RNA–Protein interactions for RNA: ENSMUST00000210594.1

Clcn4-206, Transcript of H(+)/Cl(-) exchange transporter 4, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Clcn4, Length 2,539 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4-206ENSMUST00000210594 NischQ80TM9 1593 aa36.9■■■■□ 3.5
Clcn4-206ENSMUST00000210594 Gm35339A0A140LHH9 1649 aa36.32■■■■□ 3.4
Clcn4-206ENSMUST00000210594 Abcc9P70170 1546 aa35.81■■■■□ 3.32
Clcn4-206ENSMUST00000210594 Abcc8B2RUS7 1588 aa35.06■■■■□ 3.2
Clcn4-206ENSMUST00000210594 Rhox8Q6VSS7 320 aa34.09■■■■□ 3.05
Clcn4-206ENSMUST00000210594 Rtl1Q7M732 1744 aa33.55■■■□□ 2.96
Clcn4-206ENSMUST00000210594 Ccdc180J3QNE4 1664 aa32.9■■■□□ 2.86
Clcn4-206ENSMUST00000210594 Dcaf1Q80TR8 1506 aa32.74■■■□□ 2.83
Clcn4-206ENSMUST00000210594 ScribQ80U72 1612 aa32.69■■■□□ 2.82
Clcn4-206ENSMUST00000210594 Rb1cc1Q9ESK9 1588 aa32.32■■■□□ 2.76
Clcn4-206ENSMUST00000210594 Zcchc6Q5BLK4 1491 aaKnown RBP32.29■■■□□ 2.76
Clcn4-206ENSMUST00000210594 Kdm5dQ62240 1548 aa32.09■■■□□ 2.73
Clcn4-206ENSMUST00000210594 Baz1aO88379 1555 aa31.95■■■□□ 2.71
Clcn4-206ENSMUST00000210594 NacadQ5SWP3 1504 aa31.9■■■□□ 2.7
Clcn4-206ENSMUST00000210594 Ccdc136Q3TVA9 1136 aa31.61■■■□□ 2.65
Clcn4-206ENSMUST00000210594 Crybg2B7ZCC2 1516 aa31.43■■■□□ 2.62
Clcn4-206ENSMUST00000210594 HrcG5E8J6 738 aa31.4■■■□□ 2.62
Clcn4-206ENSMUST00000210594 Smarca2Q6DIC0 1577 aa31.2■■■□□ 2.59
Clcn4-206ENSMUST00000210594 Sycp2Q9CUU3 1500 aa31.19■■■□□ 2.58
Clcn4-206ENSMUST00000210594 Trim41Q5NCC3 630 aa31.04■■■□□ 2.56
Clcn4-206ENSMUST00000210594 Rpgrip1Q9EPQ2 1331 aa30.81■■■□□ 2.52
Clcn4-206ENSMUST00000210594 Brd4Q9ESU6 1400 aaKnown RBP30.51■■■□□ 2.47
Clcn4-206ENSMUST00000210594 BicraF8VPZ9 1578 aa30.47■■■□□ 2.47
Clcn4-206ENSMUST00000210594 Cep164Q5DU05 1446 aa30.47■■■□□ 2.47
Clcn4-206ENSMUST00000210594 Cecr2E9Q2Z1 1453 aa30.45■■■□□ 2.46
Clcn4-206ENSMUST00000210594 Acin1Q9JIX8 1338 aaKnown RBP30.41■■■□□ 2.46
Clcn4-206ENSMUST00000210594 Ehmt2Q9Z148 1263 aaKnown RBP30.35■■■□□ 2.45
Clcn4-206ENSMUST00000210594 Cngb1E1AZ71 1325 aa30.26■■■□□ 2.43
Clcn4-206ENSMUST00000210594 Synj1Q8CHC4 1574 aa30.2■■■□□ 2.43
Clcn4-206ENSMUST00000210594 Golga3P55937 1487 aa30.13■■■□□ 2.41
Clcn4-206ENSMUST00000210594 Rsf1E9PWW9 1441 aaKnown RBP30.1■■■□□ 2.41
