RNA–Protein interactions for RNA: ENSMUST00000211168.1

Lsm1-203, Transcript of U6 snRNA-associated Sm-like protein LSm1, mousemouse

TSL 3 BASIC

Gene Lsm1, Length 343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1-203ENSMUST00000211168 Gm35339A0A140LHH9 1649 aa40.18■■■■■ 4.02
Lsm1-203ENSMUST00000211168 NischQ80TM9 1593 aa39.4■■■■□ 3.9
Lsm1-203ENSMUST00000211168 Abcc8B2RUS7 1588 aa38.27■■■■□ 3.72
Lsm1-203ENSMUST00000211168 Abcc9P70170 1546 aa38.15■■■■□ 3.7
Lsm1-203ENSMUST00000211168 ScribQ80U72 1612 aa37.31■■■■□ 3.56
Lsm1-203ENSMUST00000211168 NacadQ5SWP3 1504 aa36.01■■■■□ 3.36
Lsm1-203ENSMUST00000211168 Kdm5dQ62240 1548 aa35.92■■■■□ 3.34
Lsm1-203ENSMUST00000211168 Sycp2Q9CUU3 1500 aa35.34■■■■□ 3.25
Lsm1-203ENSMUST00000211168 Dcaf1Q80TR8 1506 aa35.05■■■■□ 3.2
Lsm1-203ENSMUST00000211168 Dnajc5bQ9CQ94 199 aa34.98■■■■□ 3.19
Lsm1-203ENSMUST00000211168 BicraF8VPZ9 1578 aa34.98■■■■□ 3.19
Lsm1-203ENSMUST00000211168 Rb1cc1Q9ESK9 1588 aa34.31■■■■□ 3.08
Lsm1-203ENSMUST00000211168 Pds5bQ4VA53 1446 aaKnown RBP34.11■■■■□ 3.05
Lsm1-203ENSMUST00000211168 Thoc2B1AZI6 1594 aaKnown RBP34.08■■■■□ 3.05
Lsm1-203ENSMUST00000211168 Baz1aO88379 1555 aa33.75■■■□□ 2.99
Lsm1-203ENSMUST00000211168 Crybg2B7ZCC2 1516 aa33.67■■■□□ 2.98
Lsm1-203ENSMUST00000211168 Atad2bE9Q166 1460 aaKnown RBP33.65■■■□□ 2.98
Lsm1-203ENSMUST00000211168 Ccdc180J3QNE4 1664 aa33.61■■■□□ 2.97
Lsm1-203ENSMUST00000211168 Cc2d2aQ8CFW7 1633 aa33.51■■■□□ 2.96
Lsm1-203ENSMUST00000211168 Rhox8Q6VSS7 320 aa33.48■■■□□ 2.95
Lsm1-203ENSMUST00000211168 Zcchc6Q5BLK4 1491 aaKnown RBP33.41■■■□□ 2.94
Lsm1-203ENSMUST00000211168 Ercc6F8VPZ5 1481 aa33.39■■■□□ 2.94
Lsm1-203ENSMUST00000211168 Smarca2Q6DIC0 1577 aa33.21■■■□□ 2.91
Lsm1-203ENSMUST00000211168 Fam135aQ6NS59 1506 aa33.17■■■□□ 2.9
Lsm1-203ENSMUST00000211168 Smarca4Q3TKT4 1613 aaKnown RBP33.14■■■□□ 2.9
Lsm1-203ENSMUST00000211168 Iqgap2Q3UQ44 1575 aa33.07■■■□□ 2.88
Lsm1-203ENSMUST00000211168 Cecr2E9Q2Z1 1453 aa32.9■■■□□ 2.86
Lsm1-203ENSMUST00000211168 Wdr62Q3U3T8 1523 aa32.87■■■□□ 2.85
Lsm1-203ENSMUST00000211168 Frmpd1A2AKB4 1549 aa32.83■■■□□ 2.85
Lsm1-203ENSMUST00000211168 Phldb1Q6PDH0 1371 aaKnown RBP32.79■■■□□ 2.84
Lsm1-203ENSMUST00000211168 Baz1bQ9Z277 1479 aa32.7■■■□□ 2.83
