RNA–Protein interactions for RNA: ENSMUST00000173523.1

Malat1-204, mousemouse

TSL 3 BASIC

Gene Malat1, Length 656 nt, Biotype lincRNA, Subcellular localisation Axon, Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Malat1-204ENSMUST00000173523 Gm35339A0A140LHH9 1649 aa27.66■■■□□ 2.02
Malat1-204ENSMUST00000173523 NischQ80TM9 1593 aa27.37■■□□□ 1.97
Malat1-204ENSMUST00000173523 Abcc9P70170 1546 aa26.47■■□□□ 1.83
Malat1-204ENSMUST00000173523 Abcc8B2RUS7 1588 aa26.46■■□□□ 1.83
Malat1-204ENSMUST00000173523 ScribQ80U72 1612 aa25.41■■□□□ 1.66
Malat1-204ENSMUST00000173523 NacadQ5SWP3 1504 aa24.71■■□□□ 1.55
Malat1-204ENSMUST00000173523 Kdm5dQ62240 1548 aa24.62■■□□□ 1.53
Malat1-204ENSMUST00000173523 Dcaf1Q80TR8 1506 aa24.4■■□□□ 1.5
Malat1-204ENSMUST00000173523 Sycp2Q9CUU3 1500 aa24.22■■□□□ 1.47
Malat1-204ENSMUST00000173523 BicraF8VPZ9 1578 aa23.84■■□□□ 1.41
Malat1-204ENSMUST00000173523 Rb1cc1Q9ESK9 1588 aa23.82■■□□□ 1.4
Malat1-204ENSMUST00000173523 Mapk8ip2Q9ERE9 830 aa23.76■■□□□ 1.39
Malat1-204ENSMUST00000173523 Rhox8Q6VSS7 320 aa23.74■■□□□ 1.39
Malat1-204ENSMUST00000173523 Chic1Q8CBW7 227 aa23.55■■□□□ 1.36
Malat1-204ENSMUST00000173523 Crybg2B7ZCC2 1516 aa23.52■■□□□ 1.36
Malat1-204ENSMUST00000173523 Baz1aO88379 1555 aa23.52■■□□□ 1.36
Malat1-204ENSMUST00000173523 Ccdc180J3QNE4 1664 aa23.5■■□□□ 1.35
Malat1-204ENSMUST00000173523 Pds5bQ4VA53 1446 aaKnown RBP23.24■■□□□ 1.31
Malat1-204ENSMUST00000173523 Zcchc6Q5BLK4 1491 aaKnown RBP23.17■■□□□ 1.3
Malat1-204ENSMUST00000173523 Dnajc5bQ9CQ94 199 aa23.17■■□□□ 1.3
Malat1-204ENSMUST00000173523 Atad2bE9Q166 1460 aaKnown RBP23.02■■□□□ 1.28
Malat1-204ENSMUST00000173523 Thoc2B1AZI6 1594 aaKnown RBP22.93■■□□□ 1.26
Malat1-204ENSMUST00000173523 Smarca2Q6DIC0 1577 aa22.81■■□□□ 1.24
Malat1-204ENSMUST00000173523 Smarca4Q3TKT4 1613 aaKnown RBP22.79■■□□□ 1.24
Malat1-204ENSMUST00000173523 Cecr2E9Q2Z1 1453 aa22.77■■□□□ 1.24
Malat1-204ENSMUST00000173523 Ercc6F8VPZ5 1481 aa22.7■■□□□ 1.22
Malat1-204ENSMUST00000173523 Iqgap2Q3UQ44 1575 aa22.65■■□□□ 1.22
Malat1-204ENSMUST00000173523 Cc2d2aQ8CFW7 1633 aa22.57■■□□□ 1.2
Malat1-204ENSMUST00000173523 Frmpd1A2AKB4 1549 aa22.47■■□□□ 1.19
Malat1-204ENSMUST00000173523 Wdr62Q3U3T8 1523 aa22.47■■□□□ 1.19
Malat1-204ENSMUST00000173523 Fam135aQ6NS59 1506 aa22.45■■□□□ 1.18
