RNA–Protein interactions for RNA: ENSMUST00000122993.7

Hmg20b-204, Transcript of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, mouse

TSL 1 (best) BASIC

Gene Hmg20b, Length 1,502 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (Experimental data)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
Hmg20b-204	ENSMUST00000122993	Gm35339	A0A140LHH9	1649 aa		37.5	■■■■□ 3.59
Hmg20b-204	ENSMUST00000122993	Nisch	Q80TM9	1593 aa		37.13	■■■■□ 3.53
Hmg20b-204	ENSMUST00000122993	Abcc9	P70170	1546 aa		35.91	■■■■□ 3.34
Hmg20b-204	ENSMUST00000122993	Abcc8	B2RUS7	1588 aa		35.88	■■■■□ 3.33
Hmg20b-204	ENSMUST00000122993	Scrib	Q80U72	1612 aa		34.49	■■■■□ 3.11
Hmg20b-204	ENSMUST00000122993	Nacad	Q5SWP3	1504 aa		33.51	■■■□□ 2.95
Hmg20b-204	ENSMUST00000122993	Kdm5d	Q62240	1548 aa		33.43	■■■□□ 2.94
Hmg20b-204	ENSMUST00000122993	Dcaf1	Q80TR8	1506 aa		33.03	■■■□□ 2.88
Hmg20b-204	ENSMUST00000122993	Sycp2	Q9CUU3	1500 aa		32.84	■■■□□ 2.85
Hmg20b-204	ENSMUST00000122993	Rb1cc1	Q9ESK9	1588 aa		32.35	■■■□□ 2.77
Hmg20b-204	ENSMUST00000122993	Bicra	F8VPZ9	1578 aa		32.32	■■■□□ 2.77
Hmg20b-204	ENSMUST00000122993	Rhox8	Q6VSS7	320 aa		32.29	■■■□□ 2.76
Hmg20b-204	ENSMUST00000122993	Baz1a	O88379	1555 aa		31.91	■■■□□ 2.7
Hmg20b-204	ENSMUST00000122993	Ccdc180	J3QNE4	1664 aa		31.83	■■■□□ 2.69
Hmg20b-204	ENSMUST00000122993	Crybg2	B7ZCC2	1516 aa		31.82	■■■□□ 2.68
Hmg20b-204	ENSMUST00000122993	Pds5b	Q4VA53	1446 aa	Known RBP	31.52	■■■□□ 2.64
Hmg20b-204	ENSMUST00000122993	Zcchc6	Q5BLK4	1491 aa	Known RBP	31.5	■■■□□ 2.63
Hmg20b-204	ENSMUST00000122993	Dnajc5b	Q9CQ94	199 aa		31.44	■■■□□ 2.62
Hmg20b-204	ENSMUST00000122993	Atad2b	E9Q166	1460 aa	Known RBP	31.21	■■■□□ 2.59
Hmg20b-204	ENSMUST00000122993	Thoc2	B1AZI6	1594 aa	Known RBP	31.12	■■■□□ 2.57
Hmg20b-204	ENSMUST00000122993	Smarca2	Q6DIC0	1577 aa		30.96	■■■□□ 2.55
Hmg20b-204	ENSMUST00000122993	Smarca4	Q3TKT4	1613 aa	Known RBP	30.93	■■■□□ 2.54
Hmg20b-204	ENSMUST00000122993	Cecr2	E9Q2Z1	1453 aa		30.89	■■■□□ 2.54
Hmg20b-204	ENSMUST00000122993	Ercc6	F8VPZ5	1481 aa		30.84	■■■□□ 2.53
Hmg20b-204	ENSMUST00000122993	Iqgap2	Q3UQ44	1575 aa		30.75	■■■□□ 2.51
Hmg20b-204	ENSMUST00000122993	Cc2d2a	Q8CFW7	1633 aa		30.66	■■■□□ 2.5
Hmg20b-204	ENSMUST00000122993	Wdr62	Q3U3T8	1523 aa		30.48	■■■□□ 2.47
Hmg20b-204	ENSMUST00000122993	Frmpd1	A2AKB4	1549 aa		30.46	■■■□□ 2.47
