RNA–Protein interactions for RNA: ENSMUST00000159337.7

Vcan-205, Transcript of Versican core protein, mousemouse

TSL 1 (best) BASIC

Gene Vcan, Length 2,273 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-205ENSMUST00000159337 NischQ80TM9 1593 aa26.95■■□□□ 1.9
Vcan-205ENSMUST00000159337 Gm35339A0A140LHH9 1649 aa26.35■■□□□ 1.81
Vcan-205ENSMUST00000159337 Abcc9P70170 1546 aa26.28■■□□□ 1.8
Vcan-205ENSMUST00000159337 Rtl1Q7M732 1744 aa25.84■■□□□ 1.73
Vcan-205ENSMUST00000159337 Abcc8B2RUS7 1588 aa25.47■■□□□ 1.67
Vcan-205ENSMUST00000159337 Ccdc180J3QNE4 1664 aa25.42■■□□□ 1.66
Vcan-205ENSMUST00000159337 Rhox8Q6VSS7 320 aa25.32■■□□□ 1.64
Vcan-205ENSMUST00000159337 Rpgrip1Q9EPQ2 1331 aa25.07■■□□□ 1.6
Vcan-205ENSMUST00000159337 Zcchc6Q5BLK4 1491 aaKnown RBP24.72■■□□□ 1.55
Vcan-205ENSMUST00000159337 Acin1Q9JIX8 1338 aaKnown RBP24.39■■□□□ 1.5
Vcan-205ENSMUST00000159337 Dcaf1Q80TR8 1506 aa24.09■■□□□ 1.45
Vcan-205ENSMUST00000159337 HrcG5E8J6 738 aa24.02■■□□□ 1.44
Vcan-205ENSMUST00000159337 Ehmt2Q9Z148 1263 aaKnown RBP23.73■■□□□ 1.39
Vcan-205ENSMUST00000159337 Rb1cc1Q9ESK9 1588 aa23.67■■□□□ 1.38
Vcan-205ENSMUST00000159337 Pcgf6Q99NA9 353 aa23.66■■□□□ 1.38
Vcan-205ENSMUST00000159337 ScribQ80U72 1612 aa23.48■■□□□ 1.35
Vcan-205ENSMUST00000159337 Baz1aO88379 1555 aa23.44■■□□□ 1.34
Vcan-205ENSMUST00000159337 Ccdc136Q3TVA9 1136 aa23.4■■□□□ 1.34
Vcan-205ENSMUST00000159337 Trim41Q5NCC3 630 aa23.28■■□□□ 1.32
Vcan-205ENSMUST00000159337 Cep164Q5DU05 1446 aa23.2■■□□□ 1.3
Vcan-205ENSMUST00000159337 Kdm5dQ62240 1548 aa23.14■■□□□ 1.3
Vcan-205ENSMUST00000159337 Supt5hO55201 1082 aaKnown RBP23.08■■□□□ 1.29
Vcan-205ENSMUST00000159337 Smarca2Q6DIC0 1577 aa22.99■■□□□ 1.27
Vcan-205ENSMUST00000159337 Crybg2B7ZCC2 1516 aa22.9■■□□□ 1.26
Vcan-205ENSMUST00000159337 NacadQ5SWP3 1504 aa22.85■■□□□ 1.25
Vcan-205ENSMUST00000159337 Neurod1Q60867 357 aa22.75■■□□□ 1.23
Vcan-205ENSMUST00000159337 Rsf1E9PWW9 1441 aaKnown RBP22.65■■□□□ 1.22
Vcan-205ENSMUST00000159337 NefmP08553 848 aa22.62■■□□□ 1.21
Vcan-205ENSMUST00000159337 Chic1Q8CBW7 227 aa22.5■■□□□ 1.19
Vcan-205ENSMUST00000159337 Zeb1Q64318 1117 aa22.49■■□□□ 1.19
Vcan-205ENSMUST00000159337 Las1lA2BE28 776 aaKnown RBP22.46■■□□□ 1.19
