RNA–Protein interactions for RNA: ENSMUST00000170873.9

Vps50-203, Transcript of Syndetin, mousemouse

TSL 1 (best) BASIC

Gene Vps50, Length 3,687 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps50-203ENSMUST00000170873 Gm35339A0A140LHH9 1649 aa13.34□□□□□ -0.27
Vps50-203ENSMUST00000170873 NischQ80TM9 1593 aa13.14□□□□□ -0.31
Vps50-203ENSMUST00000170873 Abcc9P70170 1546 aa12.91□□□□□ -0.34
Vps50-203ENSMUST00000170873 Abcc8B2RUS7 1588 aa12.57□□□□□ -0.4
Vps50-203ENSMUST00000170873 Rtl1Q7M732 1744 aa12.25□□□□□ -0.45
Vps50-203ENSMUST00000170873 Dcaf1Q80TR8 1506 aa11.9□□□□□ -0.5
Vps50-203ENSMUST00000170873 Ccdc180J3QNE4 1664 aa11.85□□□□□ -0.51
Vps50-203ENSMUST00000170873 ScribQ80U72 1612 aa11.78□□□□□ -0.52
Vps50-203ENSMUST00000170873 Zcchc6Q5BLK4 1491 aaKnown RBP11.69□□□□□ -0.54
Vps50-203ENSMUST00000170873 Rb1cc1Q9ESK9 1588 aa11.52□□□□□ -0.56
Vps50-203ENSMUST00000170873 Rhox8Q6VSS7 320 aa11.5□□□□□ -0.57
Vps50-203ENSMUST00000170873 Kdm5dQ62240 1548 aa11.45□□□□□ -0.58
Vps50-203ENSMUST00000170873 Baz1aO88379 1555 aa11.45□□□□□ -0.58
Vps50-203ENSMUST00000170873 Crybg2B7ZCC2 1516 aa11.37□□□□□ -0.59
Vps50-203ENSMUST00000170873 NacadQ5SWP3 1504 aa11.36□□□□□ -0.59
Vps50-203ENSMUST00000170873 Smarca2Q6DIC0 1577 aa11.25□□□□□ -0.61
Vps50-203ENSMUST00000170873 Sycp2Q9CUU3 1500 aa11.14□□□□□ -0.63
Vps50-203ENSMUST00000170873 HrcG5E8J6 738 aa11.05□□□□□ -0.64
Vps50-203ENSMUST00000170873 BicraF8VPZ9 1578 aa10.93□□□□□ -0.66
Vps50-203ENSMUST00000170873 Rpgrip1Q9EPQ2 1331 aa10.89□□□□□ -0.67
Vps50-203ENSMUST00000170873 Cep164Q5DU05 1446 aa10.82□□□□□ -0.68
Vps50-203ENSMUST00000170873 Top2bQ64511 1612 aa10.79□□□□□ -0.68
Vps50-203ENSMUST00000170873 Brd4Q9ESU6 1400 aaKnown RBP10.76□□□□□ -0.69
Vps50-203ENSMUST00000170873 Synj1Q8CHC4 1574 aa10.76□□□□□ -0.69
Vps50-203ENSMUST00000170873 Cecr2E9Q2Z1 1453 aa10.75□□□□□ -0.69
Vps50-203ENSMUST00000170873 Cttnbp2B9EJA2 1648 aa10.75□□□□□ -0.69
Vps50-203ENSMUST00000170873 Ccdc136Q3TVA9 1136 aa10.7□□□□□ -0.7
Vps50-203ENSMUST00000170873 Trim41Q5NCC3 630 aa10.69□□□□□ -0.7
Vps50-203ENSMUST00000170873 Acin1Q9JIX8 1338 aaKnown RBP10.68□□□□□ -0.7
Vps50-203ENSMUST00000170873 Golga3P55937 1487 aa10.67□□□□□ -0.7
Vps50-203ENSMUST00000170873 CftrP26361 1476 aa10.66□□□□□ -0.7
Vps50-203ENSMUST00000170873 Smarca4Q3TKT4 1613 aaKnown RBP10.65□□□□□ -0.7
