RNA–Protein interactions for RNA: ENSMUST00000208231.1

Synm-204, Transcript of Synemin, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Synm, Length 4,457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Synm-204ENSMUST00000208231 Rpgrip1Q9EPQ2 1331 aa24.43■■□□□ 1.5
Synm-204ENSMUST00000208231 Rhox8Q6VSS7 320 aa24.4■■□□□ 1.5
Synm-204ENSMUST00000208231 Las1lA2BE28 776 aaKnown RBP23.67■■□□□ 1.38
Synm-204ENSMUST00000208231 Ehmt2Q9Z148 1263 aaKnown RBP23.19■■□□□ 1.3
Synm-204ENSMUST00000208231 Cngb1E1AZ71 1325 aa23.15■■□□□ 1.3
Synm-204ENSMUST00000208231 Acin1Q9JIX8 1338 aaKnown RBP22.57■■□□□ 1.2
Synm-204ENSMUST00000208231 CenpbP27790 599 aa22.55■■□□□ 1.2
Synm-204ENSMUST00000208231 Myt1Q8CFC2 1127 aa22.49■■□□□ 1.19
Synm-204ENSMUST00000208231 Zeb1Q64318 1117 aa22.44■■□□□ 1.18
Synm-204ENSMUST00000208231 Pelp1Q9DBD5 1123 aaKnown RBP22.41■■□□□ 1.18
Synm-204ENSMUST00000208231 Pcgf6Q99NA9 353 aa22.41■■□□□ 1.18
Synm-204ENSMUST00000208231 NischQ80TM9 1593 aa22.41■■□□□ 1.18
Synm-204ENSMUST00000208231 Wdr66E9Q743 1299 aa22.33■■□□□ 1.17
Synm-204ENSMUST00000208231 Amer1Q7TS75 1132 aa22.14■■□□□ 1.13
Synm-204ENSMUST00000208231 Ccdc136Q3TVA9 1136 aa22.12■■□□□ 1.13
Synm-204ENSMUST00000208231 DiexfQ8BTT6 772 aaKnown RBP22.08■■□□□ 1.12
Synm-204ENSMUST00000208231 Supt5hO55201 1082 aaKnown RBP21.69■■□□□ 1.06
Synm-204ENSMUST00000208231 NefmP08553 848 aa21.61■■□□□ 1.05
Synm-204ENSMUST00000208231 Cdk11bP24788 784 aaKnown RBP21.6■■□□□ 1.05
Synm-204ENSMUST00000208231 Esf1Q3V1V3 845 aaKnown RBP21.55■■□□□ 1.04
Synm-204ENSMUST00000208231 Ttbk1Q6PCN3 1308 aa21.51■■□□□ 1.03
Synm-204ENSMUST00000208231 Neurod1Q60867 357 aa21.43■■□□□ 1.02
Synm-204ENSMUST00000208231 Gab3Q8BSM5 595 aa21.42■■□□□ 1.02
Synm-204ENSMUST00000208231 Nop58Q6DFW4 536 aaKnown RBP21.34■■□□□ 1.01
Synm-204ENSMUST00000208231 Trim41Q5NCC3 630 aa21.31■■□□□ 1
Synm-204ENSMUST00000208231 Abcc9P70170 1546 aa21.27■■□□□ 1
Synm-204ENSMUST00000208231 Stra8P70278 393 aa21.17■□□□□ 0.98
Synm-204ENSMUST00000208231 Tnnt3Q9QZ47 272 aa21.14■□□□□ 0.98
Synm-204ENSMUST00000208231 Csrnp3P59055 597 aa21.1■□□□□ 0.97
Synm-204ENSMUST00000208231 Rtl5Q5DTT4 599 aa21.08■□□□□ 0.96
Synm-204ENSMUST00000208231 4933416C03RikQ3V063 378 aa21.07■□□□□ 0.96
