RNA–Protein interactions for RNA: ENSMUST00000217017.1

Vegfa-213, Transcript of Vascular endothelial growth factor A, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Vegfa, Length 1,179 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vegfa-213ENSMUST00000217017 Gm35339A0A140LHH9 1649 aa52.37■■■■■ 5.97
Vegfa-213ENSMUST00000217017 NischQ80TM9 1593 aa51.41■■■■■ 5.82
Vegfa-213ENSMUST00000217017 Abcc9P70170 1546 aa50.31■■■■■ 5.64
Vegfa-213ENSMUST00000217017 Abcc8B2RUS7 1588 aa50.06■■■■■ 5.6
Vegfa-213ENSMUST00000217017 ScribQ80U72 1612 aa48.86■■■■■ 5.41
Vegfa-213ENSMUST00000217017 NacadQ5SWP3 1504 aa47.25■■■■■ 5.15
Vegfa-213ENSMUST00000217017 Kdm5dQ62240 1548 aa47.01■■■■■ 5.12
Vegfa-213ENSMUST00000217017 Dnajc5bQ9CQ94 199 aa46.69■■■■■ 5.06
Vegfa-213ENSMUST00000217017 Sycp2Q9CUU3 1500 aa46.38■■■■■ 5.02
Vegfa-213ENSMUST00000217017 BicraF8VPZ9 1578 aa45.92■■■■■ 4.94
Vegfa-213ENSMUST00000217017 Dcaf1Q80TR8 1506 aa45.7■■■■■ 4.91
Vegfa-213ENSMUST00000217017 Pds5bQ4VA53 1446 aaKnown RBP44.92■■■■■ 4.78
Vegfa-213ENSMUST00000217017 Thoc2B1AZI6 1594 aaKnown RBP44.82■■■■■ 4.77
Vegfa-213ENSMUST00000217017 Rb1cc1Q9ESK9 1588 aa44.65■■■■■ 4.74
Vegfa-213ENSMUST00000217017 Atad2bE9Q166 1460 aaKnown RBP44.26■■■■■ 4.68
Vegfa-213ENSMUST00000217017 Cc2d2aQ8CFW7 1633 aa44.13■■■■■ 4.65
Vegfa-213ENSMUST00000217017 Crybg2B7ZCC2 1516 aa44■■■■■ 4.63
Vegfa-213ENSMUST00000217017 Baz1aO88379 1555 aa43.93■■■■■ 4.62
Vegfa-213ENSMUST00000217017 Ercc6F8VPZ5 1481 aa43.84■■■■■ 4.61
Vegfa-213ENSMUST00000217017 Zcchc6Q5BLK4 1491 aaKnown RBP43.64■■■■■ 4.58
Vegfa-213ENSMUST00000217017 Fam135aQ6NS59 1506 aa43.59■■■■■ 4.57
Vegfa-213ENSMUST00000217017 Smarca2Q6DIC0 1577 aa43.58■■■■■ 4.57
Vegfa-213ENSMUST00000217017 Rhox8Q6VSS7 320 aa43.56■■■■■ 4.56
Vegfa-213ENSMUST00000217017 Ccdc180J3QNE4 1664 aa43.53■■■■■ 4.56
Vegfa-213ENSMUST00000217017 Smarca4Q3TKT4 1613 aaKnown RBP43.33■■■■■ 4.53
Vegfa-213ENSMUST00000217017 Dnajc5P60904 198 aa43.3■■■■■ 4.52
Vegfa-213ENSMUST00000217017 Iqgap2Q3UQ44 1575 aa43.29■■■■■ 4.52
Vegfa-213ENSMUST00000217017 Phldb1Q6PDH0 1371 aaKnown RBP43.23■■■■■ 4.51
Vegfa-213ENSMUST00000217017 Frmpd1A2AKB4 1549 aa43.14■■■■■ 4.5
Vegfa-213ENSMUST00000217017 Wdr62Q3U3T8 1523 aa43.1■■■■■ 4.49
Vegfa-213ENSMUST00000217017 Cecr2E9Q2Z1 1453 aa43.09■■■■■ 4.49
