RNA–Protein interactions for RNA: ENSMUST00000206914.1

Rnf40-206, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,735 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-206ENSMUST00000206914 NischQ80TM9 1593 aa19.73■□□□□ 0.75
Rnf40-206ENSMUST00000206914 Gm35339A0A140LHH9 1649 aa19.23■□□□□ 0.67
Rnf40-206ENSMUST00000206914 Abcc9P70170 1546 aa19.2■□□□□ 0.66
Rnf40-206ENSMUST00000206914 Rtl1Q7M732 1744 aa18.95■□□□□ 0.62
Rnf40-206ENSMUST00000206914 Rhox8Q6VSS7 320 aa18.66■□□□□ 0.58
Rnf40-206ENSMUST00000206914 Ccdc180J3QNE4 1664 aa18.64■□□□□ 0.58
Rnf40-206ENSMUST00000206914 Abcc8B2RUS7 1588 aa18.62■□□□□ 0.57
Rnf40-206ENSMUST00000206914 Rpgrip1Q9EPQ2 1331 aa18.5■□□□□ 0.55
Rnf40-206ENSMUST00000206914 Zcchc6Q5BLK4 1491 aaKnown RBP17.99■□□□□ 0.47
Rnf40-206ENSMUST00000206914 Acin1Q9JIX8 1338 aaKnown RBP17.89■□□□□ 0.45
Rnf40-206ENSMUST00000206914 HrcG5E8J6 738 aa17.7■□□□□ 0.42
Rnf40-206ENSMUST00000206914 Dcaf1Q80TR8 1506 aa17.63■□□□□ 0.41
Rnf40-206ENSMUST00000206914 Ehmt2Q9Z148 1263 aaKnown RBP17.35■□□□□ 0.37
Rnf40-206ENSMUST00000206914 Pcgf6Q99NA9 353 aa17.32■□□□□ 0.36
Rnf40-206ENSMUST00000206914 Rb1cc1Q9ESK9 1588 aa17.32■□□□□ 0.36
Rnf40-206ENSMUST00000206914 Ccdc136Q3TVA9 1136 aa17.2■□□□□ 0.34
Rnf40-206ENSMUST00000206914 Baz1aO88379 1555 aa17.16■□□□□ 0.34
Rnf40-206ENSMUST00000206914 Trim41Q5NCC3 630 aa17.11■□□□□ 0.33
Rnf40-206ENSMUST00000206914 ScribQ80U72 1612 aa17.1■□□□□ 0.33
Rnf40-206ENSMUST00000206914 Cep164Q5DU05 1446 aa17.01■□□□□ 0.31
Rnf40-206ENSMUST00000206914 Kdm5dQ62240 1548 aa16.9■□□□□ 0.3
Rnf40-206ENSMUST00000206914 Supt5hO55201 1082 aaKnown RBP16.87■□□□□ 0.29
Rnf40-206ENSMUST00000206914 Crybg2B7ZCC2 1516 aa16.82■□□□□ 0.28
Rnf40-206ENSMUST00000206914 Smarca2Q6DIC0 1577 aa16.79■□□□□ 0.28
Rnf40-206ENSMUST00000206914 NacadQ5SWP3 1504 aa16.77■□□□□ 0.28
Rnf40-206ENSMUST00000206914 NefmP08553 848 aa16.69■□□□□ 0.26
Rnf40-206ENSMUST00000206914 Neurod1Q60867 357 aa16.62■□□□□ 0.25
Rnf40-206ENSMUST00000206914 Las1lA2BE28 776 aaKnown RBP16.59■□□□□ 0.25
Rnf40-206ENSMUST00000206914 Rsf1E9PWW9 1441 aaKnown RBP16.54■□□□□ 0.24
Rnf40-206ENSMUST00000206914 Zeb1Q64318 1117 aa16.5■□□□□ 0.23
Rnf40-206ENSMUST00000206914 Chic1Q8CBW7 227 aa16.48■□□□□ 0.23
Rnf40-206ENSMUST00000206914 Brd4Q9ESU6 1400 aaKnown RBP16.46■□□□□ 0.23