Vps50-203ENSMUST00000170873 Rsf1E9PWW9 1441 aaKnown RBP10.61□□□□□ -0.71
Vps50-203ENSMUST00000170873 Cc2d2aQ8CFW7 1633 aa10.55□□□□□ -0.72
Vps50-203ENSMUST00000170873 Ccdc88bQ4QRL3 1481 aa10.54□□□□□ -0.72
Vps50-203ENSMUST00000170873 TnnQ80Z71 1560 aa10.48□□□□□ -0.73
Vps50-203ENSMUST00000170873 Top2aQ01320 1528 aaKnown RBP10.48□□□□□ -0.73
Vps50-203ENSMUST00000170873 Iqgap2Q3UQ44 1575 aa10.47□□□□□ -0.73
Vps50-203ENSMUST00000170873 Eif4g1Q6NZJ6 1600 aaKnown RBP10.46□□□□□ -0.73
Vps50-203ENSMUST00000170873 Fmn1Q05860 1466 aa10.44□□□□□ -0.74
Vps50-203ENSMUST00000170873 Rapgef2Q8CHG7 1496 aa10.41□□□□□ -0.74
Vps50-203ENSMUST00000170873 Chic1Q8CBW7 227 aa10.39□□□□□ -0.75
Vps50-203ENSMUST00000170873 Atad2bE9Q166 1460 aaKnown RBP10.38□□□□□ -0.75
Vps50-203ENSMUST00000170873 Unc13aQ4KUS2 1712 aa10.35□□□□□ -0.75
Vps50-203ENSMUST00000170873 Wdr62Q3U3T8 1523 aa10.31□□□□□ -0.76
Vps50-203ENSMUST00000170873 Lamc3Q9R0B6 1581 aa10.29□□□□□ -0.76
Vps50-203ENSMUST00000170873 Pds5bQ4VA53 1446 aaKnown RBP10.28□□□□□ -0.76
Vps50-203ENSMUST00000170873 Cngb1E1AZ71 1325 aa10.24□□□□□ -0.77
Vps50-203ENSMUST00000170873 Frmpd1A2AKB4 1549 aa10.23□□□□□ -0.77
Vps50-203ENSMUST00000170873 Cep162Q6ZQ06 1403 aa10.2□□□□□ -0.78
Vps50-203ENSMUST00000170873 NrkQ9R0G8 1455 aa10.19□□□□□ -0.78
Vps50-203ENSMUST00000170873 Ehmt2Q9Z148 1263 aaKnown RBP10.19□□□□□ -0.78
Vps50-203ENSMUST00000170873 Camsap1A2AHC3 1581 aa10.16□□□□□ -0.78
Vps50-203ENSMUST00000170873 Thoc2B1AZI6 1594 aaKnown RBP10.14□□□□□ -0.79
Vps50-203ENSMUST00000170873 Map3k1P53349 1493 aa10.14□□□□□ -0.79
Vps50-203ENSMUST00000170873 Erich3F6QRE9 1637 aa10.13□□□□□ -0.79
Vps50-203ENSMUST00000170873 Arhgap35Q91YM2 1499 aa10.1□□□□□ -0.79
Vps50-203ENSMUST00000170873 Pcgf6Q99NA9 353 aa10.09□□□□□ -0.79
Vps50-203ENSMUST00000170873 Ccdc18Q640L5 1455 aa10.08□□□□□ -0.8
Vps50-203ENSMUST00000170873 Shroom4Q1W617 1475 aa10.08□□□□□ -0.8
Vps50-203ENSMUST00000170873 Esf1Q3V1V3 845 aaKnown RBP10.08□□□□□ -0.8
Vps50-203ENSMUST00000170873 AqrQ8CFQ3 1481 aaKnown RBP10.06□□□□□ -0.8
Vps50-203ENSMUST00000170873 TchhA0A0B4J1F9 1599 aa10.05□□□□□ -0.8
Vps50-203ENSMUST00000170873 Ercc6F8VPZ5 1481 aa10.05□□□□□ -0.8
Vps50-203ENSMUST00000170873 NefmP08553 848 aa10.04□□□□□ -0.8
Vps50-203ENSMUST00000170873 Gab3Q8BSM5 595 aa10.03□□□□□ -0.8