Lsm1-203ENSMUST00000211168 Ubl4bQ9CQ84 188 aa32.54■■■□□ 2.8
Lsm1-203ENSMUST00000211168 Mrc2Q64449 1479 aa32.4■■■□□ 2.78
Lsm1-203ENSMUST00000211168 Unc13aQ4KUS2 1712 aa32.4■■■□□ 2.78
Lsm1-203ENSMUST00000211168 Dnajc5P60904 198 aa32.25■■■□□ 2.75
Lsm1-203ENSMUST00000211168 Trim41Q5NCC3 630 aa32.08■■■□□ 2.73
Lsm1-203ENSMUST00000211168 CftrP26361 1476 aa32.01■■■□□ 2.71
Lsm1-203ENSMUST00000211168 Cttnbp2B9EJA2 1648 aa31.99■■■□□ 2.71
Lsm1-203ENSMUST00000211168 Synj1Q8CHC4 1574 aa31.89■■■□□ 2.7
Lsm1-203ENSMUST00000211168 Lrriq1Q0P5X1 1673 aa31.76■■■□□ 2.67
Lsm1-203ENSMUST00000211168 Brd4Q9ESU6 1400 aaKnown RBP31.73■■■□□ 2.67
Lsm1-203ENSMUST00000211168 Rtl1Q7M732 1744 aa31.65■■■□□ 2.66
Lsm1-203ENSMUST00000211168 Rsf1E9PWW9 1441 aaKnown RBP31.59■■■□□ 2.65
Lsm1-203ENSMUST00000211168 Cux2P70298 1426 aa31.58■■■□□ 2.65
Lsm1-203ENSMUST00000211168 Kif21aQ9QXL2 1672 aa31.51■■■□□ 2.63
Lsm1-203ENSMUST00000211168 Kif15Q6P9L6 1387 aa31.47■■■□□ 2.63
Lsm1-203ENSMUST00000211168 Ccdc136Q3TVA9 1136 aa31.45■■■□□ 2.63
Lsm1-203ENSMUST00000211168 Esf1Q3V1V3 845 aaKnown RBP31.43■■■□□ 2.62
Lsm1-203ENSMUST00000211168 Eif4g3Q80XI3 1579 aaKnown RBP31.28■■■□□ 2.6
Lsm1-203ENSMUST00000211168 Shroom2A2ALU4 1481 aa31.24■■■□□ 2.59
Lsm1-203ENSMUST00000211168 Lamc3Q9R0B6 1581 aa31.21■■■□□ 2.59
Lsm1-203ENSMUST00000211168 Npm1Q61937 292 aaKnown RBP31.2■■■□□ 2.59
Lsm1-203ENSMUST00000211168 Cep164Q5DU05 1446 aa31.05■■■□□ 2.56
Lsm1-203ENSMUST00000211168 Urb2E9Q7L1 1524 aaKnown RBP30.98■■■□□ 2.55
Lsm1-203ENSMUST00000211168 Col17a1Q07563 1470 aa30.95■■■□□ 2.54
Lsm1-203ENSMUST00000211168 Plb1Q3TTY0 1478 aa30.89■■■□□ 2.54
Lsm1-203ENSMUST00000211168 Dhx29Q6PGC1 1365 aaKnown RBP30.88■■■□□ 2.53
Lsm1-203ENSMUST00000211168 Pabpn1Q8CCS6 302 aaKnown RBP30.83■■■□□ 2.53
Lsm1-203ENSMUST00000211168 Top2bQ64511 1612 aa30.8■■■□□ 2.52
Lsm1-203ENSMUST00000211168 Il27Q8K3I6 234 aa30.78■■■□□ 2.52
Lsm1-203ENSMUST00000211168 Ccdc18Q640L5 1455 aa30.76■■■□□ 2.51
Lsm1-203ENSMUST00000211168 Crocc2F6XLV1 1638 aa30.73■■■□□ 2.51
Lsm1-203ENSMUST00000211168 LrpprcQ6PB66 1392 aaKnown RBP30.71■■■□□ 2.51
Lsm1-203ENSMUST00000211168 TnnQ80Z71 1560 aa30.67■■■□□ 2.5
Lsm1-203ENSMUST00000211168 Pelp1Q9DBD5 1123 aaKnown RBP30.61■■■□□ 2.49
Lsm1-203ENSMUST00000211168 Rusc2Q80U22 1514 aa30.61■■■□□ 2.49
