RNA–Protein interactions for RNA: ENSMUST00000205714.1

Calca-204, Transcript of Calcitonin, mousemouse

TSL 2 BASIC

Gene Calca, Length 416 nt, Biotype protein coding, Subcellular localisation Paraspeckles .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Calca-204ENSMUST00000205714 Gm35339A0A140LHH9 1649 aa29■■■□□ 2.23
Calca-204ENSMUST00000205714 NischQ80TM9 1593 aa28.45■■■□□ 2.14
Calca-204ENSMUST00000205714 Abcc9P70170 1546 aa27.64■■■□□ 2.02
Calca-204ENSMUST00000205714 Abcc8B2RUS7 1588 aa27.62■■■□□ 2.01
Calca-204ENSMUST00000205714 ScribQ80U72 1612 aa27.01■■□□□ 1.92
Calca-204ENSMUST00000205714 Kdm5dQ62240 1548 aa25.98■■□□□ 1.75
Calca-204ENSMUST00000205714 NacadQ5SWP3 1504 aa25.94■■□□□ 1.74
Calca-204ENSMUST00000205714 Sycp2Q9CUU3 1500 aa25.49■■□□□ 1.67
Calca-204ENSMUST00000205714 Dnajc5bQ9CQ94 199 aa25.39■■□□□ 1.66
Calca-204ENSMUST00000205714 BicraF8VPZ9 1578 aa25.31■■□□□ 1.64
Calca-204ENSMUST00000205714 Dcaf1Q80TR8 1506 aa25.24■■□□□ 1.63
Calca-204ENSMUST00000205714 Rb1cc1Q9ESK9 1588 aa24.8■■□□□ 1.56
Calca-204ENSMUST00000205714 Thoc2B1AZI6 1594 aaKnown RBP24.62■■□□□ 1.53
Calca-204ENSMUST00000205714 Pds5bQ4VA53 1446 aaKnown RBP24.52■■□□□ 1.52
Calca-204ENSMUST00000205714 Baz1aO88379 1555 aa24.35■■□□□ 1.49
Calca-204ENSMUST00000205714 Cc2d2aQ8CFW7 1633 aa24.25■■□□□ 1.47
Calca-204ENSMUST00000205714 Atad2bE9Q166 1460 aaKnown RBP24.22■■□□□ 1.47
Calca-204ENSMUST00000205714 Rhox8Q6VSS7 320 aa24.22■■□□□ 1.47
Calca-204ENSMUST00000205714 Ccdc180J3QNE4 1664 aa24.16■■□□□ 1.46
Calca-204ENSMUST00000205714 Zcchc6Q5BLK4 1491 aaKnown RBP24.16■■□□□ 1.46
Calca-204ENSMUST00000205714 Crybg2B7ZCC2 1516 aa24.14■■□□□ 1.45
Calca-204ENSMUST00000205714 Ercc6F8VPZ5 1481 aa24.07■■□□□ 1.44
Calca-204ENSMUST00000205714 Smarca2Q6DIC0 1577 aa23.98■■□□□ 1.43
Calca-204ENSMUST00000205714 Smarca4Q3TKT4 1613 aaKnown RBP23.92■■□□□ 1.42
Calca-204ENSMUST00000205714 Fam135aQ6NS59 1506 aa23.91■■□□□ 1.42
Calca-204ENSMUST00000205714 Iqgap2Q3UQ44 1575 aa23.89■■□□□ 1.41
Calca-204ENSMUST00000205714 Cecr2E9Q2Z1 1453 aa23.82■■□□□ 1.4
Calca-204ENSMUST00000205714 Wdr62Q3U3T8 1523 aa23.73■■□□□ 1.39
Calca-204ENSMUST00000205714 Frmpd1A2AKB4 1549 aa23.71■■□□□ 1.39
Calca-204ENSMUST00000205714 Phldb1Q6PDH0 1371 aaKnown RBP23.58■■□□□ 1.37
Calca-204ENSMUST00000205714 Unc13aQ4KUS2 1712 aa23.53■■□□□ 1.36
