RNA–Protein interactions for RNA: ENSMUST00000164843.7

Capn1-202, Transcript of Calpain-1 catalytic subunit, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Capn1, Length 3,048 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1-202ENSMUST00000164843 Rpgrip1Q9EPQ2 1331 aa29.94■■■□□ 2.38
Capn1-202ENSMUST00000164843 Rtl1Q7M732 1744 aa28.97■■■□□ 2.23
Capn1-202ENSMUST00000164843 NischQ80TM9 1593 aa28.81■■■□□ 2.2
Capn1-202ENSMUST00000164843 Ccdc180J3QNE4 1664 aa28.72■■■□□ 2.19
Capn1-202ENSMUST00000164843 Acin1Q9JIX8 1338 aaKnown RBP28.69■■■□□ 2.18
Capn1-202ENSMUST00000164843 Pcgf6Q99NA9 353 aa28.3■■■□□ 2.12
Capn1-202ENSMUST00000164843 Rhox8Q6VSS7 320 aa28.11■■■□□ 2.09
Capn1-202ENSMUST00000164843 Abcc9P70170 1546 aa28.06■■■□□ 2.08
Capn1-202ENSMUST00000164843 Gm35339A0A140LHH9 1649 aa27.94■■■□□ 2.06
Capn1-202ENSMUST00000164843 Dcaf1Q80TR8 1506 aa27.61■■■□□ 2.01
Capn1-202ENSMUST00000164843 Ehmt2Q9Z148 1263 aaKnown RBP27.55■■■□□ 2
Capn1-202ENSMUST00000164843 Zcchc6Q5BLK4 1491 aaKnown RBP27.44■■□□□ 1.98
Capn1-202ENSMUST00000164843 Las1lA2BE28 776 aaKnown RBP27.43■■□□□ 1.98
Capn1-202ENSMUST00000164843 Trim41Q5NCC3 630 aa27.42■■□□□ 1.98
Capn1-202ENSMUST00000164843 Supt5hO55201 1082 aaKnown RBP27.33■■□□□ 1.97
Capn1-202ENSMUST00000164843 Neurod1Q60867 357 aa27.32■■□□□ 1.96
Capn1-202ENSMUST00000164843 HrcG5E8J6 738 aa27.15■■□□□ 1.94
Capn1-202ENSMUST00000164843 Myt1Q8CFC2 1127 aa27.03■■□□□ 1.92
Capn1-202ENSMUST00000164843 Abcc8B2RUS7 1588 aa26.98■■□□□ 1.91
Capn1-202ENSMUST00000164843 CenpbP27790 599 aa26.8■■□□□ 1.88
Capn1-202ENSMUST00000164843 1700123L14RikQ3V2K7 440 aa26.77■■□□□ 1.88
Capn1-202ENSMUST00000164843 Anks4bQ8K3X6 423 aa26.58■■□□□ 1.85
Capn1-202ENSMUST00000164843 Csrnp3P59055 597 aa26.43■■□□□ 1.82
Capn1-202ENSMUST00000164843 Zeb1Q64318 1117 aa26.33■■□□□ 1.81
Capn1-202ENSMUST00000164843 Cngb1E1AZ71 1325 aa26.32■■□□□ 1.8
Capn1-202ENSMUST00000164843 Aplp2Q06335 707 aa26.32■■□□□ 1.8
Capn1-202ENSMUST00000164843 DiexfQ8BTT6 772 aaKnown RBP26.31■■□□□ 1.8
Capn1-202ENSMUST00000164843 NefmP08553 848 aa26.25■■□□□ 1.79
Capn1-202ENSMUST00000164843 Sall2Q9QX96 1004 aa26.22■■□□□ 1.79
Capn1-202ENSMUST00000164843 ScribQ80U72 1612 aa26.01■■□□□ 1.75
Capn1-202ENSMUST00000164843 Cep164Q5DU05 1446 aa25.91■■□□□ 1.74
