RNA–Protein interactions for RNA: ENSMUST00000170719.1

Sftpa1-202, Transcript of Pulmonary surfactant-associated protein A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sftpa1, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1-202ENSMUST00000170719 NischQ80TM9 1593 aa18.88■□□□□ 0.61
Sftpa1-202ENSMUST00000170719 Abcc9P70170 1546 aa18.25■□□□□ 0.51
Sftpa1-202ENSMUST00000170719 Gm35339A0A140LHH9 1649 aa18.24■□□□□ 0.51
Sftpa1-202ENSMUST00000170719 Rhox8Q6VSS7 320 aa18.01■□□□□ 0.47
Sftpa1-202ENSMUST00000170719 Abcc8B2RUS7 1588 aa17.85■□□□□ 0.45
Sftpa1-202ENSMUST00000170719 Rtl1Q7M732 1744 aa17.25■□□□□ 0.35
Sftpa1-202ENSMUST00000170719 Ccdc180J3QNE4 1664 aa17.09■□□□□ 0.33
Sftpa1-202ENSMUST00000170719 Zcchc6Q5BLK4 1491 aaKnown RBP16.78■□□□□ 0.28
Sftpa1-202ENSMUST00000170719 Ccdc136Q3TVA9 1136 aa16.71■□□□□ 0.27
Sftpa1-202ENSMUST00000170719 ScribQ80U72 1612 aa16.59■□□□□ 0.25
Sftpa1-202ENSMUST00000170719 Ehmt2Q9Z148 1263 aaKnown RBP16.58■□□□□ 0.24
Sftpa1-202ENSMUST00000170719 Rb1cc1Q9ESK9 1588 aa16.55■□□□□ 0.24
Sftpa1-202ENSMUST00000170719 Dcaf1Q80TR8 1506 aa16.5■□□□□ 0.23
Sftpa1-202ENSMUST00000170719 Rpgrip1Q9EPQ2 1331 aa16.43■□□□□ 0.22
Sftpa1-202ENSMUST00000170719 HrcG5E8J6 738 aa16.4■□□□□ 0.22
Sftpa1-202ENSMUST00000170719 Kdm5dQ62240 1548 aa16.35■□□□□ 0.21
Sftpa1-202ENSMUST00000170719 Baz1aO88379 1555 aa16.31■□□□□ 0.2
Sftpa1-202ENSMUST00000170719 Acin1Q9JIX8 1338 aaKnown RBP16.3■□□□□ 0.2
Sftpa1-202ENSMUST00000170719 Trim41Q5NCC3 630 aa16.27■□□□□ 0.19
Sftpa1-202ENSMUST00000170719 NacadQ5SWP3 1504 aa16.15■□□□□ 0.18
Sftpa1-202ENSMUST00000170719 Cngb1E1AZ71 1325 aa15.94■□□□□ 0.14
Sftpa1-202ENSMUST00000170719 Smarca2Q6DIC0 1577 aa15.93■□□□□ 0.14
Sftpa1-202ENSMUST00000170719 Gab3Q8BSM5 595 aa15.89■□□□□ 0.13
Sftpa1-202ENSMUST00000170719 Cep164Q5DU05 1446 aa15.86■□□□□ 0.13
Sftpa1-202ENSMUST00000170719 Crybg2B7ZCC2 1516 aa15.85■□□□□ 0.13
Sftpa1-202ENSMUST00000170719 Chic1Q8CBW7 227 aa15.84■□□□□ 0.13
Sftpa1-202ENSMUST00000170719 Sycp2Q9CUU3 1500 aa15.8■□□□□ 0.12
Sftpa1-202ENSMUST00000170719 Pcgf6Q99NA9 353 aa15.77■□□□□ 0.12
Sftpa1-202ENSMUST00000170719 Rsf1E9PWW9 1441 aaKnown RBP15.73■□□□□ 0.11
Sftpa1-202ENSMUST00000170719 Cecr2E9Q2Z1 1453 aa15.7■□□□□ 0.1
Sftpa1-202ENSMUST00000170719 Brd4Q9ESU6 1400 aaKnown RBP15.65■□□□□ 0.1
Sftpa1-202ENSMUST00000170719 Esf1Q3V1V3 845 aaKnown RBP15.64■□□□□ 0.09
