RNA–Protein interactions for RNA: ENSMUST00000166411.7

Ssb-206, Transcript of Lupus La protein homolog, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ssb, Length 2,088 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssb-206ENSMUST00000166411 NischQ80TM9 1593 aa20.51■□□□□ 0.87
Ssb-206ENSMUST00000166411 Gm35339A0A140LHH9 1649 aa20.27■□□□□ 0.84
Ssb-206ENSMUST00000166411 Abcc9P70170 1546 aa19.92■□□□□ 0.78
Ssb-206ENSMUST00000166411 Abcc8B2RUS7 1588 aa19.55■□□□□ 0.72
Ssb-206ENSMUST00000166411 Rhox8Q6VSS7 320 aa18.76■□□□□ 0.59
Ssb-206ENSMUST00000166411 ScribQ80U72 1612 aa18.38■□□□□ 0.53
Ssb-206ENSMUST00000166411 Rtl1Q7M732 1744 aa18.25■□□□□ 0.51
Ssb-206ENSMUST00000166411 Dcaf1Q80TR8 1506 aa18.14■□□□□ 0.49
Ssb-206ENSMUST00000166411 Rb1cc1Q9ESK9 1588 aa17.96■□□□□ 0.47
Ssb-206ENSMUST00000166411 Kdm5dQ62240 1548 aa17.95■□□□□ 0.46
Ssb-206ENSMUST00000166411 Ccdc180J3QNE4 1664 aa17.89■□□□□ 0.45
Ssb-206ENSMUST00000166411 Zcchc6Q5BLK4 1491 aaKnown RBP17.8■□□□□ 0.44
Ssb-206ENSMUST00000166411 NacadQ5SWP3 1504 aa17.79■□□□□ 0.44
Ssb-206ENSMUST00000166411 Baz1aO88379 1555 aa17.73■□□□□ 0.43
Ssb-206ENSMUST00000166411 Ccdc136Q3TVA9 1136 aa17.48■□□□□ 0.39
Ssb-206ENSMUST00000166411 Sycp2Q9CUU3 1500 aa17.43■□□□□ 0.38
Ssb-206ENSMUST00000166411 Crybg2B7ZCC2 1516 aa17.41■□□□□ 0.38
Ssb-206ENSMUST00000166411 Smarca2Q6DIC0 1577 aa17.34■□□□□ 0.37
Ssb-206ENSMUST00000166411 BicraF8VPZ9 1578 aa17.13■□□□□ 0.33
Ssb-206ENSMUST00000166411 HrcG5E8J6 738 aa17.09■□□□□ 0.33
Ssb-206ENSMUST00000166411 Trim41Q5NCC3 630 aa17.03■□□□□ 0.32
Ssb-206ENSMUST00000166411 Cecr2E9Q2Z1 1453 aa17.02■□□□□ 0.31
Ssb-206ENSMUST00000166411 Brd4Q9ESU6 1400 aaKnown RBP16.85■□□□□ 0.29
Ssb-206ENSMUST00000166411 Synj1Q8CHC4 1574 aa16.81■□□□□ 0.28
Ssb-206ENSMUST00000166411 CftrP26361 1476 aa16.71■□□□□ 0.27
Ssb-206ENSMUST00000166411 Cep164Q5DU05 1446 aa16.69■□□□□ 0.26
Ssb-206ENSMUST00000166411 Cngb1E1AZ71 1325 aa16.69■□□□□ 0.26
Ssb-206ENSMUST00000166411 Rsf1E9PWW9 1441 aaKnown RBP16.65■□□□□ 0.26
Ssb-206ENSMUST00000166411 Golga3P55937 1487 aa16.64■□□□□ 0.25
Ssb-206ENSMUST00000166411 Chic1Q8CBW7 227 aa16.63■□□□□ 0.25
Ssb-206ENSMUST00000166411 Smarca4Q3TKT4 1613 aaKnown RBP16.62■□□□□ 0.25