Clcn4-206ENSMUST00000210594 Chic1Q8CBW7 227 aa30.05■■■□□ 2.4
Clcn4-206ENSMUST00000210594 CftrP26361 1476 aa30.04■■■□□ 2.4
Clcn4-206ENSMUST00000210594 Esf1Q3V1V3 845 aaKnown RBP29.92■■■□□ 2.38
Clcn4-206ENSMUST00000210594 Ccdc88bQ4QRL3 1481 aa29.92■■■□□ 2.38
Clcn4-206ENSMUST00000210594 Cttnbp2B9EJA2 1648 aa29.9■■■□□ 2.38
Clcn4-206ENSMUST00000210594 Smarca4Q3TKT4 1613 aaKnown RBP29.83■■■□□ 2.37
Clcn4-206ENSMUST00000210594 Gab3Q8BSM5 595 aa29.81■■■□□ 2.36
Clcn4-206ENSMUST00000210594 Top2bQ64511 1612 aa29.78■■■□□ 2.36
Clcn4-206ENSMUST00000210594 Cc2d2aQ8CFW7 1633 aa29.48■■■□□ 2.31
Clcn4-206ENSMUST00000210594 Iqgap2Q3UQ44 1575 aa29.43■■■□□ 2.3
Clcn4-206ENSMUST00000210594 Fmn1Q05860 1466 aa29.36■■■□□ 2.29
Clcn4-206ENSMUST00000210594 Atad2bE9Q166 1460 aaKnown RBP29.32■■■□□ 2.28
Clcn4-206ENSMUST00000210594 Pds5bQ4VA53 1446 aaKnown RBP29.2■■■□□ 2.27
Clcn4-206ENSMUST00000210594 Top2aQ01320 1528 aaKnown RBP29.19■■■□□ 2.26
Clcn4-206ENSMUST00000210594 Rapgef2Q8CHG7 1496 aa29.16■■■□□ 2.26
Clcn4-206ENSMUST00000210594 Pcgf6Q99NA9 353 aa28.97■■■□□ 2.23
Clcn4-206ENSMUST00000210594 Cep162Q6ZQ06 1403 aa28.92■■■□□ 2.22
Clcn4-206ENSMUST00000210594 Mier1Q5UAK0 511 aa28.9■■■□□ 2.22
Clcn4-206ENSMUST00000210594 TnnQ80Z71 1560 aa28.87■■■□□ 2.21
Clcn4-206ENSMUST00000210594 Frmpd1A2AKB4 1549 aa28.86■■■□□ 2.21
Clcn4-206ENSMUST00000210594 NefmP08553 848 aa28.85■■■□□ 2.21
Clcn4-206ENSMUST00000210594 Wdr62Q3U3T8 1523 aa28.84■■■□□ 2.21
Clcn4-206ENSMUST00000210594 Npm2Q80W85 207 aa28.81■■■□□ 2.2
Clcn4-206ENSMUST00000210594 Myt1lP97500 1187 aa28.79■■■□□ 2.2
Clcn4-206ENSMUST00000210594 Ercc6F8VPZ5 1481 aa28.68■■■□□ 2.18
Clcn4-206ENSMUST00000210594 Lamc3Q9R0B6 1581 aa28.67■■■□□ 2.18
Clcn4-206ENSMUST00000210594 Eif4g1Q6NZJ6 1600 aaKnown RBP28.65■■■□□ 2.18
Clcn4-206ENSMUST00000210594 UbtfP25976 765 aaKnown RBP28.64■■■□□ 2.17
Clcn4-206ENSMUST00000210594 Supt5hO55201 1082 aaKnown RBP28.6■■■□□ 2.17
Clcn4-206ENSMUST00000210594 Kif15Q6P9L6 1387 aa28.56■■■□□ 2.16
Clcn4-206ENSMUST00000210594 Unc13aQ4KUS2 1712 aa28.53■■■□□ 2.16
Clcn4-206ENSMUST00000210594 Clip1Q922J3 1391 aa28.5■■■□□ 2.15
Clcn4-206ENSMUST00000210594 Zeb1Q64318 1117 aa28.49■■■□□ 2.15
Clcn4-206ENSMUST00000210594 Il27Q8K3I6 234 aa28.46■■■□□ 2.15
Clcn4-206ENSMUST00000210594 NrkQ9R0G8 1455 aa28.45■■■□□ 2.15
