-211ENSMUST00000217270 Shroom2A2ALU4 1481 aa34.03■■■■□ 3.04
Ccdc84-211ENSMUST00000217270 Top2bQ64511 1612 aa34.03■■■■□ 3.04
Ccdc84-211ENSMUST00000217270 Dhx29Q6PGC1 1365 aaKnown RBP33.97■■■■□ 3.03
Ccdc84-211ENSMUST00000217270 Plb1Q3TTY0 1478 aa33.95■■■■□ 3.02
Ccdc84-211ENSMUST00000217270 Ccdc18Q640L5 1455 aa33.95■■■■□ 3.02
Ccdc84-211ENSMUST00000217270 Camsap1A2AHC3 1581 aa33.92■■■■□ 3.02
Ccdc84-211ENSMUST00000217270 Crocc2F6XLV1 1638 aa33.9■■■■□ 3.02
Ccdc84-211ENSMUST00000217270 Golga3P55937 1487 aa33.88■■■■□ 3.01
Ccdc84-211ENSMUST00000217270 LrpprcQ6PB66 1392 aaKnown RBP33.84■■■■□ 3.01
Ccdc84-211ENSMUST00000217270 Il27Q8K3I6 234 aa33.81■■■■□ 3
Ccdc84-211ENSMUST00000217270 Rusc2Q80U22 1514 aa33.65■■■□□ 2.98
Ccdc84-211ENSMUST00000217270 PogzQ8BZH4 1409 aaKnown RBP33.64■■■□□ 2.98
Ccdc84-211ENSMUST00000217270 Cngb1E1AZ71 1325 aa33.63■■■□□ 2.97
Ccdc84-211ENSMUST00000217270 Ift140E9PY46 1464 aa33.63■■■□□ 2.97
Ccdc84-211ENSMUST00000217270 Col17a1Q07563 1470 aa33.62■■■□□ 2.97
Ccdc84-211ENSMUST00000217270 Fmn1Q05860 1466 aa33.59■■■□□ 2.97
Ccdc84-211ENSMUST00000217270 Pabpn1Q8CCS6 302 aaKnown RBP33.49■■■□□ 2.95
Ccdc84-211ENSMUST00000217270 Duox2A2AQ99 1517 aa33.48■■■□□ 2.95
Ccdc84-211ENSMUST00000217270 Setd1bQ8CFT2 1985 aa33.41■■■□□ 2.94
Ccdc84-211ENSMUST00000217270 Grin2bQ01097 1482 aa33.37■■■□□ 2.93
Ccdc84-211ENSMUST00000217270 Disp1Q3TDN0 1521 aa33.35■■■□□ 2.93
Ccdc84-211ENSMUST00000217270 Samd9lQ69Z37 1561 aa33.31■■■□□ 2.92
Ccdc84-211ENSMUST00000217270 Pbrm1Q8BSQ9 1634 aaKnown RBP33.31■■■□□ 2.92
Ccdc84-211ENSMUST00000217270 Zcchc11B2RX14 1644 aaKnown RBP33.24■■■□□ 2.91
Ccdc84-211ENSMUST00000217270 Pelp1Q9DBD5 1123 aaKnown RBP33.24■■■□□ 2.91
Ccdc84-211ENSMUST00000217270 Nup160Q9Z0W3 1402 aaKnown RBP33.22■■■□□ 2.91
Ccdc84-211ENSMUST00000217270 Cc2d2bA0A286YDU8 1405 aa33.14■■■□□ 2.9
Ccdc84-211ENSMUST00000217270 Efcab5A0JP43 1406 aa33.11■■■□□ 2.89
Ccdc84-211ENSMUST00000217270 Rad54l2Q99NG0 1466 aa33■■■□□ 2.87
Ccdc84-211ENSMUST00000217270 Magi3Q9EQJ9 1476 aa32.98■■■□□ 2.87
Ccdc84-211ENSMUST00000217270 Grin2aP35436 1464 aa32.97■■■□□ 2.87
Ccdc84-211ENSMUST00000217270 AqrQ8CFQ3 1481 aaKnown RBP32.94■■■□□ 2.86
Ccdc84-211ENSMUST00000217270 Top2aQ01320 1528 aaKnown RBP32.92■■■□□ 2.86
Ccdc84-211ENSMUST00000217270 Ccdc88bQ4QRL3 1481 aa32.92■■■□□ 2.86
Ccdc84-211ENSMUST00000217270 NrkQ9R0G8 1455 aa32.89■■■□□ 2.86
Ccdc84-211ENSMUST00000217270 Gpatch8A2A6A1 1505 aa32.84■■■□□ 2.85
Ccdc84-211ENSMUST00000217270 Fgd6Q69ZL1 1399 aa32.83■■■□□ 2.85
Ccdc84-211ENSMUST00000217270 Adgrl3Q80TS3 1537 aa32.81■■■□□ 2.84
Ccdc84-211ENSMUST00000217270 Cep170Q6A065 1588 aa32.8■■■□□ 2.84
Ccdc84-211ENSMUST00000217270 PtprkP35822 1457 aa32.74■■■□□ 2.83
Ccdc84-211ENSMUST00000217270 Pla2r1Q62028 1487 aa32.74■■■□□ 2.83
Ccdc84-211ENSMUST00000217270 Shroom4Q1W617 1475 aa32.74■■■□□ 2.83
Ccdc84-211ENSMUST00000217270 Gapvd1Q6PAR5 1458 aa32.73■■■□□ 2.83
Ccdc84-211ENSMUST00000217270 SynmQ70IV5 1561 aa32.72■■■□□ 2.83
Ccdc84-211ENSMUST00000217270 Arhgef5E9Q7D5 1581 aa32.71■■■□□ 2.83
Ccdc84-211ENSMUST00000217270 Abcc1O35379 1528 aa32.62■■■□□ 2.81
Retrieved 100 of 22,080 RNA–protein pairs in 21.1 ms