RNA–Protein interactions for RNA: ENSMUST00000212896.1

Smpd3-202, Transcript of Sphingomyelin phosphodiesterase 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Smpd3, Length 2,626 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smpd3-202ENSMUST00000212896 NischQ80TM9 1593 aa28.25■■■□□ 2.11
Smpd3-202ENSMUST00000212896 Gm35339A0A140LHH9 1649 aa27.8■■■□□ 2.04
Smpd3-202ENSMUST00000212896 Abcc9P70170 1546 aa27.45■■□□□ 1.98
Smpd3-202ENSMUST00000212896 Abcc8B2RUS7 1588 aa26.89■■□□□ 1.89
Smpd3-202ENSMUST00000212896 Rhox8Q6VSS7 320 aa26.05■■□□□ 1.76
Smpd3-202ENSMUST00000212896 Rtl1Q7M732 1744 aa25.56■■□□□ 1.68
Smpd3-202ENSMUST00000212896 Ccdc180J3QNE4 1664 aa25.12■■□□□ 1.61
Smpd3-202ENSMUST00000212896 ScribQ80U72 1612 aa25.08■■□□□ 1.61
Smpd3-202ENSMUST00000212896 Dcaf1Q80TR8 1506 aa25.06■■□□□ 1.6
Smpd3-202ENSMUST00000212896 Zcchc6Q5BLK4 1491 aaKnown RBP24.84■■□□□ 1.57
Smpd3-202ENSMUST00000212896 Rb1cc1Q9ESK9 1588 aa24.73■■□□□ 1.55
Smpd3-202ENSMUST00000212896 Kdm5dQ62240 1548 aa24.59■■□□□ 1.53
Smpd3-202ENSMUST00000212896 Baz1aO88379 1555 aa24.45■■□□□ 1.51
Smpd3-202ENSMUST00000212896 NacadQ5SWP3 1504 aa24.4■■□□□ 1.5
Smpd3-202ENSMUST00000212896 Ccdc136Q3TVA9 1136 aa24.21■■□□□ 1.47
Smpd3-202ENSMUST00000212896 HrcG5E8J6 738 aa24.05■■□□□ 1.44
Smpd3-202ENSMUST00000212896 Crybg2B7ZCC2 1516 aa24.05■■□□□ 1.44
Smpd3-202ENSMUST00000212896 Smarca2Q6DIC0 1577 aa23.91■■□□□ 1.42
Smpd3-202ENSMUST00000212896 Sycp2Q9CUU3 1500 aa23.89■■□□□ 1.41
Smpd3-202ENSMUST00000212896 Trim41Q5NCC3 630 aa23.7■■□□□ 1.38
Smpd3-202ENSMUST00000212896 Rpgrip1Q9EPQ2 1331 aa23.52■■□□□ 1.36
Smpd3-202ENSMUST00000212896 Cecr2E9Q2Z1 1453 aa23.39■■□□□ 1.33
Smpd3-202ENSMUST00000212896 BicraF8VPZ9 1578 aa23.38■■□□□ 1.33
Smpd3-202ENSMUST00000212896 Cep164Q5DU05 1446 aa23.34■■□□□ 1.33
Smpd3-202ENSMUST00000212896 Acin1Q9JIX8 1338 aaKnown RBP23.33■■□□□ 1.33
Smpd3-202ENSMUST00000212896 Brd4Q9ESU6 1400 aaKnown RBP23.32■■□□□ 1.32
Smpd3-202ENSMUST00000212896 Ehmt2Q9Z148 1263 aaKnown RBP23.31■■□□□ 1.32
Smpd3-202ENSMUST00000212896 Synj1Q8CHC4 1574 aa23.15■■□□□ 1.3
Smpd3-202ENSMUST00000212896 Rsf1E9PWW9 1441 aaKnown RBP23.13■■□□□ 1.29
Smpd3-202ENSMUST00000212896 Cngb1E1AZ71 1325 aa23.12■■□□□ 1.29
Smpd3-202ENSMUST00000212896 Chic1Q8CBW7 227 aa23.1■■□□□ 1.29
