RNA–Protein interactions for RNA: ENSMUST00000187272.1

1700028D13Rik-202, mousemouse

TSL 1 (best) BASIC

Gene 1700028D13Rik, Length 675 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
1700028D13Rik-202ENSMUST00000187272 Gm35339A0A140LHH9 1649 aa16.53■□□□□ 0.24
1700028D13Rik-202ENSMUST00000187272 NischQ80TM9 1593 aa16.17■□□□□ 0.18
1700028D13Rik-202ENSMUST00000187272 Abcc9P70170 1546 aa15.74■□□□□ 0.11
1700028D13Rik-202ENSMUST00000187272 Abcc8B2RUS7 1588 aa15.68■□□□□ 0.1
1700028D13Rik-202ENSMUST00000187272 ScribQ80U72 1612 aa15.22■□□□□ 0.03
1700028D13Rik-202ENSMUST00000187272 Kdm5dQ62240 1548 aa14.63□□□□□ -0.07
1700028D13Rik-202ENSMUST00000187272 NacadQ5SWP3 1504 aa14.56□□□□□ -0.08
1700028D13Rik-202ENSMUST00000187272 Dcaf1Q80TR8 1506 aa14.46□□□□□ -0.1
1700028D13Rik-202ENSMUST00000187272 Sycp2Q9CUU3 1500 aa14.31□□□□□ -0.12
1700028D13Rik-202ENSMUST00000187272 BicraF8VPZ9 1578 aa14.2□□□□□ -0.14
1700028D13Rik-202ENSMUST00000187272 Rb1cc1Q9ESK9 1588 aa14.13□□□□□ -0.15
1700028D13Rik-202ENSMUST00000187272 Rhox8Q6VSS7 320 aa14.12□□□□□ -0.15
1700028D13Rik-202ENSMUST00000187272 Dnajc5bQ9CQ94 199 aa14.09□□□□□ -0.15
1700028D13Rik-202ENSMUST00000187272 Ccdc180J3QNE4 1664 aa13.95□□□□□ -0.18
1700028D13Rik-202ENSMUST00000187272 Baz1aO88379 1555 aa13.92□□□□□ -0.18
1700028D13Rik-202ENSMUST00000187272 Crybg2B7ZCC2 1516 aa13.79□□□□□ -0.2
1700028D13Rik-202ENSMUST00000187272 Zcchc6Q5BLK4 1491 aaKnown RBP13.74□□□□□ -0.21
1700028D13Rik-202ENSMUST00000187272 Pds5bQ4VA53 1446 aaKnown RBP13.7□□□□□ -0.22
1700028D13Rik-202ENSMUST00000187272 Thoc2B1AZI6 1594 aaKnown RBP13.66□□□□□ -0.22
1700028D13Rik-202ENSMUST00000187272 Smarca2Q6DIC0 1577 aa13.57□□□□□ -0.24
1700028D13Rik-202ENSMUST00000187272 Atad2bE9Q166 1460 aaKnown RBP13.53□□□□□ -0.24
1700028D13Rik-202ENSMUST00000187272 Dnajc5P60904 198 aa13.51□□□□□ -0.25
1700028D13Rik-202ENSMUST00000187272 Ercc6F8VPZ5 1481 aa13.49□□□□□ -0.25
1700028D13Rik-202ENSMUST00000187272 Cecr2E9Q2Z1 1453 aa13.48□□□□□ -0.25
1700028D13Rik-202ENSMUST00000187272 Smarca4Q3TKT4 1613 aaKnown RBP13.48□□□□□ -0.25
1700028D13Rik-202ENSMUST00000187272 Rtl1Q7M732 1744 aa13.44□□□□□ -0.26
1700028D13Rik-202ENSMUST00000187272 Iqgap2Q3UQ44 1575 aa13.41□□□□□ -0.26
1700028D13Rik-202ENSMUST00000187272 Cc2d2aQ8CFW7 1633 aa13.38□□□□□ -0.27
1700028D13Rik-202ENSMUST00000187272 Fam135aQ6NS59 1506 aa13.32□□□□□ -0.28
1700028D13Rik-202ENSMUST00000187272 Wdr62Q3U3T8 1523 aa13.31□□□□□ -0.28
1700028D13Rik-202ENSMUST00000187272 Frmpd1A2AKB4 1549 aa13.26□□□□□ -0.29
1700028D13Rik-202ENSMUST00000187272 Unc13aQ4KUS2 1712 aa13.24□□□□□ -0.29