Clcn4-206ENSMUST00000210594 Arhgap35Q91YM2 1499 aa28.45■■■□□ 2.14
Clcn4-206ENSMUST00000210594 PtprkP35822 1457 aa28.45■■■□□ 2.14
Clcn4-206ENSMUST00000210594 Camsap1A2AHC3 1581 aa28.41■■■□□ 2.14
Clcn4-206ENSMUST00000210594 Shroom4Q1W617 1475 aa28.35■■■□□ 2.13
Clcn4-206ENSMUST00000210594 Ccdc18Q640L5 1455 aa28.32■■■□□ 2.12
Clcn4-206ENSMUST00000210594 Plekhg3Q4VAC9 1341 aa28.28■■■□□ 2.12
Clcn4-206ENSMUST00000210594 Phldb1Q6PDH0 1371 aaKnown RBP28.26■■■□□ 2.11
Clcn4-206ENSMUST00000210594 Eea1Q8BL66 1411 aa28.24■■■□□ 2.11
Clcn4-206ENSMUST00000210594 Map3k1P53349 1493 aa28.23■■■□□ 2.11
Clcn4-206ENSMUST00000210594 Grin2bQ01097 1482 aa28.23■■■□□ 2.11
Clcn4-206ENSMUST00000210594 Thoc2B1AZI6 1594 aaKnown RBP28.18■■■□□ 2.1
Clcn4-206ENSMUST00000210594 Arap1Q4LDD4 1452 aa28.13■■■□□ 2.09
Clcn4-206ENSMUST00000210594 Setd5Q5XJV7 1441 aa28.11■■■□□ 2.09
Clcn4-206ENSMUST00000210594 Las1lA2BE28 776 aaKnown RBP28.09■■■□□ 2.09
Clcn4-206ENSMUST00000210594 Mroh2bQ7M6Y6 1581 aa28.09■■■□□ 2.09
Clcn4-206ENSMUST00000210594 Ubl4bQ9CQ84 188 aa28.09■■■□□ 2.09
Clcn4-206ENSMUST00000210594 Cux2P70298 1426 aa28.08■■■□□ 2.09
Clcn4-206ENSMUST00000210594 Ncapd3Q6ZQK0 1506 aa28.07■■■□□ 2.08
Clcn4-206ENSMUST00000210594 Arhgef5E9Q7D5 1581 aa28.06■■■□□ 2.08
Clcn4-206ENSMUST00000210594 Npm1Q61937 292 aaKnown RBP28.03■■■□□ 2.08
Clcn4-206ENSMUST00000210594 Sall2Q9QX96 1004 aa28.02■■■□□ 2.08
Clcn4-206ENSMUST00000210594 Ap3b1Q9Z1T1 1105 aa28.01■■■□□ 2.08
Clcn4-206ENSMUST00000210594 Baz1bQ9Z277 1479 aa28.01■■■□□ 2.08
Clcn4-206ENSMUST00000210594 AqrQ8CFQ3 1481 aaKnown RBP27.94■■■□□ 2.06
Clcn4-206ENSMUST00000210594 Efcab5A0JP43 1406 aa27.93■■■□□ 2.06
Clcn4-206ENSMUST00000210594 Fam135aQ6NS59 1506 aa27.92■■■□□ 2.06
Clcn4-206ENSMUST00000210594 LrpprcQ6PB66 1392 aaKnown RBP27.9■■■□□ 2.06
Clcn4-206ENSMUST00000210594 Erich3F6QRE9 1637 aa27.9■■■□□ 2.06
Clcn4-206ENSMUST00000210594 Tiam1Q60610 1591 aa27.88■■■□□ 2.05
Clcn4-206ENSMUST00000210594 Ankrd26Q811D2 1581 aa27.87■■■□□ 2.05
Clcn4-206ENSMUST00000210594 TonslQ6NZL6 1363 aa27.86■■■□□ 2.05
Clcn4-206ENSMUST00000210594 PogzQ8BZH4 1409 aaKnown RBP27.84■■■□□ 2.05
Clcn4-206ENSMUST00000210594 Wdr66E9Q743 1299 aa27.82■■■□□ 2.04
Clcn4-206ENSMUST00000210594 Duox2A2AQ99 1517 aa27.81■■■□□ 2.04
Retrieved 100 of 22,080 RNA–protein pairs in 45.3 ms