Hmg20b-204	ENSMUST00000122993	Fam135a	Q6NS59	1506 aa		30.46	■■■□□ 2.47
Hmg20b-204	ENSMUST00000122993	Rtl1	Q7M732	1744 aa		30.44	■■■□□ 2.46
Hmg20b-204	ENSMUST00000122993	Phldb1	Q6PDH0	1371 aa	Known RBP	30.34	■■■□□ 2.45
Hmg20b-204	ENSMUST00000122993	Cftr	P26361	1476 aa		30.2	■■■□□ 2.43
Hmg20b-204	ENSMUST00000122993	Ccdc136	Q3TVA9	1136 aa		30.2	■■■□□ 2.42
Hmg20b-204	ENSMUST00000122993	Brd4	Q9ESU6	1400 aa	Known RBP	30.18	■■■□□ 2.42
Hmg20b-204	ENSMUST00000122993	Baz1b	Q9Z277	1479 aa		30.14	■■■□□ 2.42
Hmg20b-204	ENSMUST00000122993	Ubl4b	Q9CQ84	188 aa		30.12	■■■□□ 2.41
Hmg20b-204	ENSMUST00000122993	Cttnbp2	B9EJA2	1648 aa		30.12	■■■□□ 2.41
Hmg20b-204	ENSMUST00000122993	Synj1	Q8CHC4	1574 aa		30.11	■■■□□ 2.41
Hmg20b-204	ENSMUST00000122993	Unc13a	Q4KUS2	1712 aa		29.92	■■■□□ 2.38
Hmg20b-204	ENSMUST00000122993	Esf1	Q3V1V3	845 aa	Known RBP	29.81	■■■□□ 2.36
Hmg20b-204	ENSMUST00000122993	Mrc2	Q64449	1479 aa		29.79	■■■□□ 2.36
Hmg20b-204	ENSMUST00000122993	Trim41	Q5NCC3	630 aa		29.77	■■■□□ 2.36
Hmg20b-204	ENSMUST00000122993	Rsf1	E9PWW9	1441 aa	Known RBP	29.51	■■■□□ 2.31
Hmg20b-204	ENSMUST00000122993	Kif15	Q6P9L6	1387 aa		29.46	■■■□□ 2.31
Hmg20b-204	ENSMUST00000122993	Cux2	P70298	1426 aa		29.41	■■■□□ 2.3
Hmg20b-204	ENSMUST00000122993	Lamc3	Q9R0B6	1581 aa		29.29	■■■□□ 2.28
Hmg20b-204	ENSMUST00000122993	Npm1	Q61937	292 aa	Known RBP	29.19	■■■□□ 2.26
Hmg20b-204	ENSMUST00000122993	Golga3	P55937	1487 aa		29.12	■■■□□ 2.25
Hmg20b-204	ENSMUST00000122993	Cngb1	E1AZ71	1325 aa		29.09	■■■□□ 2.25
Hmg20b-204	ENSMUST00000122993	Lrriq1	Q0P5X1	1673 aa		29.07	■■■□□ 2.24
Hmg20b-204	ENSMUST00000122993	Kif21a	Q9QXL2	1672 aa		29.07	■■■□□ 2.24
Hmg20b-204	ENSMUST00000122993	Cep164	Q5DU05	1446 aa		29.03	■■■□□ 2.24
Hmg20b-204	ENSMUST00000122993	Top2b	Q64511	1612 aa		29	■■■□□ 2.23
Hmg20b-204	ENSMUST00000122993	Tnn	Q80Z71	1560 aa		28.93	■■■□□ 2.22
Hmg20b-204	ENSMUST00000122993	Ccdc18	Q640L5	1455 aa		28.92	■■■□□ 2.22
Hmg20b-204	ENSMUST00000122993	Il27	Q8K3I6	234 aa		28.91	■■■□□ 2.22
Hmg20b-204	ENSMUST00000122993	Dhx29	Q6PGC1	1365 aa	Known RBP	28.79	■■■□□ 2.2
Hmg20b-204	ENSMUST00000122993	Fmn1	Q05860	1466 aa		28.77	■■■□□ 2.2
Hmg20b-204	ENSMUST00000122993	Lrpprc	Q6PB66	1392 aa	Known RBP	28.77	■■■□□ 2.2
Hmg20b-204	ENSMUST00000122993	Camsap1	A2AHC3	1581 aa		28.76	■■■□□ 2.19
Hmg20b-204	ENSMUST00000122993	Urb2	E9Q7L1	1524 aa	Known RBP	28.68	■■■□□ 2.18
