RNA–Protein interactions for RNA: ENSMUST00000167409.1

Trav9d-4-201, Transcript of T cell receptor alpha variable 9D-4 (Fragment), mousemouse

APPRIS ALT2 BASIC

Gene Trav9d-4, Length 307 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4-201ENSMUST00000167409 Gm35339A0A140LHH9 1649 aa18.72■□□□□ 0.59
Trav9d-4-201ENSMUST00000167409 NischQ80TM9 1593 aa18.28■□□□□ 0.52
Trav9d-4-201ENSMUST00000167409 Abcc9P70170 1546 aa17.75■□□□□ 0.43
Trav9d-4-201ENSMUST00000167409 Abcc8B2RUS7 1588 aa17.74■□□□□ 0.43
Trav9d-4-201ENSMUST00000167409 ScribQ80U72 1612 aa17.38■□□□□ 0.37
Trav9d-4-201ENSMUST00000167409 NacadQ5SWP3 1504 aa16.72■□□□□ 0.27
Trav9d-4-201ENSMUST00000167409 Kdm5dQ62240 1548 aa16.72■□□□□ 0.27
Trav9d-4-201ENSMUST00000167409 Sycp2Q9CUU3 1500 aa16.41■□□□□ 0.22
Trav9d-4-201ENSMUST00000167409 Dcaf1Q80TR8 1506 aa16.29■□□□□ 0.2
Trav9d-4-201ENSMUST00000167409 BicraF8VPZ9 1578 aa16.26■□□□□ 0.19
Trav9d-4-201ENSMUST00000167409 Dnajc5bQ9CQ94 199 aa16.18■□□□□ 0.18
Trav9d-4-201ENSMUST00000167409 Rb1cc1Q9ESK9 1588 aa15.96■□□□□ 0.15
Trav9d-4-201ENSMUST00000167409 Thoc2B1AZI6 1594 aaKnown RBP15.92■□□□□ 0.14
Trav9d-4-201ENSMUST00000167409 Pds5bQ4VA53 1446 aaKnown RBP15.85■□□□□ 0.13
Trav9d-4-201ENSMUST00000167409 Baz1aO88379 1555 aa15.67■□□□□ 0.1
Trav9d-4-201ENSMUST00000167409 Ccdc180J3QNE4 1664 aa15.64■□□□□ 0.09
Trav9d-4-201ENSMUST00000167409 Cc2d2aQ8CFW7 1633 aa15.64■□□□□ 0.09
Trav9d-4-201ENSMUST00000167409 Atad2bE9Q166 1460 aaKnown RBP15.62■□□□□ 0.09
Trav9d-4-201ENSMUST00000167409 Ercc6F8VPZ5 1481 aa15.59■□□□□ 0.09
Trav9d-4-201ENSMUST00000167409 Crybg2B7ZCC2 1516 aa15.55■□□□□ 0.08
Trav9d-4-201ENSMUST00000167409 Zcchc6Q5BLK4 1491 aaKnown RBP15.51■□□□□ 0.07
Trav9d-4-201ENSMUST00000167409 Fam135aQ6NS59 1506 aa15.48■□□□□ 0.07
Trav9d-4-201ENSMUST00000167409 Smarca2Q6DIC0 1577 aa15.45■□□□□ 0.06
Trav9d-4-201ENSMUST00000167409 Smarca4Q3TKT4 1613 aaKnown RBP15.43■□□□□ 0.06
Trav9d-4-201ENSMUST00000167409 Rhox8Q6VSS7 320 aa15.41■□□□□ 0.06
Trav9d-4-201ENSMUST00000167409 Iqgap2Q3UQ44 1575 aa15.41■□□□□ 0.06
Trav9d-4-201ENSMUST00000167409 Wdr62Q3U3T8 1523 aa15.31■□□□□ 0.04
Trav9d-4-201ENSMUST00000167409 Baz1bQ9Z277 1479 aa15.27■□□□□ 0.03
Trav9d-4-201ENSMUST00000167409 Frmpd1A2AKB4 1549 aa15.23■□□□□ 0.03
Trav9d-4-201ENSMUST00000167409 Cecr2E9Q2Z1 1453 aa15.2■□□□□ 0.02
Trav9d-4-201ENSMUST00000167409 Phldb1Q6PDH0 1371 aaKnown RBP15.2■□□□□ 0.02
