RNA–Protein interactions for RNA: ENSMUST00000208136.1

Lmo1-203, Transcript of Rhombotin-1, mousemouse

TSL 2 BASIC

Gene Lmo1, Length 772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo1-203ENSMUST00000208136 Gm35339A0A140LHH9 1649 aa36.39■■■■□ 3.42
Lmo1-203ENSMUST00000208136 NischQ80TM9 1593 aa35.94■■■■□ 3.34
Lmo1-203ENSMUST00000208136 Abcc9P70170 1546 aa34.79■■■■□ 3.16
Lmo1-203ENSMUST00000208136 Abcc8B2RUS7 1588 aa34.71■■■■□ 3.15
Lmo1-203ENSMUST00000208136 ScribQ80U72 1612 aa33.35■■■□□ 2.93
Lmo1-203ENSMUST00000208136 NacadQ5SWP3 1504 aa32.41■■■□□ 2.78
Lmo1-203ENSMUST00000208136 Kdm5dQ62240 1548 aa32.31■■■□□ 2.76
Lmo1-203ENSMUST00000208136 Dcaf1Q80TR8 1506 aa32.07■■■□□ 2.72
Lmo1-203ENSMUST00000208136 Sycp2Q9CUU3 1500 aa31.75■■■□□ 2.67
Lmo1-203ENSMUST00000208136 Rb1cc1Q9ESK9 1588 aa31.31■■■□□ 2.6
Lmo1-203ENSMUST00000208136 BicraF8VPZ9 1578 aa31.24■■■□□ 2.59
Lmo1-203ENSMUST00000208136 Rhox8Q6VSS7 320 aa31.14■■■□□ 2.58
Lmo1-203ENSMUST00000208136 Ccdc180J3QNE4 1664 aa31.01■■■□□ 2.55
Lmo1-203ENSMUST00000208136 Baz1aO88379 1555 aa30.92■■■□□ 2.54
Lmo1-203ENSMUST00000208136 Crybg2B7ZCC2 1516 aa30.89■■■□□ 2.54
Lmo1-203ENSMUST00000208136 Pds5bQ4VA53 1446 aaKnown RBP30.44■■■□□ 2.46
Lmo1-203ENSMUST00000208136 Zcchc6Q5BLK4 1491 aaKnown RBP30.39■■■□□ 2.46
Lmo1-203ENSMUST00000208136 Atad2bE9Q166 1460 aaKnown RBP30.15■■■□□ 2.42
Lmo1-203ENSMUST00000208136 Dnajc5bQ9CQ94 199 aa30.12■■■□□ 2.41
Lmo1-203ENSMUST00000208136 Thoc2B1AZI6 1594 aaKnown RBP30.06■■■□□ 2.4
Lmo1-203ENSMUST00000208136 Smarca2Q6DIC0 1577 aa30.02■■■□□ 2.4
Lmo1-203ENSMUST00000208136 Smarca4Q3TKT4 1613 aaKnown RBP29.92■■■□□ 2.38
Lmo1-203ENSMUST00000208136 Cecr2E9Q2Z1 1453 aa29.81■■■□□ 2.36
Lmo1-203ENSMUST00000208136 Ercc6F8VPZ5 1481 aa29.76■■■□□ 2.35
Lmo1-203ENSMUST00000208136 Iqgap2Q3UQ44 1575 aa29.72■■■□□ 2.35
Lmo1-203ENSMUST00000208136 Rtl1Q7M732 1744 aa29.65■■■□□ 2.34
Lmo1-203ENSMUST00000208136 Cc2d2aQ8CFW7 1633 aa29.57■■■□□ 2.32
Lmo1-203ENSMUST00000208136 Wdr62Q3U3T8 1523 aa29.45■■■□□ 2.31
Lmo1-203ENSMUST00000208136 Fam135aQ6NS59 1506 aa29.43■■■□□ 2.3
Lmo1-203ENSMUST00000208136 Frmpd1A2AKB4 1549 aa29.41■■■□□ 2.3
Lmo1-203ENSMUST00000208136 Phldb1Q6PDH0 1371 aaKnown RBP29.28■■■□□ 2.28
Lmo1-203ENSMUST00000208136 Baz1bQ9Z277 1479 aa29.24■■■□□ 2.27