Rnf40-206ENSMUST00000206914 Cngb1E1AZ71 1325 aa16.46■□□□□ 0.23
Rnf40-206ENSMUST00000206914 Mier1Q5UAK0 511 aa16.46■□□□□ 0.23
Rnf40-206ENSMUST00000206914 Gab3Q8BSM5 595 aa16.43■□□□□ 0.22
Rnf40-206ENSMUST00000206914 Golga3P55937 1487 aa16.4■□□□□ 0.22
Rnf40-206ENSMUST00000206914 Sycp2Q9CUU3 1500 aa16.37■□□□□ 0.21
Rnf40-206ENSMUST00000206914 Sall2Q9QX96 1004 aa16.36■□□□□ 0.21
Rnf40-206ENSMUST00000206914 Ccdc88bQ4QRL3 1481 aa16.36■□□□□ 0.21
Rnf40-206ENSMUST00000206914 Anks4bQ8K3X6 423 aa16.33■□□□□ 0.2
Rnf40-206ENSMUST00000206914 Synj1Q8CHC4 1574 aa16.2■□□□□ 0.18
Rnf40-206ENSMUST00000206914 Cecr2E9Q2Z1 1453 aa16.19■□□□□ 0.18
Rnf40-206ENSMUST00000206914 Top2bQ64511 1612 aa16.14■□□□□ 0.17
Rnf40-206ENSMUST00000206914 1700123L14RikQ3V2K7 440 aa16.12■□□□□ 0.17
Rnf40-206ENSMUST00000206914 ClspnQ80YR7 1315 aa16.09■□□□□ 0.17
Rnf40-206ENSMUST00000206914 Wdr66E9Q743 1299 aa16.08■□□□□ 0.17
Rnf40-206ENSMUST00000206914 CftrP26361 1476 aa16.08■□□□□ 0.16
Rnf40-206ENSMUST00000206914 Cdk11bP24788 784 aaKnown RBP16.08■□□□□ 0.16
Rnf40-206ENSMUST00000206914 Csrnp3P59055 597 aa16.06■□□□□ 0.16
Rnf40-206ENSMUST00000206914 Esf1Q3V1V3 845 aaKnown RBP16.06■□□□□ 0.16
Rnf40-206ENSMUST00000206914 Myt1Q8CFC2 1127 aa16.06■□□□□ 0.16
Rnf40-206ENSMUST00000206914 Rapgef2Q8CHG7 1496 aa16.04■□□□□ 0.16
Rnf40-206ENSMUST00000206914 UbtfP25976 765 aaKnown RBP16.04■□□□□ 0.16
Rnf40-206ENSMUST00000206914 Aplp2Q06335 707 aa16.03■□□□□ 0.16
Rnf40-206ENSMUST00000206914 Nop58Q6DFW4 536 aaKnown RBP16.02■□□□□ 0.15
Rnf40-206ENSMUST00000206914 Aebp2Q9Z248 504 aaKnown RBP16.01■□□□□ 0.15
Rnf40-206ENSMUST00000206914 Cttnbp2B9EJA2 1648 aa16■□□□□ 0.15
Rnf40-206ENSMUST00000206914 CenpbP27790 599 aa15.92■□□□□ 0.14
Rnf40-206ENSMUST00000206914 Cc2d2aQ8CFW7 1633 aa15.91■□□□□ 0.14
Rnf40-206ENSMUST00000206914 TonslQ6NZL6 1363 aa15.91■□□□□ 0.14
Rnf40-206ENSMUST00000206914 Fmn1Q05860 1466 aa15.91■□□□□ 0.14
Rnf40-206ENSMUST00000206914 BicraF8VPZ9 1578 aa15.9■□□□□ 0.14
Rnf40-206ENSMUST00000206914 Cep162Q6ZQ06 1403 aa15.89■□□□□ 0.13
Rnf40-206ENSMUST00000206914 Top2aQ01320 1528 aaKnown RBP15.88■□□□□ 0.13
Rnf40-206ENSMUST00000206914 Smarca4Q3TKT4 1613 aaKnown RBP15.77■□□□□ 0.11
Rnf40-206ENSMUST00000206914 Myt1lP97500 1187 aa15.76■□□□□ 0.11