Trav9d-4-201ENSMUST00000167409 Unc13aQ4KUS2 1712 aa15.12■□□□□ 0.01
Trav9d-4-201ENSMUST00000167409 Mrc2Q64449 1479 aa15.1■□□□□ 0.01
Trav9d-4-201ENSMUST00000167409 Ubl4bQ9CQ84 188 aa15.03■□□□□ -0
Trav9d-4-201ENSMUST00000167409 Dnajc5P60904 198 aa14.99□□□□□ -0.01
Trav9d-4-201ENSMUST00000167409 Trim41Q5NCC3 630 aa14.94□□□□□ -0.02
Trav9d-4-201ENSMUST00000167409 Cttnbp2B9EJA2 1648 aa14.91□□□□□ -0.02
Trav9d-4-201ENSMUST00000167409 Lrriq1Q0P5X1 1673 aa14.84□□□□□ -0.03
Trav9d-4-201ENSMUST00000167409 CftrP26361 1476 aa14.82□□□□□ -0.04
Trav9d-4-201ENSMUST00000167409 Synj1Q8CHC4 1574 aa14.8□□□□□ -0.04
Trav9d-4-201ENSMUST00000167409 Rtl1Q7M732 1744 aa14.78□□□□□ -0.04
Trav9d-4-201ENSMUST00000167409 Rsf1E9PWW9 1441 aaKnown RBP14.72□□□□□ -0.05
Trav9d-4-201ENSMUST00000167409 Kif21aQ9QXL2 1672 aa14.71□□□□□ -0.05
Trav9d-4-201ENSMUST00000167409 Brd4Q9ESU6 1400 aaKnown RBP14.69□□□□□ -0.06
Trav9d-4-201ENSMUST00000167409 Cux2P70298 1426 aa14.65□□□□□ -0.06
Trav9d-4-201ENSMUST00000167409 Eif4g3Q80XI3 1579 aaKnown RBP14.64□□□□□ -0.07
Trav9d-4-201ENSMUST00000167409 Kif15Q6P9L6 1387 aa14.59□□□□□ -0.07
Trav9d-4-201ENSMUST00000167409 Shroom2A2ALU4 1481 aa14.58□□□□□ -0.08
Trav9d-4-201ENSMUST00000167409 Esf1Q3V1V3 845 aaKnown RBP14.5□□□□□ -0.09
Trav9d-4-201ENSMUST00000167409 Lamc3Q9R0B6 1581 aa14.49□□□□□ -0.09
Trav9d-4-201ENSMUST00000167409 Ccdc136Q3TVA9 1136 aa14.43□□□□□ -0.1
Trav9d-4-201ENSMUST00000167409 Col17a1Q07563 1470 aa14.42□□□□□ -0.1
Trav9d-4-201ENSMUST00000167409 Npm1Q61937 292 aaKnown RBP14.41□□□□□ -0.1
Trav9d-4-201ENSMUST00000167409 Top2bQ64511 1612 aa14.41□□□□□ -0.1
Trav9d-4-201ENSMUST00000167409 Cep164Q5DU05 1446 aa14.41□□□□□ -0.1
Trav9d-4-201ENSMUST00000167409 Urb2E9Q7L1 1524 aaKnown RBP14.39□□□□□ -0.11
Trav9d-4-201ENSMUST00000167409 Plb1Q3TTY0 1478 aa14.33□□□□□ -0.12
Trav9d-4-201ENSMUST00000167409 Crocc2F6XLV1 1638 aa14.33□□□□□ -0.12
Trav9d-4-201ENSMUST00000167409 Dhx29Q6PGC1 1365 aaKnown RBP14.31□□□□□ -0.12
Trav9d-4-201ENSMUST00000167409 Rusc2Q80U22 1514 aa14.3□□□□□ -0.12
Trav9d-4-201ENSMUST00000167409 Ccdc18Q640L5 1455 aa14.29□□□□□ -0.12
Trav9d-4-201ENSMUST00000167409 Pabpn1Q8CCS6 302 aaKnown RBP14.28□□□□□ -0.12
Trav9d-4-201ENSMUST00000167409 TnnQ80Z71 1560 aa14.26□□□□□ -0.13
Trav9d-4-201ENSMUST00000167409 Zcchc11B2RX14 1644 aaKnown RBP14.25□□□□□ -0.13
Trav9d-4-201ENSMUST00000167409 Pelp1Q9DBD5 1123 aaKnown RBP14.24□□□□□ -0.13
Trav9d-4-201ENSMUST00000167409 Camsap1A2AHC3 1581 aa14.24□□□□□ -0.13