1700028D13Rik-202ENSMUST00000187272 Synj1Q8CHC4 1574 aa13.17□□□□□ -0.3
1700028D13Rik-202ENSMUST00000187272 Cttnbp2B9EJA2 1648 aa13.16□□□□□ -0.3
1700028D13Rik-202ENSMUST00000187272 Phldb1Q6PDH0 1371 aaKnown RBP13.16□□□□□ -0.3
1700028D13Rik-202ENSMUST00000187272 Ccdc136Q3TVA9 1136 aa13.14□□□□□ -0.31
1700028D13Rik-202ENSMUST00000187272 CftrP26361 1476 aa13.14□□□□□ -0.31
1700028D13Rik-202ENSMUST00000187272 Brd4Q9ESU6 1400 aaKnown RBP13.13□□□□□ -0.31
1700028D13Rik-202ENSMUST00000187272 Ubl4bQ9CQ84 188 aa13.09□□□□□ -0.31
1700028D13Rik-202ENSMUST00000187272 Baz1bQ9Z277 1479 aa13.09□□□□□ -0.31
1700028D13Rik-202ENSMUST00000187272 Trim41Q5NCC3 630 aa13.07□□□□□ -0.32
1700028D13Rik-202ENSMUST00000187272 Esf1Q3V1V3 845 aaKnown RBP13.04□□□□□ -0.32
1700028D13Rik-202ENSMUST00000187272 Mrc2Q64449 1479 aa12.98□□□□□ -0.33
1700028D13Rik-202ENSMUST00000187272 Rsf1E9PWW9 1441 aaKnown RBP12.84□□□□□ -0.35
1700028D13Rik-202ENSMUST00000187272 Kif15Q6P9L6 1387 aa12.82□□□□□ -0.36
1700028D13Rik-202ENSMUST00000187272 Cux2P70298 1426 aa12.79□□□□□ -0.36
1700028D13Rik-202ENSMUST00000187272 Lamc3Q9R0B6 1581 aa12.77□□□□□ -0.36
1700028D13Rik-202ENSMUST00000187272 Kif21aQ9QXL2 1672 aa12.73□□□□□ -0.37
1700028D13Rik-202ENSMUST00000187272 Top2bQ64511 1612 aa12.73□□□□□ -0.37
1700028D13Rik-202ENSMUST00000187272 Cngb1E1AZ71 1325 aa12.72□□□□□ -0.37
1700028D13Rik-202ENSMUST00000187272 Npm1Q61937 292 aaKnown RBP12.72□□□□□ -0.37
1700028D13Rik-202ENSMUST00000187272 Lrriq1Q0P5X1 1673 aa12.72□□□□□ -0.37
1700028D13Rik-202ENSMUST00000187272 TnnQ80Z71 1560 aa12.72□□□□□ -0.37
1700028D13Rik-202ENSMUST00000187272 Cep164Q5DU05 1446 aa12.65□□□□□ -0.38
1700028D13Rik-202ENSMUST00000187272 Il27Q8K3I6 234 aa12.64□□□□□ -0.39
1700028D13Rik-202ENSMUST00000187272 Golga3P55937 1487 aa12.64□□□□□ -0.39
1700028D13Rik-202ENSMUST00000187272 Ccdc18Q640L5 1455 aa12.62□□□□□ -0.39
1700028D13Rik-202ENSMUST00000187272 Camsap1A2AHC3 1581 aa12.56□□□□□ -0.4
1700028D13Rik-202ENSMUST00000187272 Eif4g3Q80XI3 1579 aaKnown RBP12.54□□□□□ -0.4
1700028D13Rik-202ENSMUST00000187272 Fmn1Q05860 1466 aa12.52□□□□□ -0.41
1700028D13Rik-202ENSMUST00000187272 Crocc2F6XLV1 1638 aa12.51□□□□□ -0.41
1700028D13Rik-202ENSMUST00000187272 Dhx29Q6PGC1 1365 aaKnown RBP12.5□□□□□ -0.41
1700028D13Rik-202ENSMUST00000187272 Urb2E9Q7L1 1524 aaKnown RBP12.49□□□□□ -0.41
1700028D13Rik-202ENSMUST00000187272 LrpprcQ6PB66 1392 aaKnown RBP12.47□□□□□ -0.41
1700028D13Rik-202ENSMUST00000187272 Plb1Q3TTY0 1478 aa12.45□□□□□ -0.42
1700028D13Rik-202ENSMUST00000187272 PogzQ8BZH4 1409 aaKnown RBP12.39□□□□□ -0.43