Lmo1-203ENSMUST00000208136 Brd4Q9ESU6 1400 aaKnown RBP29.24■■■□□ 2.27
Lmo1-203ENSMUST00000208136 CftrP26361 1476 aa29.23■■■□□ 2.27
Lmo1-203ENSMUST00000208136 Cttnbp2B9EJA2 1648 aa29.19■■■□□ 2.26
Lmo1-203ENSMUST00000208136 Synj1Q8CHC4 1574 aa29.13■■■□□ 2.25
Lmo1-203ENSMUST00000208136 Ccdc136Q3TVA9 1136 aa29.1■■■□□ 2.25
Lmo1-203ENSMUST00000208136 Ubl4bQ9CQ84 188 aa28.98■■■□□ 2.23
Lmo1-203ENSMUST00000208136 Unc13aQ4KUS2 1712 aa28.97■■■□□ 2.23
Lmo1-203ENSMUST00000208136 Trim41Q5NCC3 630 aa28.81■■■□□ 2.2
Lmo1-203ENSMUST00000208136 Mrc2Q64449 1479 aa28.74■■■□□ 2.19
Lmo1-203ENSMUST00000208136 Esf1Q3V1V3 845 aaKnown RBP28.72■■■□□ 2.19
Lmo1-203ENSMUST00000208136 Rsf1E9PWW9 1441 aaKnown RBP28.52■■■□□ 2.16
Lmo1-203ENSMUST00000208136 Kif15Q6P9L6 1387 aa28.41■■■□□ 2.14
Lmo1-203ENSMUST00000208136 Cux2P70298 1426 aa28.37■■■□□ 2.13
Lmo1-203ENSMUST00000208136 Lamc3Q9R0B6 1581 aa28.37■■■□□ 2.13
Lmo1-203ENSMUST00000208136 Golga3P55937 1487 aa28.21■■■□□ 2.11
Lmo1-203ENSMUST00000208136 Top2bQ64511 1612 aa28.15■■■□□ 2.1
Lmo1-203ENSMUST00000208136 Npm1Q61937 292 aaKnown RBP28.12■■■□□ 2.09
Lmo1-203ENSMUST00000208136 Kif21aQ9QXL2 1672 aa28.07■■■□□ 2.08
Lmo1-203ENSMUST00000208136 Lrriq1Q0P5X1 1673 aa28.06■■■□□ 2.08
Lmo1-203ENSMUST00000208136 TnnQ80Z71 1560 aa28.05■■■□□ 2.08
Lmo1-203ENSMUST00000208136 Cep164Q5DU05 1446 aa28.04■■■□□ 2.08
Lmo1-203ENSMUST00000208136 Cngb1E1AZ71 1325 aa28.03■■■□□ 2.08
Lmo1-203ENSMUST00000208136 Ccdc18Q640L5 1455 aa27.97■■■□□ 2.07
Lmo1-203ENSMUST00000208136 Fmn1Q05860 1466 aa27.88■■■□□ 2.05
Lmo1-203ENSMUST00000208136 Camsap1A2AHC3 1581 aa27.83■■■□□ 2.05
Lmo1-203ENSMUST00000208136 LrpprcQ6PB66 1392 aaKnown RBP27.79■■■□□ 2.04
Lmo1-203ENSMUST00000208136 Dhx29Q6PGC1 1365 aaKnown RBP27.79■■■□□ 2.04
Lmo1-203ENSMUST00000208136 Il27Q8K3I6 234 aa27.79■■■□□ 2.04
Lmo1-203ENSMUST00000208136 Eif4g3Q80XI3 1579 aaKnown RBP27.7■■■□□ 2.03
Lmo1-203ENSMUST00000208136 Urb2E9Q7L1 1524 aaKnown RBP27.67■■■□□ 2.02
Lmo1-203ENSMUST00000208136 Plb1Q3TTY0 1478 aa27.64■■■□□ 2.02
Lmo1-203ENSMUST00000208136 Crocc2F6XLV1 1638 aa27.64■■■□□ 2.02
Lmo1-203ENSMUST00000208136 PogzQ8BZH4 1409 aaKnown RBP27.62■■■□□ 2.01
Lmo1-203ENSMUST00000208136 Duox2A2AQ99 1517 aa27.49■■□□□ 1.99