Malat1-204ENSMUST00000173523 Rtl1Q7M732 1744 aa22.4■■□□□ 1.18
Malat1-204ENSMUST00000173523 Phldb1Q6PDH0 1371 aaKnown RBP22.38■■□□□ 1.17
Malat1-204ENSMUST00000173523 CftrP26361 1476 aa22.28■■□□□ 1.16
Malat1-204ENSMUST00000173523 Baz1bQ9Z277 1479 aa22.28■■□□□ 1.16
Malat1-204ENSMUST00000173523 Brd4Q9ESU6 1400 aaKnown RBP22.25■■□□□ 1.15
Malat1-204ENSMUST00000173523 Ccdc136Q3TVA9 1136 aa22.22■■□□□ 1.15
Malat1-204ENSMUST00000173523 Ubl4bQ9CQ84 188 aa22.2■■□□□ 1.14
Malat1-204ENSMUST00000173523 Cttnbp2B9EJA2 1648 aa22.18■■□□□ 1.14
Malat1-204ENSMUST00000173523 Synj1Q8CHC4 1574 aa22.18■■□□□ 1.14
Malat1-204ENSMUST00000173523 Unc13aQ4KUS2 1712 aa22.03■■□□□ 1.12
Malat1-204ENSMUST00000173523 Trim41Q5NCC3 630 aa21.96■■□□□ 1.11
Malat1-204ENSMUST00000173523 Mrc2Q64449 1479 aa21.95■■□□□ 1.1
Malat1-204ENSMUST00000173523 Esf1Q3V1V3 845 aaKnown RBP21.93■■□□□ 1.1
Malat1-204ENSMUST00000173523 Rsf1E9PWW9 1441 aaKnown RBP21.75■■□□□ 1.07
Malat1-204ENSMUST00000173523 Kif15Q6P9L6 1387 aa21.69■■□□□ 1.06
Malat1-204ENSMUST00000173523 Cux2P70298 1426 aa21.66■■□□□ 1.06
Malat1-204ENSMUST00000173523 Lamc3Q9R0B6 1581 aa21.6■■□□□ 1.05
Malat1-204ENSMUST00000173523 Npm1Q61937 292 aaKnown RBP21.5■■□□□ 1.03
Malat1-204ENSMUST00000173523 Golga3P55937 1487 aa21.46■■□□□ 1.03
Malat1-204ENSMUST00000173523 Cep164Q5DU05 1446 aa21.39■■□□□ 1.02
Malat1-204ENSMUST00000173523 Lrriq1Q0P5X1 1673 aa21.39■■□□□ 1.01
Malat1-204ENSMUST00000173523 Kif21aQ9QXL2 1672 aa21.38■■□□□ 1.01
Malat1-204ENSMUST00000173523 Cngb1E1AZ71 1325 aa21.38■■□□□ 1.01
Malat1-204ENSMUST00000173523 Top2bQ64511 1612 aa21.38■■□□□ 1.01
Malat1-204ENSMUST00000173523 TnnQ80Z71 1560 aa21.34■■□□□ 1.01
Malat1-204ENSMUST00000173523 Ccdc18Q640L5 1455 aa21.3■■□□□ 1
Malat1-204ENSMUST00000173523 Il27Q8K3I6 234 aa21.26■□□□□ 0.99
Malat1-204ENSMUST00000173523 LrpprcQ6PB66 1392 aaKnown RBP21.22■□□□□ 0.99
Malat1-204ENSMUST00000173523 Dhx29Q6PGC1 1365 aaKnown RBP21.22■□□□□ 0.99
Malat1-204ENSMUST00000173523 Fmn1Q05860 1466 aa21.21■□□□□ 0.99
Malat1-204ENSMUST00000173523 Camsap1A2AHC3 1581 aa21.19■□□□□ 0.98
Malat1-204ENSMUST00000173523 Urb2E9Q7L1 1524 aaKnown RBP21.14■□□□□ 0.97
Malat1-204ENSMUST00000173523 Plb1Q3TTY0 1478 aa21.12■□□□□ 0.97
Malat1-204ENSMUST00000173523 Eif4g3Q80XI3 1579 aaKnown RBP21.1■□□□□ 0.97
Malat1-204ENSMUST00000173523 PogzQ8BZH4 1409 aaKnown RBP21.07■□□□□ 0.96