Synm-204ENSMUST00000208231 Anks4bQ8K3X6 423 aa21■□□□□ 0.95
Synm-204ENSMUST00000208231 Aplp2Q06335 707 aa20.97■□□□□ 0.95
Synm-204ENSMUST00000208231 Ccdc180J3QNE4 1664 aa20.94■□□□□ 0.94
Synm-204ENSMUST00000208231 HrcG5E8J6 738 aa20.94■□□□□ 0.94
Synm-204ENSMUST00000208231 Ppargc1bQ8VHJ7 1014 aa20.94■□□□□ 0.94
Synm-204ENSMUST00000208231 Gm38655A0A286YDK6 273 aa20.92■□□□□ 0.94
Synm-204ENSMUST00000208231 Slc24a1Q91WD8 1130 aa20.91■□□□□ 0.94
Synm-204ENSMUST00000208231 1700123L14RikQ3V2K7 440 aa20.9■□□□□ 0.94
Synm-204ENSMUST00000208231 UbtfP25976 765 aaKnown RBP20.89■□□□□ 0.93
Synm-204ENSMUST00000208231 Gm35339A0A140LHH9 1649 aa20.86■□□□□ 0.93
Synm-204ENSMUST00000208231 Myt1lP97500 1187 aa20.84■□□□□ 0.93
Synm-204ENSMUST00000208231 4930567H17RikQ3V0K5 233 aa20.82■□□□□ 0.92
Synm-204ENSMUST00000208231 Bcl11aQ9QYE3 773 aa20.78■□□□□ 0.92
Synm-204ENSMUST00000208231 Ube2uB1AUC4 352 aa20.74■□□□□ 0.91
Synm-204ENSMUST00000208231 Npm2Q80W85 207 aa20.73■□□□□ 0.91
Synm-204ENSMUST00000208231 Anp32aO35381 247 aa20.72■□□□□ 0.91
Synm-204ENSMUST00000208231 Abcc8B2RUS7 1588 aa20.68■□□□□ 0.9
Synm-204ENSMUST00000208231 Sall2Q9QX96 1004 aa20.66■□□□□ 0.9
Synm-204ENSMUST00000208231 Il27Q8K3I6 234 aa20.52■□□□□ 0.88
Synm-204ENSMUST00000208231 Zcchc6Q5BLK4 1491 aaKnown RBP20.52■□□□□ 0.87
Synm-204ENSMUST00000208231 ClspnQ80YR7 1315 aa20.51■□□□□ 0.87
Synm-204ENSMUST00000208231 Mier1Q5UAK0 511 aa20.49■□□□□ 0.87
Synm-204ENSMUST00000208231 Eif5bQ05D44 1216 aaKnown RBP20.47■□□□□ 0.87
Synm-204ENSMUST00000208231 DaxxO35613 739 aa20.43■□□□□ 0.86
Synm-204ENSMUST00000208231 Rtl1Q7M732 1744 aa20.4■□□□□ 0.86
Synm-204ENSMUST00000208231 TonslQ6NZL6 1363 aa20.39■□□□□ 0.85
Synm-204ENSMUST00000208231 Fam71e1A1L3C1 212 aa20.35■□□□□ 0.85
Synm-204ENSMUST00000208231 NrdcQ8BHG1 1161 aa20.29■□□□□ 0.84
Synm-204ENSMUST00000208231 Mapk8ip2Q9ERE9 830 aa20.29■□□□□ 0.84
Synm-204ENSMUST00000208231 NclP09405 707 aaKnown RBP20.21■□□□□ 0.83
Synm-204ENSMUST00000208231 NeflP08551 543 aa20.2■□□□□ 0.82
Synm-204ENSMUST00000208231 Dcaf1Q80TR8 1506 aa20.16■□□□□ 0.82
Synm-204ENSMUST00000208231 Ccdc9Q8VC31 543 aaKnown RBP20.15■□□□□ 0.82
Synm-204ENSMUST00000208231 Ap3b1Q9Z1T1 1105 aa20.04■□□□□ 0.8
Synm-204ENSMUST00000208231 Calr4Q3TQS0 420 aa20.01■□□□□ 0.79
