RNA–Protein interactions for RNA: ENSMUST00000163559.7

Ccr9-202, Transcript of C-C chemokine receptor type 9, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccr9, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr9-202ENSMUST00000163559 NischQ80TM9 1593 aa29.19■■■□□ 2.26
Ccr9-202ENSMUST00000163559 Abcc9P70170 1546 aa28.19■■■□□ 2.1
Ccr9-202ENSMUST00000163559 Gm35339A0A140LHH9 1649 aa28.13■■■□□ 2.09
Ccr9-202ENSMUST00000163559 Rhox8Q6VSS7 320 aa27.94■■■□□ 2.06
Ccr9-202ENSMUST00000163559 Abcc8B2RUS7 1588 aa27.58■■■□□ 2.01
Ccr9-202ENSMUST00000163559 Rtl1Q7M732 1744 aa26.55■■□□□ 1.84
Ccr9-202ENSMUST00000163559 Ccdc180J3QNE4 1664 aa26.33■■□□□ 1.81
Ccr9-202ENSMUST00000163559 Ccdc136Q3TVA9 1136 aa25.95■■□□□ 1.74
Ccr9-202ENSMUST00000163559 Zcchc6Q5BLK4 1491 aaKnown RBP25.91■■□□□ 1.74
Ccr9-202ENSMUST00000163559 Ehmt2Q9Z148 1263 aaKnown RBP25.8■■□□□ 1.72
Ccr9-202ENSMUST00000163559 ScribQ80U72 1612 aa25.68■■□□□ 1.7
Ccr9-202ENSMUST00000163559 Rb1cc1Q9ESK9 1588 aa25.61■■□□□ 1.69
Ccr9-202ENSMUST00000163559 Dcaf1Q80TR8 1506 aa25.41■■□□□ 1.66
Ccr9-202ENSMUST00000163559 Kdm5dQ62240 1548 aa25.3■■□□□ 1.64
Ccr9-202ENSMUST00000163559 HrcG5E8J6 738 aa25.26■■□□□ 1.63
Ccr9-202ENSMUST00000163559 Rpgrip1Q9EPQ2 1331 aa25.26■■□□□ 1.63
Ccr9-202ENSMUST00000163559 Trim41Q5NCC3 630 aa25.19■■□□□ 1.62
Ccr9-202ENSMUST00000163559 Baz1aO88379 1555 aa25.19■■□□□ 1.62
Ccr9-202ENSMUST00000163559 Acin1Q9JIX8 1338 aaKnown RBP25.15■■□□□ 1.62
Ccr9-202ENSMUST00000163559 NacadQ5SWP3 1504 aa24.94■■□□□ 1.58
Ccr9-202ENSMUST00000163559 Cngb1E1AZ71 1325 aa24.74■■□□□ 1.55
Ccr9-202ENSMUST00000163559 Gab3Q8BSM5 595 aa24.68■■□□□ 1.54
Ccr9-202ENSMUST00000163559 Smarca2Q6DIC0 1577 aa24.61■■□□□ 1.53
Ccr9-202ENSMUST00000163559 Chic1Q8CBW7 227 aa24.55■■□□□ 1.52
Ccr9-202ENSMUST00000163559 Cep164Q5DU05 1446 aa24.49■■□□□ 1.51
Ccr9-202ENSMUST00000163559 Sycp2Q9CUU3 1500 aa24.41■■□□□ 1.5
Ccr9-202ENSMUST00000163559 Crybg2B7ZCC2 1516 aa24.39■■□□□ 1.49
Ccr9-202ENSMUST00000163559 Pcgf6Q99NA9 353 aa24.37■■□□□ 1.49
Ccr9-202ENSMUST00000163559 Rsf1E9PWW9 1441 aaKnown RBP24.34■■□□□ 1.49
Ccr9-202ENSMUST00000163559 Cecr2E9Q2Z1 1453 aa24.32■■□□□ 1.48
Ccr9-202ENSMUST00000163559 Esf1Q3V1V3 845 aaKnown RBP24.26■■□□□ 1.47
Ccr9-202ENSMUST00000163559 Ccdc88bQ4QRL3 1481 aa24.19■■□□□ 1.46