Calca-204ENSMUST00000205714 Ubl4bQ9CQ84 188 aa23.48■■□□□ 1.35
Calca-204ENSMUST00000205714 Mrc2Q64449 1479 aa23.36■■□□□ 1.33
Calca-204ENSMUST00000205714 Baz1bQ9Z277 1479 aa23.33■■□□□ 1.33
Calca-204ENSMUST00000205714 Trim41Q5NCC3 630 aa23.3■■□□□ 1.32
Calca-204ENSMUST00000205714 Dnajc5P60904 198 aa23.24■■□□□ 1.31
Calca-204ENSMUST00000205714 Synj1Q8CHC4 1574 aa23.1■■□□□ 1.29
Calca-204ENSMUST00000205714 Cttnbp2B9EJA2 1648 aa23.09■■□□□ 1.29
Calca-204ENSMUST00000205714 CftrP26361 1476 aa23.08■■□□□ 1.29
Calca-204ENSMUST00000205714 Lrriq1Q0P5X1 1673 aa23■■□□□ 1.27
Calca-204ENSMUST00000205714 Rtl1Q7M732 1744 aa22.9■■□□□ 1.26
Calca-204ENSMUST00000205714 Kif21aQ9QXL2 1672 aa22.84■■□□□ 1.25
Calca-204ENSMUST00000205714 Brd4Q9ESU6 1400 aaKnown RBP22.81■■□□□ 1.24
Calca-204ENSMUST00000205714 Ccdc136Q3TVA9 1136 aa22.79■■□□□ 1.24
Calca-204ENSMUST00000205714 Cux2P70298 1426 aa22.79■■□□□ 1.24
Calca-204ENSMUST00000205714 Rsf1E9PWW9 1441 aaKnown RBP22.73■■□□□ 1.23
Calca-204ENSMUST00000205714 Kif15Q6P9L6 1387 aa22.72■■□□□ 1.23
Calca-204ENSMUST00000205714 Esf1Q3V1V3 845 aaKnown RBP22.69■■□□□ 1.22
Calca-204ENSMUST00000205714 Eif4g3Q80XI3 1579 aaKnown RBP22.59■■□□□ 1.21
Calca-204ENSMUST00000205714 Lamc3Q9R0B6 1581 aa22.51■■□□□ 1.19
Calca-204ENSMUST00000205714 Npm1Q61937 292 aaKnown RBP22.47■■□□□ 1.19
Calca-204ENSMUST00000205714 Shroom2A2ALU4 1481 aa22.47■■□□□ 1.19
Calca-204ENSMUST00000205714 Urb2E9Q7L1 1524 aaKnown RBP22.4■■□□□ 1.18
Calca-204ENSMUST00000205714 Cep164Q5DU05 1446 aa22.35■■□□□ 1.17
Calca-204ENSMUST00000205714 Col17a1Q07563 1470 aa22.34■■□□□ 1.17
Calca-204ENSMUST00000205714 Plb1Q3TTY0 1478 aa22.33■■□□□ 1.16
Calca-204ENSMUST00000205714 Il27Q8K3I6 234 aa22.31■■□□□ 1.16
Calca-204ENSMUST00000205714 Dhx29Q6PGC1 1365 aaKnown RBP22.27■■□□□ 1.16
Calca-204ENSMUST00000205714 Top2bQ64511 1612 aa22.21■■□□□ 1.15
Calca-204ENSMUST00000205714 Pabpn1Q8CCS6 302 aaKnown RBP22.2■■□□□ 1.14
Calca-204ENSMUST00000205714 Crocc2F6XLV1 1638 aa22.2■■□□□ 1.14
Calca-204ENSMUST00000205714 Pelp1Q9DBD5 1123 aaKnown RBP22.15■■□□□ 1.14
Calca-204ENSMUST00000205714 TnnQ80Z71 1560 aa22.15■■□□□ 1.14
Calca-204ENSMUST00000205714 Ccdc18Q640L5 1455 aa22.13■■□□□ 1.13
Calca-204ENSMUST00000205714 LrpprcQ6PB66 1392 aaKnown RBP22.11■■□□□ 1.13
Calca-204ENSMUST00000205714 Camsap1A2AHC3 1581 aa22.1■■□□□ 1.13