Vegfa-213ENSMUST00000217017 Ubl4bQ9CQ84 188 aa43.04■■■■■ 4.48
Vegfa-213ENSMUST00000217017 Baz1bQ9Z277 1479 aa42.99■■■■■ 4.47
Vegfa-213ENSMUST00000217017 Trim41Q5NCC3 630 aa42.77■■■■■ 4.44
Vegfa-213ENSMUST00000217017 Mrc2Q64449 1479 aa42.65■■■■■ 4.42
Vegfa-213ENSMUST00000217017 Unc13aQ4KUS2 1712 aa42.26■■■■■ 4.36
Vegfa-213ENSMUST00000217017 CftrP26361 1476 aa41.83■■■■■ 4.29
Vegfa-213ENSMUST00000217017 Lrriq1Q0P5X1 1673 aa41.71■■■■■ 4.27
Vegfa-213ENSMUST00000217017 Rsf1E9PWW9 1441 aaKnown RBP41.67■■■■■ 4.26
Vegfa-213ENSMUST00000217017 Cttnbp2B9EJA2 1648 aa41.6■■■■■ 4.25
Vegfa-213ENSMUST00000217017 Synj1Q8CHC4 1574 aa41.55■■■■■ 4.24
Vegfa-213ENSMUST00000217017 Cux2P70298 1426 aa41.52■■■■■ 4.24
Vegfa-213ENSMUST00000217017 Brd4Q9ESU6 1400 aaKnown RBP41.36■■■■■ 4.21
Vegfa-213ENSMUST00000217017 Shroom2A2ALU4 1481 aa41.34■■■■■ 4.21
Vegfa-213ENSMUST00000217017 Kif15Q6P9L6 1387 aa41.3■■■■■ 4.2
Vegfa-213ENSMUST00000217017 Kif21aQ9QXL2 1672 aa41.24■■■■■ 4.19
Vegfa-213ENSMUST00000217017 Esf1Q3V1V3 845 aaKnown RBP41.18■■■■■ 4.18
Vegfa-213ENSMUST00000217017 Npm1Q61937 292 aaKnown RBP41.11■■■■■ 4.17
Vegfa-213ENSMUST00000217017 Col17a1Q07563 1470 aa41.09■■■■■ 4.17
Vegfa-213ENSMUST00000217017 Ccdc136Q3TVA9 1136 aa41.07■■■■■ 4.17
Vegfa-213ENSMUST00000217017 Eif4g3Q80XI3 1579 aaKnown RBP41.07■■■■■ 4.16
Vegfa-213ENSMUST00000217017 Pabpn1Q8CCS6 302 aaKnown RBP40.93■■■■■ 4.14
Vegfa-213ENSMUST00000217017 Lamc3Q9R0B6 1581 aa40.76■■■■■ 4.12
Vegfa-213ENSMUST00000217017 Cep164Q5DU05 1446 aa40.73■■■■■ 4.11
Vegfa-213ENSMUST00000217017 Urb2E9Q7L1 1524 aaKnown RBP40.72■■■■■ 4.11
Vegfa-213ENSMUST00000217017 Plb1Q3TTY0 1478 aa40.64■■■■■ 4.1
Vegfa-213ENSMUST00000217017 Top2bQ64511 1612 aa40.6■■■■■ 4.09
Vegfa-213ENSMUST00000217017 Dhx29Q6PGC1 1365 aaKnown RBP40.57■■■■■ 4.08
Vegfa-213ENSMUST00000217017 Rtl1Q7M732 1744 aa40.56■■■■■ 4.08
Vegfa-213ENSMUST00000217017 Pelp1Q9DBD5 1123 aaKnown RBP40.54■■■■■ 4.08
Vegfa-213ENSMUST00000217017 Il27Q8K3I6 234 aa40.45■■■■■ 4.07
Vegfa-213ENSMUST00000217017 LrpprcQ6PB66 1392 aaKnown RBP40.31■■■■■ 4.04
Vegfa-213ENSMUST00000217017 Ccdc18Q640L5 1455 aa40.22■■■■■ 4.03
Vegfa-213ENSMUST00000217017 Zcchc11B2RX14 1644 aaKnown RBP40.19■■■■■ 4.02
Vegfa-213ENSMUST00000217017 Pcdh10E9PXQ7 1057 aa40.16■■■■■ 4.02
Vegfa-213ENSMUST00000217017 Crocc2F6XLV1 1638 aa40.16■■■■■ 4.02