Lsm1-203ENSMUST00000211168 Camsap1A2AHC3 1581 aa30.6■■■□□ 2.49
Lsm1-203ENSMUST00000211168 Ift140E9PY46 1464 aa30.57■■■□□ 2.48
Lsm1-203ENSMUST00000211168 PogzQ8BZH4 1409 aaKnown RBP30.47■■■□□ 2.47
Lsm1-203ENSMUST00000211168 Zcchc11B2RX14 1644 aaKnown RBP30.47■■■□□ 2.47
Lsm1-203ENSMUST00000211168 Golga3P55937 1487 aa30.4■■■□□ 2.46
Lsm1-203ENSMUST00000211168 Cngb1E1AZ71 1325 aa30.33■■■□□ 2.45
Lsm1-203ENSMUST00000211168 Duox2A2AQ99 1517 aa30.32■■■□□ 2.44
Lsm1-203ENSMUST00000211168 Disp1Q3TDN0 1521 aa30.27■■■□□ 2.44
Lsm1-203ENSMUST00000211168 Fmn1Q05860 1466 aa30.19■■■□□ 2.42
Lsm1-203ENSMUST00000211168 Setd1bQ8CFT2 1985 aa30.17■■■□□ 2.42
Lsm1-203ENSMUST00000211168 Nup160Q9Z0W3 1402 aaKnown RBP30.14■■■□□ 2.42
Lsm1-203ENSMUST00000211168 Cc2d2bA0A286YDU8 1405 aa30.13■■■□□ 2.41
Lsm1-203ENSMUST00000211168 Grin2bQ01097 1482 aa30.12■■■□□ 2.41
Lsm1-203ENSMUST00000211168 Pbrm1Q8BSQ9 1634 aaKnown RBP30.11■■■□□ 2.41
Lsm1-203ENSMUST00000211168 Samd9lQ69Z37 1561 aa30.1■■■□□ 2.41
Lsm1-203ENSMUST00000211168 Pcdh10E9PXQ7 1057 aa30.09■■■□□ 2.41
Lsm1-203ENSMUST00000211168 Adgrl3Q80TS3 1537 aa30.08■■■□□ 2.41
Lsm1-203ENSMUST00000211168 Arhgef5E9Q7D5 1581 aa30.03■■■□□ 2.4
Lsm1-203ENSMUST00000211168 PtprkP35822 1457 aa29.99■■■□□ 2.39
Lsm1-203ENSMUST00000211168 Ttbk1Q6PCN3 1308 aa29.96■■■□□ 2.39
Lsm1-203ENSMUST00000211168 Cep170Q6A065 1588 aa29.95■■■□□ 2.39
Lsm1-203ENSMUST00000211168 Efcab5A0JP43 1406 aa29.93■■■□□ 2.38
Lsm1-203ENSMUST00000211168 Fgd6Q69ZL1 1399 aa29.92■■■□□ 2.38
Lsm1-203ENSMUST00000211168 Gapvd1Q6PAR5 1458 aa29.91■■■□□ 2.38
Lsm1-203ENSMUST00000211168 Rad54l2Q99NG0 1466 aa29.91■■■□□ 2.38
Lsm1-203ENSMUST00000211168 AqrQ8CFQ3 1481 aaKnown RBP29.89■■■□□ 2.38
Lsm1-203ENSMUST00000211168 Gm156Q58A37 223 aa29.89■■■□□ 2.38
Lsm1-203ENSMUST00000211168 Grin2aP35436 1464 aa29.87■■■□□ 2.37
Lsm1-203ENSMUST00000211168 PtprtQ99M80 1454 aa29.83■■■□□ 2.37
Lsm1-203ENSMUST00000211168 Magi3Q9EQJ9 1476 aa29.83■■■□□ 2.37
Lsm1-203ENSMUST00000211168 AknaQ80VW7 1404 aa29.73■■■□□ 2.35
Lsm1-203ENSMUST00000211168 Abcc1O35379 1528 aa29.7■■■□□ 2.34
Lsm1-203ENSMUST00000211168 Ythdc2B2RR83 1445 aaKnown RBP29.62■■■□□ 2.33
Lsm1-203ENSMUST00000211168 Pla2r1Q62028 1487 aa29.6■■■□□ 2.33
Retrieved 100 of 22,080 RNA–protein pairs in 28.5 ms