Calca-204ENSMUST00000205714 Rusc2Q80U22 1514 aa22.09■■□□□ 1.13
Calca-204ENSMUST00000205714 Ift140E9PY46 1464 aa21.99■■□□□ 1.11
Calca-204ENSMUST00000205714 Cngb1E1AZ71 1325 aa21.98■■□□□ 1.11
Calca-204ENSMUST00000205714 PogzQ8BZH4 1409 aaKnown RBP21.96■■□□□ 1.11
Calca-204ENSMUST00000205714 Golga3P55937 1487 aa21.92■■□□□ 1.1
Calca-204ENSMUST00000205714 Setd1bQ8CFT2 1985 aa21.9■■□□□ 1.1
Calca-204ENSMUST00000205714 Zcchc11B2RX14 1644 aaKnown RBP21.9■■□□□ 1.1
Calca-204ENSMUST00000205714 Duox2A2AQ99 1517 aa21.87■■□□□ 1.09
Calca-204ENSMUST00000205714 Disp1Q3TDN0 1521 aa21.85■■□□□ 1.09
Calca-204ENSMUST00000205714 Pcdh10E9PXQ7 1057 aa21.82■■□□□ 1.08
Calca-204ENSMUST00000205714 Samd9lQ69Z37 1561 aa21.79■■□□□ 1.08
Calca-204ENSMUST00000205714 Fmn1Q05860 1466 aa21.74■■□□□ 1.07
Calca-204ENSMUST00000205714 Grin2bQ01097 1482 aa21.72■■□□□ 1.07
Calca-204ENSMUST00000205714 Nup160Q9Z0W3 1402 aaKnown RBP21.72■■□□□ 1.07
Calca-204ENSMUST00000205714 Adgrl3Q80TS3 1537 aa21.7■■□□□ 1.07
Calca-204ENSMUST00000205714 Pbrm1Q8BSQ9 1634 aaKnown RBP21.69■■□□□ 1.06
Calca-204ENSMUST00000205714 Arhgef5E9Q7D5 1581 aa21.68■■□□□ 1.06
Calca-204ENSMUST00000205714 Ttbk1Q6PCN3 1308 aa21.67■■□□□ 1.06
Calca-204ENSMUST00000205714 Rad54l2Q99NG0 1466 aa21.66■■□□□ 1.06
Calca-204ENSMUST00000205714 Cc2d2bA0A286YDU8 1405 aa21.65■■□□□ 1.06
Calca-204ENSMUST00000205714 Cep170Q6A065 1588 aa21.65■■□□□ 1.06
Calca-204ENSMUST00000205714 PtprkP35822 1457 aa21.62■■□□□ 1.05
Calca-204ENSMUST00000205714 Gapvd1Q6PAR5 1458 aa21.58■■□□□ 1.05
Calca-204ENSMUST00000205714 Gm156Q58A37 223 aa21.56■■□□□ 1.04
Calca-204ENSMUST00000205714 Grin2aP35436 1464 aa21.56■■□□□ 1.04
Calca-204ENSMUST00000205714 Magi3Q9EQJ9 1476 aa21.56■■□□□ 1.04
Calca-204ENSMUST00000205714 AqrQ8CFQ3 1481 aaKnown RBP21.55■■□□□ 1.04
Calca-204ENSMUST00000205714 Fgd6Q69ZL1 1399 aa21.53■■□□□ 1.04
Calca-204ENSMUST00000205714 PtprtQ99M80 1454 aa21.52■■□□□ 1.04
Calca-204ENSMUST00000205714 Efcab5A0JP43 1406 aa21.5■■□□□ 1.03
Calca-204ENSMUST00000205714 AknaQ80VW7 1404 aa21.49■■□□□ 1.03
Calca-204ENSMUST00000205714 Abcc1O35379 1528 aa21.45■■□□□ 1.02
Calca-204ENSMUST00000205714 Chd1P40201 1711 aa21.42■■□□□ 1.02
Calca-204ENSMUST00000205714 Pprc1Q6NZN1 1644 aa21.42■■□□□ 1.02
Retrieved 100 of 22,080 RNA–protein pairs in 10.1 ms