Trav9d-4-201ENSMUST00000167409 Ift140E9PY46 1464 aa14.21□□□□□ -0.13
Trav9d-4-201ENSMUST00000167409 Il27Q8K3I6 234 aa14.21□□□□□ -0.13
Trav9d-4-201ENSMUST00000167409 LrpprcQ6PB66 1392 aaKnown RBP14.21□□□□□ -0.14
Trav9d-4-201ENSMUST00000167409 PogzQ8BZH4 1409 aaKnown RBP14.12□□□□□ -0.15
Trav9d-4-201ENSMUST00000167409 Arhgef5E9Q7D5 1581 aa14.08□□□□□ -0.16
Trav9d-4-201ENSMUST00000167409 Pbrm1Q8BSQ9 1634 aaKnown RBP14.08□□□□□ -0.16
Trav9d-4-201ENSMUST00000167409 Golga3P55937 1487 aa14.05□□□□□ -0.16
Trav9d-4-201ENSMUST00000167409 Duox2A2AQ99 1517 aa14.05□□□□□ -0.16
Trav9d-4-201ENSMUST00000167409 Setd1bQ8CFT2 1985 aa14.02□□□□□ -0.16
Trav9d-4-201ENSMUST00000167409 Samd9lQ69Z37 1561 aa14.02□□□□□ -0.16
Trav9d-4-201ENSMUST00000167409 Adgrl3Q80TS3 1537 aa14.02□□□□□ -0.16
Trav9d-4-201ENSMUST00000167409 Disp1Q3TDN0 1521 aa14□□□□□ -0.17
Trav9d-4-201ENSMUST00000167409 Cngb1E1AZ71 1325 aa13.99□□□□□ -0.17
Trav9d-4-201ENSMUST00000167409 Cep170Q6A065 1588 aa13.99□□□□□ -0.17
Trav9d-4-201ENSMUST00000167409 Fmn1Q05860 1466 aa13.99□□□□□ -0.17
Trav9d-4-201ENSMUST00000167409 Nup160Q9Z0W3 1402 aaKnown RBP13.98□□□□□ -0.17
Trav9d-4-201ENSMUST00000167409 Cc2d2bA0A286YDU8 1405 aa13.98□□□□□ -0.17
Trav9d-4-201ENSMUST00000167409 Ttbk1Q6PCN3 1308 aa13.97□□□□□ -0.17
Trav9d-4-201ENSMUST00000167409 Grin2bQ01097 1482 aa13.96□□□□□ -0.17
Trav9d-4-201ENSMUST00000167409 Pcdh10E9PXQ7 1057 aa13.95□□□□□ -0.18
Trav9d-4-201ENSMUST00000167409 PtprkP35822 1457 aa13.94□□□□□ -0.18
Trav9d-4-201ENSMUST00000167409 Gapvd1Q6PAR5 1458 aa13.93□□□□□ -0.18
Trav9d-4-201ENSMUST00000167409 AqrQ8CFQ3 1481 aaKnown RBP13.91□□□□□ -0.18
Trav9d-4-201ENSMUST00000167409 Grin2aP35436 1464 aa13.88□□□□□ -0.19
Trav9d-4-201ENSMUST00000167409 PtprtQ99M80 1454 aa13.88□□□□□ -0.19
Trav9d-4-201ENSMUST00000167409 Fgd6Q69ZL1 1399 aa13.87□□□□□ -0.19
Trav9d-4-201ENSMUST00000167409 Rad54l2Q99NG0 1466 aa13.85□□□□□ -0.19
Trav9d-4-201ENSMUST00000167409 Magi3Q9EQJ9 1476 aa13.85□□□□□ -0.19
Trav9d-4-201ENSMUST00000167409 AknaQ80VW7 1404 aa13.83□□□□□ -0.2
Trav9d-4-201ENSMUST00000167409 Gm156Q58A37 223 aa13.82□□□□□ -0.2
Trav9d-4-201ENSMUST00000167409 Pprc1Q6NZN1 1644 aa13.82□□□□□ -0.2
Trav9d-4-201ENSMUST00000167409 Efcab5A0JP43 1406 aa13.81□□□□□ -0.2
Trav9d-4-201ENSMUST00000167409 Abcc1O35379 1528 aa13.81□□□□□ -0.2
Trav9d-4-201ENSMUST00000167409 Chd1P40201 1711 aa13.8□□□□□ -0.2
Retrieved 100 of 22,080 RNA–protein pairs in 157.8 ms