Malat1-204ENSMUST00000173523 Crocc2F6XLV1 1638 aa21.04■□□□□ 0.96
Malat1-204ENSMUST00000173523 Dnajc5P60904 198 aa20.97■□□□□ 0.95
Malat1-204ENSMUST00000173523 Duox2A2AQ99 1517 aa20.96■□□□□ 0.95
Malat1-204ENSMUST00000173523 Phf23Q8BSN5 401 aa20.96■□□□□ 0.95
Malat1-204ENSMUST00000173523 Ift140E9PY46 1464 aa20.95■□□□□ 0.94
Malat1-204ENSMUST00000173523 Grin2bQ01097 1482 aa20.94■□□□□ 0.94
Malat1-204ENSMUST00000173523 Shroom2A2ALU4 1481 aa20.88■□□□□ 0.93
Malat1-204ENSMUST00000173523 Ccdc88bQ4QRL3 1481 aa20.88■□□□□ 0.93
Malat1-204ENSMUST00000173523 Efcab5A0JP43 1406 aa20.87■□□□□ 0.93
Malat1-204ENSMUST00000173523 Disp1Q3TDN0 1521 aa20.82■□□□□ 0.92
Malat1-204ENSMUST00000173523 Rusc2Q80U22 1514 aa20.81■□□□□ 0.92
Malat1-204ENSMUST00000173523 Top2aQ01320 1528 aaKnown RBP20.78■□□□□ 0.92
Malat1-204ENSMUST00000173523 NrkQ9R0G8 1455 aa20.75■□□□□ 0.91
Malat1-204ENSMUST00000173523 Pabpn1Q8CCS6 302 aaKnown RBP20.75■□□□□ 0.91
Malat1-204ENSMUST00000173523 Samd9lQ69Z37 1561 aa20.72■□□□□ 0.91
Malat1-204ENSMUST00000173523 Cc2d2bA0A286YDU8 1405 aa20.71■□□□□ 0.91
Malat1-204ENSMUST00000173523 Nup160Q9Z0W3 1402 aaKnown RBP20.71■□□□□ 0.91
Malat1-204ENSMUST00000173523 Pbrm1Q8BSQ9 1634 aaKnown RBP20.67■□□□□ 0.9
Malat1-204ENSMUST00000173523 Rad54l2Q99NG0 1466 aa20.64■□□□□ 0.89
Malat1-204ENSMUST00000173523 Shroom4Q1W617 1475 aa20.62■□□□□ 0.89
Malat1-204ENSMUST00000173523 PtprkP35822 1457 aa20.6■□□□□ 0.89
Malat1-204ENSMUST00000173523 Col17a1Q07563 1470 aa20.59■□□□□ 0.89
Malat1-204ENSMUST00000173523 Grin2aP35436 1464 aa20.58■□□□□ 0.89
Malat1-204ENSMUST00000173523 Magi3Q9EQJ9 1476 aa20.57■□□□□ 0.88
Malat1-204ENSMUST00000173523 Pelp1Q9DBD5 1123 aaKnown RBP20.57■□□□□ 0.88
Malat1-204ENSMUST00000173523 Setd1bQ8CFT2 1985 aa20.56■□□□□ 0.88
Malat1-204ENSMUST00000173523 AqrQ8CFQ3 1481 aaKnown RBP20.53■□□□□ 0.88
Malat1-204ENSMUST00000173523 Fgd6Q69ZL1 1399 aa20.49■□□□□ 0.87
Malat1-204ENSMUST00000173523 SynmQ70IV5 1561 aa20.48■□□□□ 0.87
Malat1-204ENSMUST00000173523 HrcG5E8J6 738 aa20.48■□□□□ 0.87
Malat1-204ENSMUST00000173523 Pla2r1Q62028 1487 aa20.45■□□□□ 0.86
Malat1-204ENSMUST00000173523 Zeb1Q64318 1117 aa20.45■□□□□ 0.86
Malat1-204ENSMUST00000173523 Gpatch8A2A6A1 1505 aa20.43■□□□□ 0.86
Malat1-204ENSMUST00000173523 Npm2Q80W85 207 aa20.4■□□□□ 0.86
Retrieved 100 of 22,080 RNA–protein pairs in 14.6 ms