Capn1-202ENSMUST00000164843 Bcl11aQ9QYE3 773 aa25.9■■□□□ 1.74
Capn1-202ENSMUST00000164843 Ccdc136Q3TVA9 1136 aa25.86■■□□□ 1.73
Capn1-202ENSMUST00000164843 Cdk11bP24788 784 aaKnown RBP25.84■■□□□ 1.73
Capn1-202ENSMUST00000164843 Mier1Q5UAK0 511 aa25.74■■□□□ 1.71
Capn1-202ENSMUST00000164843 Nop58Q6DFW4 536 aaKnown RBP25.71■■□□□ 1.71
Capn1-202ENSMUST00000164843 Wdr66E9Q743 1299 aa25.54■■□□□ 1.68
Capn1-202ENSMUST00000164843 ClspnQ80YR7 1315 aa25.5■■□□□ 1.67
Capn1-202ENSMUST00000164843 Gm38655A0A286YDK6 273 aa25.5■■□□□ 1.67
Capn1-202ENSMUST00000164843 Aebp2Q9Z248 504 aaKnown RBP25.4■■□□□ 1.66
Capn1-202ENSMUST00000164843 Rb1cc1Q9ESK9 1588 aa25.36■■□□□ 1.65
Capn1-202ENSMUST00000164843 Fam71e1A1L3C1 212 aa25.32■■□□□ 1.64
Capn1-202ENSMUST00000164843 Kdm5dQ62240 1548 aa25.2■■□□□ 1.62
Capn1-202ENSMUST00000164843 PrkcshO08795 521 aa25.13■■□□□ 1.61
Capn1-202ENSMUST00000164843 Baz1aO88379 1555 aa25.12■■□□□ 1.61
Capn1-202ENSMUST00000164843 Tnnt3Q9QZ47 272 aa25.1■■□□□ 1.61
Capn1-202ENSMUST00000164843 NacadQ5SWP3 1504 aa25.09■■□□□ 1.61
Capn1-202ENSMUST00000164843 Gab3Q8BSM5 595 aa25.04■■□□□ 1.6
Capn1-202ENSMUST00000164843 Rsf1E9PWW9 1441 aaKnown RBP24.98■■□□□ 1.59
Capn1-202ENSMUST00000164843 Ppargc1bQ8VHJ7 1014 aa24.96■■□□□ 1.59
Capn1-202ENSMUST00000164843 Mapk8ip2Q9ERE9 830 aa24.95■■□□□ 1.58
Capn1-202ENSMUST00000164843 Rtl5Q5DTT4 599 aa24.94■■□□□ 1.58
Capn1-202ENSMUST00000164843 Hnrnpul2Q00PI9 745 aaKnown RBP24.91■■□□□ 1.58
Capn1-202ENSMUST00000164843 Chic1Q8CBW7 227 aa24.91■■□□□ 1.58
Capn1-202ENSMUST00000164843 SafbD3YXK2 937 aaKnown RBP24.9■■□□□ 1.58
Capn1-202ENSMUST00000164843 Ifnlr1Q8CGK5 535 aa24.88■■□□□ 1.57
Capn1-202ENSMUST00000164843 Amer1Q7TS75 1132 aa24.87■■□□□ 1.57
Capn1-202ENSMUST00000164843 TonslQ6NZL6 1363 aa24.85■■□□□ 1.57
Capn1-202ENSMUST00000164843 Anp32aO35381 247 aa24.82■■□□□ 1.56
Capn1-202ENSMUST00000164843 UbtfP25976 765 aaKnown RBP24.76■■□□□ 1.55
Capn1-202ENSMUST00000164843 Pelp1Q9DBD5 1123 aaKnown RBP24.69■■□□□ 1.54
Capn1-202ENSMUST00000164843 Smarca2Q6DIC0 1577 aa24.66■■□□□ 1.54
Capn1-202ENSMUST00000164843 Sycp2Q9CUU3 1500 aa24.63■■□□□ 1.53
Capn1-202ENSMUST00000164843 Ccdc88bQ4QRL3 1481 aa24.59■■□□□ 1.53
Capn1-202ENSMUST00000164843 Ap3b1Q9Z1T1 1105 aa24.42■■□□□ 1.5
Capn1-202ENSMUST00000164843 Stra8P70278 393 aa24.39■■□□□ 1.5