Smpd3-202ENSMUST00000212896 Golga3P55937 1487 aa23.08■■□□□ 1.29
Smpd3-202ENSMUST00000212896 CftrP26361 1476 aa23.04■■□□□ 1.28
Smpd3-202ENSMUST00000212896 Ccdc88bQ4QRL3 1481 aa22.99■■□□□ 1.27
Smpd3-202ENSMUST00000212896 Cttnbp2B9EJA2 1648 aa22.85■■□□□ 1.25
Smpd3-202ENSMUST00000212896 Gab3Q8BSM5 595 aa22.82■■□□□ 1.24
Smpd3-202ENSMUST00000212896 Smarca4Q3TKT4 1613 aaKnown RBP22.82■■□□□ 1.24
Smpd3-202ENSMUST00000212896 Top2bQ64511 1612 aa22.81■■□□□ 1.24
Smpd3-202ENSMUST00000212896 Esf1Q3V1V3 845 aaKnown RBP22.81■■□□□ 1.24
Smpd3-202ENSMUST00000212896 Cc2d2aQ8CFW7 1633 aa22.56■■□□□ 1.2
Smpd3-202ENSMUST00000212896 Iqgap2Q3UQ44 1575 aa22.51■■□□□ 1.19
Smpd3-202ENSMUST00000212896 Fmn1Q05860 1466 aa22.47■■□□□ 1.19
Smpd3-202ENSMUST00000212896 Atad2bE9Q166 1460 aaKnown RBP22.43■■□□□ 1.18
Smpd3-202ENSMUST00000212896 Top2aQ01320 1528 aaKnown RBP22.37■■□□□ 1.17
Smpd3-202ENSMUST00000212896 Rapgef2Q8CHG7 1496 aa22.37■■□□□ 1.17
Smpd3-202ENSMUST00000212896 Pds5bQ4VA53 1446 aaKnown RBP22.3■■□□□ 1.16
Smpd3-202ENSMUST00000212896 Pcgf6Q99NA9 353 aa22.28■■□□□ 1.16
Smpd3-202ENSMUST00000212896 Mier1Q5UAK0 511 aa22.19■■□□□ 1.14
Smpd3-202ENSMUST00000212896 Cep162Q6ZQ06 1403 aa22.18■■□□□ 1.14
Smpd3-202ENSMUST00000212896 TnnQ80Z71 1560 aa22.12■■□□□ 1.13
Smpd3-202ENSMUST00000212896 Frmpd1A2AKB4 1549 aa22.11■■□□□ 1.13
Smpd3-202ENSMUST00000212896 Wdr62Q3U3T8 1523 aa22.08■■□□□ 1.12
Smpd3-202ENSMUST00000212896 NefmP08553 848 aa22.04■■□□□ 1.12
Smpd3-202ENSMUST00000212896 Supt5hO55201 1082 aaKnown RBP22.01■■□□□ 1.11
Smpd3-202ENSMUST00000212896 Eif4g1Q6NZJ6 1600 aaKnown RBP22■■□□□ 1.11
Smpd3-202ENSMUST00000212896 Myt1lP97500 1187 aa22■■□□□ 1.11
Smpd3-202ENSMUST00000212896 Npm2Q80W85 207 aa21.97■■□□□ 1.11
Smpd3-202ENSMUST00000212896 Lamc3Q9R0B6 1581 aa21.94■■□□□ 1.1
Smpd3-202ENSMUST00000212896 UbtfP25976 765 aaKnown RBP21.92■■□□□ 1.1
Smpd3-202ENSMUST00000212896 Ercc6F8VPZ5 1481 aa21.87■■□□□ 1.09
Smpd3-202ENSMUST00000212896 PtprkP35822 1457 aa21.87■■□□□ 1.09
Smpd3-202ENSMUST00000212896 Kif15Q6P9L6 1387 aa21.85■■□□□ 1.09
Smpd3-202ENSMUST00000212896 Zeb1Q64318 1117 aa21.83■■□□□ 1.09
Smpd3-202ENSMUST00000212896 Arhgap35Q91YM2 1499 aa21.83■■□□□ 1.09
Smpd3-202ENSMUST00000212896 NrkQ9R0G8 1455 aa21.82■■□□□ 1.08
Smpd3-202ENSMUST00000212896 Clip1Q922J3 1391 aa21.82■■□□□ 1.08