Vcan-205ENSMUST00000159337 Mier1Q5UAK0 511 aa22.43■■□□□ 1.18
Vcan-205ENSMUST00000159337 Cngb1E1AZ71 1325 aa22.41■■□□□ 1.18
Vcan-205ENSMUST00000159337 Ccdc88bQ4QRL3 1481 aa22.4■■□□□ 1.18
Vcan-205ENSMUST00000159337 Brd4Q9ESU6 1400 aaKnown RBP22.39■■□□□ 1.17
Vcan-205ENSMUST00000159337 Golga3P55937 1487 aa22.36■■□□□ 1.17
Vcan-205ENSMUST00000159337 Sall2Q9QX96 1004 aa22.36■■□□□ 1.17
Vcan-205ENSMUST00000159337 Gab3Q8BSM5 595 aa22.35■■□□□ 1.17
Vcan-205ENSMUST00000159337 Sycp2Q9CUU3 1500 aa22.35■■□□□ 1.17
Vcan-205ENSMUST00000159337 Anks4bQ8K3X6 423 aa22.23■■□□□ 1.15
Vcan-205ENSMUST00000159337 Cecr2E9Q2Z1 1453 aa22.18■■□□□ 1.14
Vcan-205ENSMUST00000159337 Synj1Q8CHC4 1574 aa22.17■■□□□ 1.14
Vcan-205ENSMUST00000159337 Top2bQ64511 1612 aa22.11■■□□□ 1.13
Vcan-205ENSMUST00000159337 1700123L14RikQ3V2K7 440 aa22.07■■□□□ 1.12
Vcan-205ENSMUST00000159337 Csrnp3P59055 597 aa21.97■■□□□ 1.11
Vcan-205ENSMUST00000159337 CftrP26361 1476 aa21.96■■□□□ 1.11
Vcan-205ENSMUST00000159337 Rapgef2Q8CHG7 1496 aa21.91■■□□□ 1.1
Vcan-205ENSMUST00000159337 Aebp2Q9Z248 504 aaKnown RBP21.9■■□□□ 1.1
Vcan-205ENSMUST00000159337 ClspnQ80YR7 1315 aa21.9■■□□□ 1.1
Vcan-205ENSMUST00000159337 Cttnbp2B9EJA2 1648 aa21.85■■□□□ 1.09
Vcan-205ENSMUST00000159337 Wdr66E9Q743 1299 aa21.85■■□□□ 1.09
Vcan-205ENSMUST00000159337 Cc2d2aQ8CFW7 1633 aa21.84■■□□□ 1.09
Vcan-205ENSMUST00000159337 Cdk11bP24788 784 aaKnown RBP21.83■■□□□ 1.09
Vcan-205ENSMUST00000159337 Aplp2Q06335 707 aa21.81■■□□□ 1.08
Vcan-205ENSMUST00000159337 UbtfP25976 765 aaKnown RBP21.8■■□□□ 1.08
Vcan-205ENSMUST00000159337 BicraF8VPZ9 1578 aa21.79■■□□□ 1.08
Vcan-205ENSMUST00000159337 Nop58Q6DFW4 536 aaKnown RBP21.78■■□□□ 1.08
Vcan-205ENSMUST00000159337 Esf1Q3V1V3 845 aaKnown RBP21.73■■□□□ 1.07
Vcan-205ENSMUST00000159337 Top2aQ01320 1528 aaKnown RBP21.73■■□□□ 1.07
Vcan-205ENSMUST00000159337 Myt1Q8CFC2 1127 aa21.71■■□□□ 1.07
Vcan-205ENSMUST00000159337 Fmn1Q05860 1466 aa21.67■■□□□ 1.06
Vcan-205ENSMUST00000159337 Cep162Q6ZQ06 1403 aa21.67■■□□□ 1.06
Vcan-205ENSMUST00000159337 TonslQ6NZL6 1363 aa21.62■■□□□ 1.05
Vcan-205ENSMUST00000159337 CenpbP27790 599 aa21.61■■□□□ 1.05
Vcan-205ENSMUST00000159337 Eif4g1Q6NZJ6 1600 aaKnown RBP21.55■■□□□ 1.04
Vcan-205ENSMUST00000159337 Ncapd3Q6ZQK0 1506 aa21.53■■□□□ 1.04