Ssb-206ENSMUST00000166411 Ehmt2Q9Z148 1263 aaKnown RBP16.6■□□□□ 0.25
Ssb-206ENSMUST00000166411 Cttnbp2B9EJA2 1648 aa16.6■□□□□ 0.25
Ssb-206ENSMUST00000166411 Ccdc88bQ4QRL3 1481 aa16.58■□□□□ 0.24
Ssb-206ENSMUST00000166411 Esf1Q3V1V3 845 aaKnown RBP16.52■□□□□ 0.23
Ssb-206ENSMUST00000166411 Top2bQ64511 1612 aa16.51■□□□□ 0.23
Ssb-206ENSMUST00000166411 Iqgap2Q3UQ44 1575 aa16.43■□□□□ 0.22
Ssb-206ENSMUST00000166411 Gab3Q8BSM5 595 aa16.41■□□□□ 0.22
Ssb-206ENSMUST00000166411 Cc2d2aQ8CFW7 1633 aa16.39■□□□□ 0.21
Ssb-206ENSMUST00000166411 Acin1Q9JIX8 1338 aaKnown RBP16.38■□□□□ 0.21
Ssb-206ENSMUST00000166411 Atad2bE9Q166 1460 aaKnown RBP16.36■□□□□ 0.21
Ssb-206ENSMUST00000166411 Rpgrip1Q9EPQ2 1331 aa16.35■□□□□ 0.21
Ssb-206ENSMUST00000166411 Pds5bQ4VA53 1446 aaKnown RBP16.3■□□□□ 0.2
Ssb-206ENSMUST00000166411 Fmn1Q05860 1466 aa16.22■□□□□ 0.19
Ssb-206ENSMUST00000166411 Frmpd1A2AKB4 1549 aa16.16■□□□□ 0.18
Ssb-206ENSMUST00000166411 Top2aQ01320 1528 aaKnown RBP16.16■□□□□ 0.18
Ssb-206ENSMUST00000166411 Wdr62Q3U3T8 1523 aa16.14■□□□□ 0.17
Ssb-206ENSMUST00000166411 Rapgef2Q8CHG7 1496 aa16.07■□□□□ 0.16
Ssb-206ENSMUST00000166411 TnnQ80Z71 1560 aa16.05■□□□□ 0.16
Ssb-206ENSMUST00000166411 Unc13aQ4KUS2 1712 aa16.01■□□□□ 0.15
Ssb-206ENSMUST00000166411 Ercc6F8VPZ5 1481 aa15.99■□□□□ 0.15
Ssb-206ENSMUST00000166411 Lamc3Q9R0B6 1581 aa15.95■□□□□ 0.14
Ssb-206ENSMUST00000166411 Cep162Q6ZQ06 1403 aa15.94■□□□□ 0.14
Ssb-206ENSMUST00000166411 Kif15Q6P9L6 1387 aa15.9■□□□□ 0.14
Ssb-206ENSMUST00000166411 Thoc2B1AZI6 1594 aaKnown RBP15.87■□□□□ 0.13
Ssb-206ENSMUST00000166411 Eif4g1Q6NZJ6 1600 aaKnown RBP15.87■□□□□ 0.13
Ssb-206ENSMUST00000166411 Myt1lP97500 1187 aa15.85■□□□□ 0.13
Ssb-206ENSMUST00000166411 Npm2Q80W85 207 aa15.84■□□□□ 0.13
Ssb-206ENSMUST00000166411 PtprkP35822 1457 aa15.84■□□□□ 0.13
Ssb-206ENSMUST00000166411 Il27Q8K3I6 234 aa15.82■□□□□ 0.12
Ssb-206ENSMUST00000166411 Camsap1A2AHC3 1581 aa15.81■□□□□ 0.12
Ssb-206ENSMUST00000166411 Phldb1Q6PDH0 1371 aaKnown RBP15.77■□□□□ 0.12
Ssb-206ENSMUST00000166411 Mier1Q5UAK0 511 aa15.76■□□□□ 0.11
Ssb-206ENSMUST00000166411 Arhgap35Q91YM2 1499 aa15.75■□□□□ 0.11
Ssb-206ENSMUST00000166411 NrkQ9R0G8 1455 aa15.74■□□□□ 0.11
Ssb-206ENSMUST00000166411 Shroom4Q1W617 1475 aa15.7■□□□□ 0.1