Smpd3-202ENSMUST00000212896 Unc13aQ4KUS2 1712 aa21.81■■□□□ 1.08
Smpd3-202ENSMUST00000212896 Il27Q8K3I6 234 aa21.75■■□□□ 1.07
Smpd3-202ENSMUST00000212896 Camsap1A2AHC3 1581 aa21.74■■□□□ 1.07
Smpd3-202ENSMUST00000212896 Shroom4Q1W617 1475 aa21.71■■□□□ 1.07
Smpd3-202ENSMUST00000212896 Plekhg3Q4VAC9 1341 aa21.67■■□□□ 1.06
Smpd3-202ENSMUST00000212896 Grin2bQ01097 1482 aa21.62■■□□□ 1.05
Smpd3-202ENSMUST00000212896 Map3k1P53349 1493 aa21.61■■□□□ 1.05
Smpd3-202ENSMUST00000212896 Ccdc18Q640L5 1455 aa21.61■■□□□ 1.05
Smpd3-202ENSMUST00000212896 Arap1Q4LDD4 1452 aa21.6■■□□□ 1.05
Smpd3-202ENSMUST00000212896 Eea1Q8BL66 1411 aa21.6■■□□□ 1.05
Smpd3-202ENSMUST00000212896 Phldb1Q6PDH0 1371 aaKnown RBP21.6■■□□□ 1.05
Smpd3-202ENSMUST00000212896 Thoc2B1AZI6 1594 aaKnown RBP21.57■■□□□ 1.04
Smpd3-202ENSMUST00000212896 Sall2Q9QX96 1004 aa21.56■■□□□ 1.04
Smpd3-202ENSMUST00000212896 Ncapd3Q6ZQK0 1506 aa21.55■■□□□ 1.04
Smpd3-202ENSMUST00000212896 Setd5Q5XJV7 1441 aa21.51■■□□□ 1.03
Smpd3-202ENSMUST00000212896 Mroh2bQ7M6Y6 1581 aa21.51■■□□□ 1.03
Smpd3-202ENSMUST00000212896 Arhgef5E9Q7D5 1581 aa21.5■■□□□ 1.03
Smpd3-202ENSMUST00000212896 Cux2P70298 1426 aa21.49■■□□□ 1.03
Smpd3-202ENSMUST00000212896 Ap3b1Q9Z1T1 1105 aa21.45■■□□□ 1.02
Smpd3-202ENSMUST00000212896 Ubl4bQ9CQ84 188 aa21.44■■□□□ 1.02
Smpd3-202ENSMUST00000212896 Baz1bQ9Z277 1479 aa21.44■■□□□ 1.02
Smpd3-202ENSMUST00000212896 Las1lA2BE28 776 aaKnown RBP21.41■■□□□ 1.02
Smpd3-202ENSMUST00000212896 Aebp2Q9Z248 504 aaKnown RBP21.41■■□□□ 1.02
Smpd3-202ENSMUST00000212896 AqrQ8CFQ3 1481 aaKnown RBP21.39■■□□□ 1.01
Smpd3-202ENSMUST00000212896 Efcab5A0JP43 1406 aa21.37■■□□□ 1.01
Smpd3-202ENSMUST00000212896 Npm1Q61937 292 aaKnown RBP21.37■■□□□ 1.01
Smpd3-202ENSMUST00000212896 Ankrd26Q811D2 1581 aa21.37■■□□□ 1.01
Smpd3-202ENSMUST00000212896 Fam135aQ6NS59 1506 aa21.36■■□□□ 1.01
Smpd3-202ENSMUST00000212896 Tiam1Q60610 1591 aa21.35■■□□□ 1.01
Smpd3-202ENSMUST00000212896 LrpprcQ6PB66 1392 aaKnown RBP21.35■■□□□ 1.01
Smpd3-202ENSMUST00000212896 Erich3F6QRE9 1637 aa21.35■■□□□ 1.01
Smpd3-202ENSMUST00000212896 Naip1Q9QWK5 1403 aa21.33■■□□□ 1
Smpd3-202ENSMUST00000212896 PogzQ8BZH4 1409 aaKnown RBP21.32■■□□□ 1
Smpd3-202ENSMUST00000212896 Neurod1Q60867 357 aa21.31■■□□□ 1
Retrieved 100 of 22,080 RNA–protein pairs in 12.4 ms