Ccr9-202ENSMUST00000163559 Brd4Q9ESU6 1400 aaKnown RBP24.17■■□□□ 1.46
Ccr9-202ENSMUST00000163559 Supt5hO55201 1082 aaKnown RBP24.1■■□□□ 1.45
Ccr9-202ENSMUST00000163559 Synj1Q8CHC4 1574 aa24.02■■□□□ 1.44
Ccr9-202ENSMUST00000163559 Zeb1Q64318 1117 aa24.01■■□□□ 1.43
Ccr9-202ENSMUST00000163559 Golga3P55937 1487 aa24.01■■□□□ 1.43
Ccr9-202ENSMUST00000163559 BicraF8VPZ9 1578 aa23.92■■□□□ 1.42
Ccr9-202ENSMUST00000163559 Mier1Q5UAK0 511 aa23.87■■□□□ 1.41
Ccr9-202ENSMUST00000163559 CftrP26361 1476 aa23.81■■□□□ 1.4
Ccr9-202ENSMUST00000163559 UbtfP25976 765 aaKnown RBP23.72■■□□□ 1.39
Ccr9-202ENSMUST00000163559 Myt1lP97500 1187 aa23.72■■□□□ 1.39
Ccr9-202ENSMUST00000163559 NefmP08553 848 aa23.56■■□□□ 1.36
Ccr9-202ENSMUST00000163559 Cc2d2aQ8CFW7 1633 aa23.54■■□□□ 1.36
Ccr9-202ENSMUST00000163559 Top2bQ64511 1612 aa23.51■■□□□ 1.35
Ccr9-202ENSMUST00000163559 Cttnbp2B9EJA2 1648 aa23.5■■□□□ 1.35
Ccr9-202ENSMUST00000163559 Npm2Q80W85 207 aa23.48■■□□□ 1.35
Ccr9-202ENSMUST00000163559 Sall2Q9QX96 1004 aa23.44■■□□□ 1.34
Ccr9-202ENSMUST00000163559 Neurod1Q60867 357 aa23.43■■□□□ 1.34
Ccr9-202ENSMUST00000163559 Smarca4Q3TKT4 1613 aaKnown RBP23.41■■□□□ 1.34
Ccr9-202ENSMUST00000163559 Ppargc1bQ8VHJ7 1014 aa23.36■■□□□ 1.33
Ccr9-202ENSMUST00000163559 Wdr66E9Q743 1299 aa23.33■■□□□ 1.33
Ccr9-202ENSMUST00000163559 Plekhg3Q4VAC9 1341 aa23.29■■□□□ 1.32
Ccr9-202ENSMUST00000163559 Rapgef2Q8CHG7 1496 aa23.28■■□□□ 1.32
Ccr9-202ENSMUST00000163559 Fmn1Q05860 1466 aa23.26■■□□□ 1.31
Ccr9-202ENSMUST00000163559 Cep162Q6ZQ06 1403 aa23.23■■□□□ 1.31
Ccr9-202ENSMUST00000163559 Il27Q8K3I6 234 aa23.22■■□□□ 1.31
Ccr9-202ENSMUST00000163559 Aebp2Q9Z248 504 aaKnown RBP23.22■■□□□ 1.31
Ccr9-202ENSMUST00000163559 Top2aQ01320 1528 aaKnown RBP23.17■■□□□ 1.3
Ccr9-202ENSMUST00000163559 Las1lA2BE28 776 aaKnown RBP23.16■■□□□ 1.3
Ccr9-202ENSMUST00000163559 Iqgap2Q3UQ44 1575 aa23.15■■□□□ 1.3
Ccr9-202ENSMUST00000163559 Ap3b1Q9Z1T1 1105 aa23.13■■□□□ 1.29
Ccr9-202ENSMUST00000163559 Clip1Q922J3 1391 aa23.08■■□□□ 1.29
Ccr9-202ENSMUST00000163559 Atad2bE9Q166 1460 aaKnown RBP22.92■■□□□ 1.26
Ccr9-202ENSMUST00000163559 TonslQ6NZL6 1363 aa22.89■■□□□ 1.26
Ccr9-202ENSMUST00000163559 Eid3Q3V124 375 aa22.87■■□□□ 1.25