Sftpa1-202ENSMUST00000170719 Ccdc88bQ4QRL3 1481 aa15.62■□□□□ 0.09
Sftpa1-202ENSMUST00000170719 Supt5hO55201 1082 aaKnown RBP15.57■□□□□ 0.08
Sftpa1-202ENSMUST00000170719 Golga3P55937 1487 aa15.54■□□□□ 0.08
Sftpa1-202ENSMUST00000170719 Synj1Q8CHC4 1574 aa15.53■□□□□ 0.08
Sftpa1-202ENSMUST00000170719 Zeb1Q64318 1117 aa15.48■□□□□ 0.07
Sftpa1-202ENSMUST00000170719 BicraF8VPZ9 1578 aa15.46■□□□□ 0.07
Sftpa1-202ENSMUST00000170719 Mier1Q5UAK0 511 aa15.43■□□□□ 0.06
Sftpa1-202ENSMUST00000170719 CftrP26361 1476 aa15.4■□□□□ 0.06
Sftpa1-202ENSMUST00000170719 UbtfP25976 765 aaKnown RBP15.29■□□□□ 0.04
Sftpa1-202ENSMUST00000170719 NefmP08553 848 aa15.28■□□□□ 0.04
Sftpa1-202ENSMUST00000170719 Myt1lP97500 1187 aa15.27■□□□□ 0.03
Sftpa1-202ENSMUST00000170719 Top2bQ64511 1612 aa15.23■□□□□ 0.03
Sftpa1-202ENSMUST00000170719 Cttnbp2B9EJA2 1648 aa15.21■□□□□ 0.03
Sftpa1-202ENSMUST00000170719 Cc2d2aQ8CFW7 1633 aa15.21■□□□□ 0.02
Sftpa1-202ENSMUST00000170719 Sall2Q9QX96 1004 aa15.15■□□□□ 0.02
Sftpa1-202ENSMUST00000170719 Smarca4Q3TKT4 1613 aaKnown RBP15.15■□□□□ 0.02
Sftpa1-202ENSMUST00000170719 Neurod1Q60867 357 aa15.14■□□□□ 0.01
Sftpa1-202ENSMUST00000170719 Npm2Q80W85 207 aa15.14■□□□□ 0.01
Sftpa1-202ENSMUST00000170719 Rapgef2Q8CHG7 1496 aa15.08■□□□□ 0
Sftpa1-202ENSMUST00000170719 Fmn1Q05860 1466 aa15.06■□□□□ 0
Sftpa1-202ENSMUST00000170719 Wdr66E9Q743 1299 aa15.05■□□□□ -0
Sftpa1-202ENSMUST00000170719 Cep162Q6ZQ06 1403 aa15.03■□□□□ -0
Sftpa1-202ENSMUST00000170719 Ppargc1bQ8VHJ7 1014 aa15.01□□□□□ -0.01
Sftpa1-202ENSMUST00000170719 Plekhg3Q4VAC9 1341 aa15.01□□□□□ -0.01
Sftpa1-202ENSMUST00000170719 Top2aQ01320 1528 aaKnown RBP15□□□□□ -0.01
Sftpa1-202ENSMUST00000170719 Aebp2Q9Z248 504 aaKnown RBP14.99□□□□□ -0.01
Sftpa1-202ENSMUST00000170719 Las1lA2BE28 776 aaKnown RBP14.99□□□□□ -0.01
Sftpa1-202ENSMUST00000170719 Iqgap2Q3UQ44 1575 aa14.96□□□□□ -0.01
Sftpa1-202ENSMUST00000170719 Il27Q8K3I6 234 aa14.94□□□□□ -0.02
Sftpa1-202ENSMUST00000170719 Clip1Q922J3 1391 aa14.92□□□□□ -0.02
Sftpa1-202ENSMUST00000170719 Ap3b1Q9Z1T1 1105 aa14.88□□□□□ -0.03
Sftpa1-202ENSMUST00000170719 Atad2bE9Q166 1460 aaKnown RBP14.83□□□□□ -0.04
Sftpa1-202ENSMUST00000170719 TonslQ6NZL6 1363 aa14.81□□□□□ -0.04
Sftpa1-202ENSMUST00000170719 ClspnQ80YR7 1315 aa14.76□□□□□ -0.05