Vegfa-213ENSMUST00000217017 Rusc2Q80U22 1514 aa40.13■■■■■ 4.01
Vegfa-213ENSMUST00000217017 Ift140E9PY46 1464 aa40.12■■■■■ 4.01
Vegfa-213ENSMUST00000217017 PogzQ8BZH4 1409 aaKnown RBP39.92■■■■□ 3.98
Vegfa-213ENSMUST00000217017 TnnQ80Z71 1560 aa39.89■■■■□ 3.98
Vegfa-213ENSMUST00000217017 Camsap1A2AHC3 1581 aa39.89■■■■□ 3.98
Vegfa-213ENSMUST00000217017 Disp1Q3TDN0 1521 aa39.76■■■■□ 3.96
Vegfa-213ENSMUST00000217017 Adgrl3Q80TS3 1537 aa39.73■■■■□ 3.95
Vegfa-213ENSMUST00000217017 Ttbk1Q6PCN3 1308 aa39.72■■■■□ 3.95
Vegfa-213ENSMUST00000217017 Duox2A2AQ99 1517 aa39.71■■■■□ 3.95
Vegfa-213ENSMUST00000217017 Arhgef5E9Q7D5 1581 aa39.69■■■■□ 3.94
Vegfa-213ENSMUST00000217017 Gm156Q58A37 223 aa39.63■■■■□ 3.93
Vegfa-213ENSMUST00000217017 PtprkP35822 1457 aa39.59■■■■□ 3.93
Vegfa-213ENSMUST00000217017 Cc2d2bA0A286YDU8 1405 aa39.57■■■■□ 3.93
Vegfa-213ENSMUST00000217017 Golga3P55937 1487 aa39.57■■■■□ 3.93
Vegfa-213ENSMUST00000217017 Nup160Q9Z0W3 1402 aaKnown RBP39.55■■■■□ 3.92
Vegfa-213ENSMUST00000217017 Cngb1E1AZ71 1325 aa39.53■■■■□ 3.92
Vegfa-213ENSMUST00000217017 PtprtQ99M80 1454 aa39.45■■■■□ 3.91
Vegfa-213ENSMUST00000217017 Gapvd1Q6PAR5 1458 aa39.42■■■■□ 3.9
Vegfa-213ENSMUST00000217017 Cep170Q6A065 1588 aa39.4■■■■□ 3.9
Vegfa-213ENSMUST00000217017 Fgd6Q69ZL1 1399 aa39.39■■■■□ 3.9
Vegfa-213ENSMUST00000217017 Setd1bQ8CFT2 1985 aa39.33■■■■□ 3.89
Vegfa-213ENSMUST00000217017 Grin2bQ01097 1482 aa39.32■■■■□ 3.89
Vegfa-213ENSMUST00000217017 Samd9lQ69Z37 1561 aa39.26■■■■□ 3.88
Vegfa-213ENSMUST00000217017 Pbrm1Q8BSQ9 1634 aaKnown RBP39.25■■■■□ 3.87
Vegfa-213ENSMUST00000217017 Fmn1Q05860 1466 aa39.24■■■■□ 3.87
Vegfa-213ENSMUST00000217017 Rad54l2Q99NG0 1466 aa39.2■■■■□ 3.87
Vegfa-213ENSMUST00000217017 Efcab5A0JP43 1406 aa39.2■■■■□ 3.87
Vegfa-213ENSMUST00000217017 AqrQ8CFQ3 1481 aaKnown RBP39.17■■■■□ 3.86
Vegfa-213ENSMUST00000217017 Grin2aP35436 1464 aa39.09■■■■□ 3.85
Vegfa-213ENSMUST00000217017 Ythdc2B2RR83 1445 aaKnown RBP39.07■■■■□ 3.85
Vegfa-213ENSMUST00000217017 AknaQ80VW7 1404 aa39.06■■■■□ 3.84
Vegfa-213ENSMUST00000217017 Magi3Q9EQJ9 1476 aa39.03■■■■□ 3.84
Vegfa-213ENSMUST00000217017 Abcc1O35379 1528 aa39■■■■□ 3.83
Vegfa-213ENSMUST00000217017 Pprc1Q6NZN1 1644 aa38.99■■■■□ 3.83
Retrieved 100 of 22,080 RNA–protein pairs in 16.7 ms