Vcan-205ENSMUST00000159337 Smarca4Q3TKT4 1613 aaKnown RBP21.52■■□□□ 1.04
Vcan-205ENSMUST00000159337 Ppargc1bQ8VHJ7 1014 aa21.45■■□□□ 1.02
Vcan-205ENSMUST00000159337 Clip1Q922J3 1391 aa21.39■■□□□ 1.01
Vcan-205ENSMUST00000159337 Myt1lP97500 1187 aa21.39■■□□□ 1.01
Vcan-205ENSMUST00000159337 Kdm5bQ80Y84 1544 aa21.3■■□□□ 1
Vcan-205ENSMUST00000159337 Plekhg3Q4VAC9 1341 aa21.29■■□□□ 1
Vcan-205ENSMUST00000159337 Gm38655A0A286YDK6 273 aa21.26■□□□□ 0.99
Vcan-205ENSMUST00000159337 Npm2Q80W85 207 aa21.23■□□□□ 0.99
Vcan-205ENSMUST00000159337 TnnQ80Z71 1560 aa21.2■□□□□ 0.98
Vcan-205ENSMUST00000159337 Tnnt3Q9QZ47 272 aa21.18■□□□□ 0.98
Vcan-205ENSMUST00000159337 Arhgap35Q91YM2 1499 aa21.17■□□□□ 0.98
Vcan-205ENSMUST00000159337 Arap1Q4LDD4 1452 aa21.16■□□□□ 0.98
Vcan-205ENSMUST00000159337 Iqgap2Q3UQ44 1575 aa21.15■□□□□ 0.98
Vcan-205ENSMUST00000159337 TchhA0A0B4J1F9 1599 aa21.13■□□□□ 0.97
Vcan-205ENSMUST00000159337 Arhgef5E9Q7D5 1581 aa21.11■□□□□ 0.97
Vcan-205ENSMUST00000159337 Eea1Q8BL66 1411 aa21.1■□□□□ 0.97
Vcan-205ENSMUST00000159337 Hnrnpul2Q00PI9 745 aaKnown RBP21.1■□□□□ 0.97
Vcan-205ENSMUST00000159337 Ccdc18Q640L5 1455 aa21.1■□□□□ 0.97
Vcan-205ENSMUST00000159337 NrkQ9R0G8 1455 aa21.09■□□□□ 0.97
Vcan-205ENSMUST00000159337 Baz1bQ9Z277 1479 aa21■□□□□ 0.95
Vcan-205ENSMUST00000159337 PtprkP35822 1457 aa20.99■□□□□ 0.95
Vcan-205ENSMUST00000159337 Fam71e1A1L3C1 212 aa20.98■□□□□ 0.95
Vcan-205ENSMUST00000159337 Tiam1Q60610 1591 aa20.98■□□□□ 0.95
Vcan-205ENSMUST00000159337 SafbD3YXK2 937 aaKnown RBP20.98■□□□□ 0.95
Vcan-205ENSMUST00000159337 Eid3Q3V124 375 aa20.98■□□□□ 0.95
Vcan-205ENSMUST00000159337 Map3k1P53349 1493 aa20.97■□□□□ 0.95
Vcan-205ENSMUST00000159337 Rpap1Q80TE0 1409 aa20.97■□□□□ 0.95
Vcan-205ENSMUST00000159337 Setd5Q5XJV7 1441 aa20.92■□□□□ 0.94
Vcan-205ENSMUST00000159337 Erich3F6QRE9 1637 aa20.89■□□□□ 0.93
Vcan-205ENSMUST00000159337 Znf710Q3U288 666 aa20.88■□□□□ 0.93
Vcan-205ENSMUST00000159337 Mapk8ip2Q9ERE9 830 aa20.88■□□□□ 0.93
Vcan-205ENSMUST00000159337 Shroom4Q1W617 1475 aa20.88■□□□□ 0.93
Vcan-205ENSMUST00000159337 Ap3b1Q9Z1T1 1105 aa20.88■□□□□ 0.93
Vcan-205ENSMUST00000159337 Atad2bE9Q166 1460 aaKnown RBP20.87■□□□□ 0.93
Retrieved 100 of 22,080 RNA–protein pairs in 12.7 ms