Synm-204ENSMUST00000208231 Ppp4r2Q0VGB7 417 aa19.98■□□□□ 0.79
Synm-204ENSMUST00000208231 Hsp90aa1P07901 733 aaKnown RBP19.96■□□□□ 0.79
Synm-204ENSMUST00000208231 PrkcshO08795 521 aa19.89■□□□□ 0.77
Synm-204ENSMUST00000208231 Chic1Q8CBW7 227 aa19.87■□□□□ 0.77
Synm-204ENSMUST00000208231 Npm1Q61937 292 aaKnown RBP19.87■□□□□ 0.77
Synm-204ENSMUST00000208231 Anp32bQ9EST5 272 aaKnown RBP19.86■□□□□ 0.77
Synm-204ENSMUST00000208231 Wdr43Q6ZQL4 677 aaKnown RBP19.85■□□□□ 0.77
Synm-204ENSMUST00000208231 Ythdc1E9Q5K9 736 aaKnown RBP19.84■□□□□ 0.77
Synm-204ENSMUST00000208231 Irx3P81067 507 aa19.8■□□□□ 0.76
Synm-204ENSMUST00000208231 Ccdc27Q3V036 639 aa19.79■□□□□ 0.76
Synm-204ENSMUST00000208231 Fam50aQ9WV03 339 aaKnown RBP19.79■□□□□ 0.76
Synm-204ENSMUST00000208231 SafbD3YXK2 937 aaKnown RBP19.76■□□□□ 0.75
Synm-204ENSMUST00000208231 Aebp2Q9Z248 504 aaKnown RBP19.74■□□□□ 0.75
Synm-204ENSMUST00000208231 Plekhg3Q4VAC9 1341 aa19.67■□□□□ 0.74
Synm-204ENSMUST00000208231 Rb1cc1Q9ESK9 1588 aa19.66■□□□□ 0.74
Synm-204ENSMUST00000208231 Hnrnpul2Q00PI9 745 aaKnown RBP19.65■□□□□ 0.74
Synm-204ENSMUST00000208231 Ubl4bQ9CQ84 188 aa19.6■□□□□ 0.73
Synm-204ENSMUST00000208231 Eid3Q3V124 375 aa19.59■□□□□ 0.73
Synm-204ENSMUST00000208231 Pknox2Q8BG99 474 aa19.58■□□□□ 0.73
Synm-204ENSMUST00000208231 Lmod2Q3UHZ5 550 aa19.53■□□□□ 0.72
Synm-204ENSMUST00000208231 ArxO35085 564 aa19.51■□□□□ 0.71
Synm-204ENSMUST00000208231 Upf2A2AT37 1269 aaKnown RBP19.49■□□□□ 0.71
Synm-204ENSMUST00000208231 Ifnlr1Q8CGK5 535 aa19.47■□□□□ 0.71
Synm-204ENSMUST00000208231 Lmod3E9QA62 571 aa19.45■□□□□ 0.7
Synm-204ENSMUST00000208231 Gtf3c3Q3TMP1 882 aa19.45■□□□□ 0.7
Synm-204ENSMUST00000208231 Hdac5Q9Z2V6 1113 aa19.44■□□□□ 0.7
Synm-204ENSMUST00000208231 Cep164Q5DU05 1446 aa19.43■□□□□ 0.7
Synm-204ENSMUST00000208231 NacadQ5SWP3 1504 aa19.42■□□□□ 0.7
Synm-204ENSMUST00000208231 Brd4Q9ESU6 1400 aaKnown RBP19.41■□□□□ 0.7
Synm-204ENSMUST00000208231 CanxP35564 591 aaKnown RBP19.39■□□□□ 0.69
Synm-204ENSMUST00000208231 Supt16hQ920B9 1047 aa19.33■□□□□ 0.68
Synm-204ENSMUST00000208231 Taok2Q6ZQ29 1240 aa19.33■□□□□ 0.68
Synm-204ENSMUST00000208231 Trim44Q9QXA7 346 aa19.31■□□□□ 0.68
Synm-204ENSMUST00000208231 AU015836B2RUM3 263 aa19.3■□□□□ 0.68
Retrieved 100 of 22,080 RNA–protein pairs in 40.8 ms