1700028D13Rik-202ENSMUST00000187272 Ift140E9PY46 1464 aa12.37□□□□□ -0.43
1700028D13Rik-202ENSMUST00000187272 Ccdc88bQ4QRL3 1481 aa12.36□□□□□ -0.43
1700028D13Rik-202ENSMUST00000187272 Samd9lQ69Z37 1561 aa12.35□□□□□ -0.43
1700028D13Rik-202ENSMUST00000187272 Duox2A2AQ99 1517 aa12.35□□□□□ -0.43
1700028D13Rik-202ENSMUST00000187272 Grin2bQ01097 1482 aa12.34□□□□□ -0.43
1700028D13Rik-202ENSMUST00000187272 Setd1bQ8CFT2 1985 aa12.34□□□□□ -0.43
1700028D13Rik-202ENSMUST00000187272 Rusc2Q80U22 1514 aa12.33□□□□□ -0.44
1700028D13Rik-202ENSMUST00000187272 Top2aQ01320 1528 aaKnown RBP12.32□□□□□ -0.44
1700028D13Rik-202ENSMUST00000187272 Shroom2A2ALU4 1481 aa12.31□□□□□ -0.44
1700028D13Rik-202ENSMUST00000187272 Pelp1Q9DBD5 1123 aaKnown RBP12.3□□□□□ -0.44
1700028D13Rik-202ENSMUST00000187272 Pbrm1Q8BSQ9 1634 aaKnown RBP12.29□□□□□ -0.44
1700028D13Rik-202ENSMUST00000187272 Pabpn1Q8CCS6 302 aaKnown RBP12.26□□□□□ -0.45
1700028D13Rik-202ENSMUST00000187272 Disp1Q3TDN0 1521 aa12.25□□□□□ -0.45
1700028D13Rik-202ENSMUST00000187272 Zeb1Q64318 1117 aa12.24□□□□□ -0.45
1700028D13Rik-202ENSMUST00000187272 Efcab5A0JP43 1406 aa12.23□□□□□ -0.45
1700028D13Rik-202ENSMUST00000187272 Gpatch8A2A6A1 1505 aa12.22□□□□□ -0.45
1700028D13Rik-202ENSMUST00000187272 Nup160Q9Z0W3 1402 aaKnown RBP12.22□□□□□ -0.45
1700028D13Rik-202ENSMUST00000187272 PtprkP35822 1457 aa12.2□□□□□ -0.46
1700028D13Rik-202ENSMUST00000187272 Magi3Q9EQJ9 1476 aa12.2□□□□□ -0.46
1700028D13Rik-202ENSMUST00000187272 Cc2d2bA0A286YDU8 1405 aa12.2□□□□□ -0.46
1700028D13Rik-202ENSMUST00000187272 Rad54l2Q99NG0 1466 aa12.19□□□□□ -0.46
1700028D13Rik-202ENSMUST00000187272 NrkQ9R0G8 1455 aa12.19□□□□□ -0.46
1700028D13Rik-202ENSMUST00000187272 Pcdh10E9PXQ7 1057 aa12.18□□□□□ -0.46
1700028D13Rik-202ENSMUST00000187272 Chic1Q8CBW7 227 aa12.18□□□□□ -0.46
1700028D13Rik-202ENSMUST00000187272 Col17a1Q07563 1470 aa12.18□□□□□ -0.46
1700028D13Rik-202ENSMUST00000187272 Shroom4Q1W617 1475 aa12.16□□□□□ -0.46
1700028D13Rik-202ENSMUST00000187272 Npm2Q80W85 207 aa12.16□□□□□ -0.46
1700028D13Rik-202ENSMUST00000187272 Grin2aP35436 1464 aa12.15□□□□□ -0.46
1700028D13Rik-202ENSMUST00000187272 Pla2r1Q62028 1487 aa12.13□□□□□ -0.47
1700028D13Rik-202ENSMUST00000187272 AqrQ8CFQ3 1481 aaKnown RBP12.13□□□□□ -0.47
1700028D13Rik-202ENSMUST00000187272 SynmQ70IV5 1561 aa12.12□□□□□ -0.47
1700028D13Rik-202ENSMUST00000187272 AknaQ80VW7 1404 aa12.08□□□□□ -0.48
1700028D13Rik-202ENSMUST00000187272 Fgd6Q69ZL1 1399 aa12.07□□□□□ -0.48
1700028D13Rik-202ENSMUST00000187272 Zcchc11B2RX14 1644 aaKnown RBP12.07□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 35.8 ms