Rnf40-206ENSMUST00000206914 Ncapd3Q6ZQK0 1506 aa15.73■□□□□ 0.11
Rnf40-206ENSMUST00000206914 Clip1Q922J3 1391 aa15.73■□□□□ 0.11
Rnf40-206ENSMUST00000206914 Eif4g1Q6NZJ6 1600 aaKnown RBP15.69■□□□□ 0.1
Rnf40-206ENSMUST00000206914 Npm2Q80W85 207 aa15.68■□□□□ 0.1
Rnf40-206ENSMUST00000206914 Ppargc1bQ8VHJ7 1014 aa15.67■□□□□ 0.1
Rnf40-206ENSMUST00000206914 Tnnt3Q9QZ47 272 aa15.65■□□□□ 0.1
Rnf40-206ENSMUST00000206914 Plekhg3Q4VAC9 1341 aa15.62■□□□□ 0.09
Rnf40-206ENSMUST00000206914 Eea1Q8BL66 1411 aa15.51■□□□□ 0.07
Rnf40-206ENSMUST00000206914 Ccdc18Q640L5 1455 aa15.5■□□□□ 0.07
Rnf40-206ENSMUST00000206914 Kdm5bQ80Y84 1544 aa15.5■□□□□ 0.07
Rnf40-206ENSMUST00000206914 Gm38655A0A286YDK6 273 aa15.49■□□□□ 0.07
Rnf40-206ENSMUST00000206914 Iqgap2Q3UQ44 1575 aa15.49■□□□□ 0.07
Rnf40-206ENSMUST00000206914 TnnQ80Z71 1560 aa15.48■□□□□ 0.07
Rnf40-206ENSMUST00000206914 Arhgap35Q91YM2 1499 aa15.48■□□□□ 0.07
Rnf40-206ENSMUST00000206914 Arap1Q4LDD4 1452 aa15.45■□□□□ 0.06
Rnf40-206ENSMUST00000206914 Arhgef5E9Q7D5 1581 aa15.44■□□□□ 0.06
Rnf40-206ENSMUST00000206914 NrkQ9R0G8 1455 aa15.44■□□□□ 0.06
Rnf40-206ENSMUST00000206914 Stra8P70278 393 aa15.44■□□□□ 0.06
Rnf40-206ENSMUST00000206914 TchhA0A0B4J1F9 1599 aa15.43■□□□□ 0.06
Rnf40-206ENSMUST00000206914 Hnrnpul2Q00PI9 745 aaKnown RBP15.42■□□□□ 0.06
Rnf40-206ENSMUST00000206914 Baz1bQ9Z277 1479 aa15.4■□□□□ 0.06
Rnf40-206ENSMUST00000206914 Setd5Q5XJV7 1441 aa15.38■□□□□ 0.05
Rnf40-206ENSMUST00000206914 Map3k1P53349 1493 aa15.37■□□□□ 0.05
Rnf40-206ENSMUST00000206914 Eid3Q3V124 375 aa15.37■□□□□ 0.05
Rnf40-206ENSMUST00000206914 Fam71e1A1L3C1 212 aa15.35■□□□□ 0.05
Rnf40-206ENSMUST00000206914 Tiam1Q60610 1591 aa15.35■□□□□ 0.05
Rnf40-206ENSMUST00000206914 Atad2bE9Q166 1460 aaKnown RBP15.34■□□□□ 0.05
Rnf40-206ENSMUST00000206914 PtprkP35822 1457 aa15.32■□□□□ 0.04
Rnf40-206ENSMUST00000206914 SafbD3YXK2 937 aaKnown RBP15.31■□□□□ 0.04
Rnf40-206ENSMUST00000206914 Shroom4Q1W617 1475 aa15.3■□□□□ 0.04
Rnf40-206ENSMUST00000206914 Anp32aO35381 247 aa15.3■□□□□ 0.04
Rnf40-206ENSMUST00000206914 Rpap1Q80TE0 1409 aa15.29■□□□□ 0.04
Rnf40-206ENSMUST00000206914 UacaQ8CGB3 1411 aa15.28■□□□□ 0.04
Rnf40-206ENSMUST00000206914 Ap3b1Q9Z1T1 1105 aa15.28■□□□□ 0.04
Retrieved 100 of 22,080 RNA–protein pairs in 55.4 ms