Vps50-203ENSMUST00000170873 PtprkP35822 1457 aa10.03□□□□□ -0.8
Vps50-203ENSMUST00000170873 Ncapd3Q6ZQK0 1506 aa10.02□□□□□ -0.8
Vps50-203ENSMUST00000170873 Kdm5bQ80Y84 1544 aa10.02□□□□□ -0.8
Vps50-203ENSMUST00000170873 Grin2bQ01097 1482 aa10.02□□□□□ -0.81
Vps50-203ENSMUST00000170873 Fam135aQ6NS59 1506 aa10.02□□□□□ -0.81
Vps50-203ENSMUST00000170873 Arhgef5E9Q7D5 1581 aa10.02□□□□□ -0.81
Vps50-203ENSMUST00000170873 Lmo7E9PYF4 1699 aaKnown RBP10.01□□□□□ -0.81
Vps50-203ENSMUST00000170873 Peg3Q3URU2 1571 aa10□□□□□ -0.81
Vps50-203ENSMUST00000170873 Mier1Q5UAK0 511 aa9.98□□□□□ -0.81
Vps50-203ENSMUST00000170873 Gpatch8A2A6A1 1505 aa9.98□□□□□ -0.81
Vps50-203ENSMUST00000170873 Arap1Q4LDD4 1452 aa9.98□□□□□ -0.81
Vps50-203ENSMUST00000170873 Ankrd26Q811D2 1581 aa9.98□□□□□ -0.81
Vps50-203ENSMUST00000170873 Baz1bQ9Z277 1479 aa9.98□□□□□ -0.81
Vps50-203ENSMUST00000170873 Mroh2bQ7M6Y6 1581 aa9.98□□□□□ -0.81
Vps50-203ENSMUST00000170873 Tiam1Q60610 1591 aa9.97□□□□□ -0.81
Vps50-203ENSMUST00000170873 Kif21aQ9QXL2 1672 aa9.91□□□□□ -0.82
Vps50-203ENSMUST00000170873 Supt5hO55201 1082 aaKnown RBP9.9□□□□□ -0.82
Vps50-203ENSMUST00000170873 Pcf11G3X9Z4 1553 aa9.9□□□□□ -0.82
Vps50-203ENSMUST00000170873 Eea1Q8BL66 1411 aa9.9□□□□□ -0.83
Vps50-203ENSMUST00000170873 Kif15Q6P9L6 1387 aa9.89□□□□□ -0.83
Vps50-203ENSMUST00000170873 Phldb1Q6PDH0 1371 aaKnown RBP9.89□□□□□ -0.83
Vps50-203ENSMUST00000170873 Clip1Q922J3 1391 aa9.88□□□□□ -0.83
Vps50-203ENSMUST00000170873 Efcab5A0JP43 1406 aa9.87□□□□□ -0.83
Vps50-203ENSMUST00000170873 Slx4Q6P1D7 1565 aa9.87□□□□□ -0.83
Vps50-203ENSMUST00000170873 Urb2E9Q7L1 1524 aaKnown RBP9.84□□□□□ -0.83
Vps50-203ENSMUST00000170873 SynmQ70IV5 1561 aa9.84□□□□□ -0.83
Vps50-203ENSMUST00000170873 PogzQ8BZH4 1409 aaKnown RBP9.83□□□□□ -0.84
Vps50-203ENSMUST00000170873 Polr1aO35134 1717 aaKnown RBP9.83□□□□□ -0.84
Vps50-203ENSMUST00000170873 Samd9lQ69Z37 1561 aa9.83□□□□□ -0.84
Vps50-203ENSMUST00000170873 Naip1Q9QWK5 1403 aa9.82□□□□□ -0.84
Vps50-203ENSMUST00000170873 Cux1P53564 1515 aa9.81□□□□□ -0.84
Vps50-203ENSMUST00000170873 Abca5Q8K448 1642 aa9.79□□□□□ -0.84
Vps50-203ENSMUST00000170873 Fhod3Q76LL6 1578 aa9.79□□□□□ -0.84
Vps50-203ENSMUST00000170873 Duox2A2AQ99 1517 aa9.78□□□□□ -0.84
Retrieved 100 of 22,080 RNA–protein pairs in 68.5 ms