Lmo1-203ENSMUST00000208136 Grin2bQ01097 1482 aa27.48■■□□□ 1.99
Lmo1-203ENSMUST00000208136 Ift140E9PY46 1464 aa27.47■■□□□ 1.99
Lmo1-203ENSMUST00000208136 Ccdc88bQ4QRL3 1481 aa27.41■■□□□ 1.98
Lmo1-203ENSMUST00000208136 Efcab5A0JP43 1406 aa27.36■■□□□ 1.97
Lmo1-203ENSMUST00000208136 Top2aQ01320 1528 aaKnown RBP27.34■■□□□ 1.97
Lmo1-203ENSMUST00000208136 Shroom2A2ALU4 1481 aa27.32■■□□□ 1.96
Lmo1-203ENSMUST00000208136 Rusc2Q80U22 1514 aa27.29■■□□□ 1.96
Lmo1-203ENSMUST00000208136 NrkQ9R0G8 1455 aa27.26■■□□□ 1.95
Lmo1-203ENSMUST00000208136 Disp1Q3TDN0 1521 aa27.26■■□□□ 1.95
Lmo1-203ENSMUST00000208136 Dnajc5P60904 198 aa27.24■■□□□ 1.95
Lmo1-203ENSMUST00000208136 Chic1Q8CBW7 227 aa27.23■■□□□ 1.95
Lmo1-203ENSMUST00000208136 Samd9lQ69Z37 1561 aa27.22■■□□□ 1.95
Lmo1-203ENSMUST00000208136 Pbrm1Q8BSQ9 1634 aaKnown RBP27.19■■□□□ 1.94
Lmo1-203ENSMUST00000208136 Nup160Q9Z0W3 1402 aaKnown RBP27.16■■□□□ 1.94
Lmo1-203ENSMUST00000208136 Cc2d2bA0A286YDU8 1405 aa27.15■■□□□ 1.94
Lmo1-203ENSMUST00000208136 Shroom4Q1W617 1475 aa27.1■■□□□ 1.93
Lmo1-203ENSMUST00000208136 Pabpn1Q8CCS6 302 aaKnown RBP27.08■■□□□ 1.93
Lmo1-203ENSMUST00000208136 Setd1bQ8CFT2 1985 aa27.06■■□□□ 1.92
Lmo1-203ENSMUST00000208136 Rad54l2Q99NG0 1466 aa27.03■■□□□ 1.92
Lmo1-203ENSMUST00000208136 PtprkP35822 1457 aa27.02■■□□□ 1.92
Lmo1-203ENSMUST00000208136 Grin2aP35436 1464 aa27■■□□□ 1.91
Lmo1-203ENSMUST00000208136 Magi3Q9EQJ9 1476 aa26.98■■□□□ 1.91
Lmo1-203ENSMUST00000208136 HrcG5E8J6 738 aa26.93■■□□□ 1.9
Lmo1-203ENSMUST00000208136 AqrQ8CFQ3 1481 aaKnown RBP26.92■■□□□ 1.9
Lmo1-203ENSMUST00000208136 SynmQ70IV5 1561 aa26.92■■□□□ 1.9
Lmo1-203ENSMUST00000208136 Gpatch8A2A6A1 1505 aa26.9■■□□□ 1.9
Lmo1-203ENSMUST00000208136 Col17a1Q07563 1470 aa26.87■■□□□ 1.89
Lmo1-203ENSMUST00000208136 Pelp1Q9DBD5 1123 aaKnown RBP26.85■■□□□ 1.89
Lmo1-203ENSMUST00000208136 Pla2r1Q62028 1487 aa26.84■■□□□ 1.89
Lmo1-203ENSMUST00000208136 Fgd6Q69ZL1 1399 aa26.82■■□□□ 1.88
Lmo1-203ENSMUST00000208136 Zeb1Q64318 1117 aa26.81■■□□□ 1.88
Lmo1-203ENSMUST00000208136 Npm2Q80W85 207 aa26.76■■□□□ 1.87
Lmo1-203ENSMUST00000208136 Mroh2bQ7M6Y6 1581 aa26.75■■□□□ 1.87
Lmo1-203ENSMUST00000208136 Zcchc11B2RX14 1644 aaKnown RBP26.72■■□□□ 1.87
Retrieved 100 of 22,080 RNA–protein pairs in 50.2 ms