Ssb-206ENSMUST00000166411 Grin2bQ01097 1482 aa15.68■□□□□ 0.1
Ssb-206ENSMUST00000166411 Ccdc18Q640L5 1455 aa15.68■□□□□ 0.1
Ssb-206ENSMUST00000166411 Ubl4bQ9CQ84 188 aa15.67■□□□□ 0.1
Ssb-206ENSMUST00000166411 UbtfP25976 765 aaKnown RBP15.67■□□□□ 0.1
Ssb-206ENSMUST00000166411 Cux2P70298 1426 aa15.67■□□□□ 0.1
Ssb-206ENSMUST00000166411 Fam135aQ6NS59 1506 aa15.66■□□□□ 0.1
Ssb-206ENSMUST00000166411 Clip1Q922J3 1391 aa15.65■□□□□ 0.1
Ssb-206ENSMUST00000166411 Plekhg3Q4VAC9 1341 aa15.58■□□□□ 0.08
Ssb-206ENSMUST00000166411 Map3k1P53349 1493 aa15.58■□□□□ 0.08
Ssb-206ENSMUST00000166411 Mroh2bQ7M6Y6 1581 aa15.56■□□□□ 0.08
Ssb-206ENSMUST00000166411 Pcgf6Q99NA9 353 aa15.56■□□□□ 0.08
Ssb-206ENSMUST00000166411 Arap1Q4LDD4 1452 aa15.56■□□□□ 0.08
Ssb-206ENSMUST00000166411 Baz1bQ9Z277 1479 aa15.54■□□□□ 0.08
Ssb-206ENSMUST00000166411 Npm1Q61937 292 aaKnown RBP15.54■□□□□ 0.08
Ssb-206ENSMUST00000166411 NefmP08553 848 aa15.53■□□□□ 0.08
Ssb-206ENSMUST00000166411 Eea1Q8BL66 1411 aa15.53■□□□□ 0.08
Ssb-206ENSMUST00000166411 LrpprcQ6PB66 1392 aaKnown RBP15.52■□□□□ 0.08
Ssb-206ENSMUST00000166411 Zeb1Q64318 1117 aa15.51■□□□□ 0.07
Ssb-206ENSMUST00000166411 PogzQ8BZH4 1409 aaKnown RBP15.49■□□□□ 0.07
Ssb-206ENSMUST00000166411 Setd5Q5XJV7 1441 aa15.48■□□□□ 0.07
Ssb-206ENSMUST00000166411 Duox2A2AQ99 1517 aa15.48■□□□□ 0.07
Ssb-206ENSMUST00000166411 Ap3b1Q9Z1T1 1105 aa15.48■□□□□ 0.07
Ssb-206ENSMUST00000166411 Efcab5A0JP43 1406 aa15.48■□□□□ 0.07
Ssb-206ENSMUST00000166411 Dnajc5bQ9CQ94 199 aa15.47■□□□□ 0.07
Ssb-206ENSMUST00000166411 Arhgef5E9Q7D5 1581 aa15.46■□□□□ 0.07
Ssb-206ENSMUST00000166411 Supt5hO55201 1082 aaKnown RBP15.46■□□□□ 0.07
Ssb-206ENSMUST00000166411 Ankrd26Q811D2 1581 aa15.44■□□□□ 0.06
Ssb-206ENSMUST00000166411 AqrQ8CFQ3 1481 aaKnown RBP15.43■□□□□ 0.06
Ssb-206ENSMUST00000166411 Samd9lQ69Z37 1561 aa15.42■□□□□ 0.06
Ssb-206ENSMUST00000166411 Erich3F6QRE9 1637 aa15.41■□□□□ 0.06
Ssb-206ENSMUST00000166411 Dhx29Q6PGC1 1365 aaKnown RBP15.4■□□□□ 0.06
Ssb-206ENSMUST00000166411 Ncapd3Q6ZQK0 1506 aa15.4■□□□□ 0.06
Ssb-206ENSMUST00000166411 Cux1P53564 1515 aa15.38■□□□□ 0.05
Ssb-206ENSMUST00000166411 Tiam1Q60610 1591 aa15.37■□□□□ 0.05
Retrieved 100 of 22,080 RNA–protein pairs in 148.7 ms