Sftpa1-202ENSMUST00000170719 PtprkP35822 1457 aa14.76□□□□□ -0.05
Sftpa1-202ENSMUST00000170719 Pds5bQ4VA53 1446 aaKnown RBP14.73□□□□□ -0.05
Sftpa1-202ENSMUST00000170719 Eid3Q3V124 375 aa14.72□□□□□ -0.05
Sftpa1-202ENSMUST00000170719 Arhgap35Q91YM2 1499 aa14.72□□□□□ -0.05
Sftpa1-202ENSMUST00000170719 Nop58Q6DFW4 536 aaKnown RBP14.71□□□□□ -0.05
Sftpa1-202ENSMUST00000170719 Kif15Q6P9L6 1387 aa14.71□□□□□ -0.06
Sftpa1-202ENSMUST00000170719 Eif4g1Q6NZJ6 1600 aaKnown RBP14.7□□□□□ -0.06
Sftpa1-202ENSMUST00000170719 Cdk11bP24788 784 aaKnown RBP14.69□□□□□ -0.06
Sftpa1-202ENSMUST00000170719 Anks4bQ8K3X6 423 aa14.69□□□□□ -0.06
Sftpa1-202ENSMUST00000170719 Frmpd1A2AKB4 1549 aa14.69□□□□□ -0.06
Sftpa1-202ENSMUST00000170719 Csrnp3P59055 597 aa14.68□□□□□ -0.06
Sftpa1-202ENSMUST00000170719 Ncapd3Q6ZQK0 1506 aa14.66□□□□□ -0.06
Sftpa1-202ENSMUST00000170719 TnnQ80Z71 1560 aa14.66□□□□□ -0.06
Sftpa1-202ENSMUST00000170719 Setd5Q5XJV7 1441 aa14.65□□□□□ -0.06
Sftpa1-202ENSMUST00000170719 Eea1Q8BL66 1411 aa14.65□□□□□ -0.06
Sftpa1-202ENSMUST00000170719 Arap1Q4LDD4 1452 aa14.64□□□□□ -0.07
Sftpa1-202ENSMUST00000170719 Wdr62Q3U3T8 1523 aa14.6□□□□□ -0.07
Sftpa1-202ENSMUST00000170719 NrkQ9R0G8 1455 aa14.59□□□□□ -0.07
Sftpa1-202ENSMUST00000170719 Lmod2Q3UHZ5 550 aa14.56□□□□□ -0.08
Sftpa1-202ENSMUST00000170719 1700123L14RikQ3V2K7 440 aa14.56□□□□□ -0.08
Sftpa1-202ENSMUST00000170719 Lamc3Q9R0B6 1581 aa14.55□□□□□ -0.08
Sftpa1-202ENSMUST00000170719 Shroom4Q1W617 1475 aa14.55□□□□□ -0.08
Sftpa1-202ENSMUST00000170719 Fam50aQ9WV03 339 aaKnown RBP14.54□□□□□ -0.08
Sftpa1-202ENSMUST00000170719 BlmO88700 1416 aa14.53□□□□□ -0.08
Sftpa1-202ENSMUST00000170719 Arhgef5E9Q7D5 1581 aa14.53□□□□□ -0.08
Sftpa1-202ENSMUST00000170719 Ercc6F8VPZ5 1481 aa14.53□□□□□ -0.08
Sftpa1-202ENSMUST00000170719 Camsap1A2AHC3 1581 aa14.51□□□□□ -0.09
Sftpa1-202ENSMUST00000170719 Mapk8ip2Q9ERE9 830 aa14.5□□□□□ -0.09
Sftpa1-202ENSMUST00000170719 Ccdc18Q640L5 1455 aa14.48□□□□□ -0.09
Sftpa1-202ENSMUST00000170719 Baz1bQ9Z277 1479 aa14.48□□□□□ -0.09
Sftpa1-202ENSMUST00000170719 AqrQ8CFQ3 1481 aaKnown RBP14.48□□□□□ -0.09
Sftpa1-202ENSMUST00000170719 Gm38655A0A286YDK6 273 aa14.46□□□□□ -0.09
Sftpa1-202ENSMUST00000170719 Grin2bQ01097 1482 aa14.46□□□□□ -0.09
Sftpa1-202ENSMUST00000170719 Npm1Q61937 292 aaKnown RBP14.45□□□□□ -0.1
Retrieved 100 of 22,080 RNA–protein pairs in 79.1 ms