Ccr9-202ENSMUST00000163559 PtprkP35822 1457 aa22.85■■□□□ 1.25
Ccr9-202ENSMUST00000163559 ClspnQ80YR7 1315 aa22.79■■□□□ 1.24
Ccr9-202ENSMUST00000163559 Kif15Q6P9L6 1387 aa22.79■■□□□ 1.24
Ccr9-202ENSMUST00000163559 Pds5bQ4VA53 1446 aaKnown RBP22.77■■□□□ 1.24
Ccr9-202ENSMUST00000163559 Arhgap35Q91YM2 1499 aa22.75■■□□□ 1.23
Ccr9-202ENSMUST00000163559 Nop58Q6DFW4 536 aaKnown RBP22.74■■□□□ 1.23
Ccr9-202ENSMUST00000163559 Frmpd1A2AKB4 1549 aa22.73■■□□□ 1.23
Ccr9-202ENSMUST00000163559 Csrnp3P59055 597 aa22.71■■□□□ 1.23
Ccr9-202ENSMUST00000163559 Cdk11bP24788 784 aaKnown RBP22.69■■□□□ 1.22
Ccr9-202ENSMUST00000163559 Eif4g1Q6NZJ6 1600 aaKnown RBP22.68■■□□□ 1.22
Ccr9-202ENSMUST00000163559 Setd5Q5XJV7 1441 aa22.68■■□□□ 1.22
Ccr9-202ENSMUST00000163559 Arap1Q4LDD4 1452 aa22.65■■□□□ 1.22
Ccr9-202ENSMUST00000163559 Eea1Q8BL66 1411 aa22.65■■□□□ 1.22
Ccr9-202ENSMUST00000163559 Ncapd3Q6ZQK0 1506 aa22.64■■□□□ 1.22
Ccr9-202ENSMUST00000163559 Anks4bQ8K3X6 423 aa22.64■■□□□ 1.21
Ccr9-202ENSMUST00000163559 TnnQ80Z71 1560 aa22.63■■□□□ 1.21
Ccr9-202ENSMUST00000163559 Lmod2Q3UHZ5 550 aa22.62■■□□□ 1.21
Ccr9-202ENSMUST00000163559 Wdr62Q3U3T8 1523 aa22.58■■□□□ 1.21
Ccr9-202ENSMUST00000163559 Fam50aQ9WV03 339 aaKnown RBP22.56■■□□□ 1.2
Ccr9-202ENSMUST00000163559 Mapk8ip2Q9ERE9 830 aa22.55■■□□□ 1.2
Ccr9-202ENSMUST00000163559 NrkQ9R0G8 1455 aa22.52■■□□□ 1.2
Ccr9-202ENSMUST00000163559 BlmO88700 1416 aa22.5■■□□□ 1.19
Ccr9-202ENSMUST00000163559 Shroom4Q1W617 1475 aa22.49■■□□□ 1.19
Ccr9-202ENSMUST00000163559 1700123L14RikQ3V2K7 440 aa22.49■■□□□ 1.19
Ccr9-202ENSMUST00000163559 Ercc6F8VPZ5 1481 aa22.48■■□□□ 1.19
Ccr9-202ENSMUST00000163559 Lamc3Q9R0B6 1581 aa22.48■■□□□ 1.19
Ccr9-202ENSMUST00000163559 Gm38655A0A286YDK6 273 aa22.47■■□□□ 1.19
Ccr9-202ENSMUST00000163559 Camsap1A2AHC3 1581 aa22.44■■□□□ 1.18
Ccr9-202ENSMUST00000163559 Arhgef5E9Q7D5 1581 aa22.43■■□□□ 1.18
Ccr9-202ENSMUST00000163559 Baz1bQ9Z277 1479 aa22.42■■□□□ 1.18
Ccr9-202ENSMUST00000163559 AqrQ8CFQ3 1481 aaKnown RBP22.42■■□□□ 1.18
Ccr9-202ENSMUST00000163559 Npm1Q61937 292 aaKnown RBP22.39■■□□□ 1.18
Ccr9-202ENSMUST00000163559 Ccdc18Q640L5 1455 aa22.39■■□□□ 1.18
Ccr9-202ENSMUST00000163559 Ubl4bQ9CQ84 188 aa22.38■■□□□ 1.17
Retrieved 100 of 22,080 RNA–protein pairs in 127.9 ms