Capn1-202ENSMUST00000164843 Crybg2B7ZCC2 1516 aa24.37■■□□□ 1.49
Capn1-202ENSMUST00000164843 Golga3P55937 1487 aa24.37■■□□□ 1.49
Capn1-202ENSMUST00000164843 Hdac5Q9Z2V6 1113 aa24.37■■□□□ 1.49
Capn1-202ENSMUST00000164843 BicraF8VPZ9 1578 aa24.36■■□□□ 1.49
Capn1-202ENSMUST00000164843 Znf710Q3U288 666 aa24.35■■□□□ 1.49
Capn1-202ENSMUST00000164843 Nolc1E9Q5C9 702 aaKnown RBP24.34■■□□□ 1.49
Capn1-202ENSMUST00000164843 Supt16hQ920B9 1047 aa24.25■■□□□ 1.47
Capn1-202ENSMUST00000164843 Calr4Q3TQS0 420 aa24.24■■□□□ 1.47
Capn1-202ENSMUST00000164843 Brd4Q9ESU6 1400 aaKnown RBP24.2■■□□□ 1.47
Capn1-202ENSMUST00000164843 Ncapd3Q6ZQK0 1506 aa24.12■■□□□ 1.45
Capn1-202ENSMUST00000164843 Rapgef2Q8CHG7 1496 aa24.1■■□□□ 1.45
Capn1-202ENSMUST00000164843 Upf2A2AT37 1269 aaKnown RBP24.08■■□□□ 1.45
Capn1-202ENSMUST00000164843 Dnajc5bQ9CQ94 199 aa24.07■■□□□ 1.44
Capn1-202ENSMUST00000164843 Fgd1P52734 960 aa24.06■■□□□ 1.44
Capn1-202ENSMUST00000164843 Ccdc9Q8VC31 543 aaKnown RBP24.06■■□□□ 1.44
Capn1-202ENSMUST00000164843 Rpap1Q80TE0 1409 aa24.05■■□□□ 1.44
Capn1-202ENSMUST00000164843 Gtf3c3Q3TMP1 882 aa24■■□□□ 1.43
Capn1-202ENSMUST00000164843 Ccdc27Q3V036 639 aa24■■□□□ 1.43
Capn1-202ENSMUST00000164843 NrdcQ8BHG1 1161 aa23.97■■□□□ 1.43
Capn1-202ENSMUST00000164843 Ttbk1Q6PCN3 1308 aa23.97■■□□□ 1.43
Capn1-202ENSMUST00000164843 Wdr43Q6ZQL4 677 aaKnown RBP23.93■■□□□ 1.42
Capn1-202ENSMUST00000164843 Washc2Q6PGL7 1334 aa23.91■■□□□ 1.42
Capn1-202ENSMUST00000164843 Ppp4r2Q0VGB7 417 aa23.89■■□□□ 1.42
Capn1-202ENSMUST00000164843 Top2bQ64511 1612 aa23.87■■□□□ 1.41
Capn1-202ENSMUST00000164843 Cep162Q6ZQ06 1403 aa23.87■■□□□ 1.41
Capn1-202ENSMUST00000164843 Irx3P81067 507 aa23.85■■□□□ 1.41
Capn1-202ENSMUST00000164843 Pknox2Q8BG99 474 aa23.85■■□□□ 1.41
Capn1-202ENSMUST00000164843 Eid3Q3V124 375 aa23.81■■□□□ 1.4
Capn1-202ENSMUST00000164843 Plekhg3Q4VAC9 1341 aa23.8■■□□□ 1.4
Capn1-202ENSMUST00000164843 Myt1lP97500 1187 aa23.8■■□□□ 1.4
Capn1-202ENSMUST00000164843 Kdm5bQ80Y84 1544 aa23.79■■□□□ 1.4
Capn1-202ENSMUST00000164843 Clip1Q922J3 1391 aa23.79■■□□□ 1.4
Capn1-202ENSMUST00000164843 Synj1Q8CHC4 1574 aa23.79■■□□□ 1.4
Capn1-202ENSMUST00000164843 Il27Q8K3I6 234 aa23.79■■□□□ 1.4
Retrieved 100 of 22,080 RNA–protein pairs in 14.2 ms