Hmg20b-204	ENSMUST00000122993	Eif4g3	Q80XI3	1579 aa	Known RBP	28.67	■■■□□ 2.18
Hmg20b-204	ENSMUST00000122993	Plb1	Q3TTY0	1478 aa		28.67	■■■□□ 2.18
Hmg20b-204	ENSMUST00000122993	Crocc2	F6XLV1	1638 aa		28.59	■■■□□ 2.17
Hmg20b-204	ENSMUST00000122993	Pogz	Q8BZH4	1409 aa	Known RBP	28.58	■■■□□ 2.17
Hmg20b-204	ENSMUST00000122993	Duox2	A2AQ99	1517 aa		28.44	■■■□□ 2.14
Hmg20b-204	ENSMUST00000122993	Ift140	E9PY46	1464 aa		28.43	■■■□□ 2.14
Hmg20b-204	ENSMUST00000122993	Dnajc5	P60904	198 aa		28.43	■■■□□ 2.14
Hmg20b-204	ENSMUST00000122993	Grin2b	Q01097	1482 aa		28.41	■■■□□ 2.14
Hmg20b-204	ENSMUST00000122993	Ccdc88b	Q4QRL3	1481 aa		28.34	■■■□□ 2.13
Hmg20b-204	ENSMUST00000122993	Shroom2	A2ALU4	1481 aa		28.32	■■■□□ 2.12
Hmg20b-204	ENSMUST00000122993	Efcab5	A0JP43	1406 aa		28.27	■■■□□ 2.12
Hmg20b-204	ENSMUST00000122993	Rusc2	Q80U22	1514 aa		28.26	■■■□□ 2.11
Hmg20b-204	ENSMUST00000122993	Disp1	Q3TDN0	1521 aa		28.23	■■■□□ 2.11
Hmg20b-204	ENSMUST00000122993	Chic1	Q8CBW7	227 aa		28.2	■■■□□ 2.1
Hmg20b-204	ENSMUST00000122993	Top2a	Q01320	1528 aa	Known RBP	28.2	■■■□□ 2.1
Hmg20b-204	ENSMUST00000122993	Samd9l	Q69Z37	1561 aa		28.16	■■■□□ 2.1
Hmg20b-204	ENSMUST00000122993	Pabpn1	Q8CCS6	302 aa	Known RBP	28.15	■■■□□ 2.1
Hmg20b-204	ENSMUST00000122993	Nrk	Q9R0G8	1455 aa		28.13	■■■□□ 2.09
Hmg20b-204	ENSMUST00000122993	Nup160	Q9Z0W3	1402 aa	Known RBP	28.09	■■■□□ 2.09
Hmg20b-204	ENSMUST00000122993	Cc2d2b	A0A286YDU8	1405 aa		28.08	■■■□□ 2.09
Hmg20b-204	ENSMUST00000122993	Pbrm1	Q8BSQ9	1634 aa	Known RBP	28.04	■■■□□ 2.08
Hmg20b-204	ENSMUST00000122993	Rad54l2	Q99NG0	1466 aa		28.03	■■■□□ 2.08
Hmg20b-204	ENSMUST00000122993	Pelp1	Q9DBD5	1123 aa	Known RBP	28.01	■■■□□ 2.07
Hmg20b-204	ENSMUST00000122993	Shroom4	Q1W617	1475 aa		27.98	■■■□□ 2.07
Hmg20b-204	ENSMUST00000122993	Ptprk	P35822	1457 aa		27.95	■■■□□ 2.07
Hmg20b-204	ENSMUST00000122993	Grin2a	P35436	1464 aa		27.94	■■■□□ 2.06
Hmg20b-204	ENSMUST00000122993	Col17a1	Q07563	1470 aa		27.92	■■■□□ 2.06
Hmg20b-204	ENSMUST00000122993	Magi3	Q9EQJ9	1476 aa		27.92	■■■□□ 2.06
Hmg20b-204	ENSMUST00000122993	Setd1b	Q8CFT2	1985 aa		27.91	■■■□□ 2.06
Hmg20b-204	ENSMUST00000122993	Aqr	Q8CFQ3	1481 aa	Known RBP	27.87	■■■□□ 2.05
Hmg20b-204	ENSMUST00000122993	Zeb1	Q64318	1117 aa		27.85	■■■□□ 2.05
Hmg20b-204	ENSMUST00000122993	Synm	Q70IV5	1561 aa		27.8	■■■□□ 2.04
Hmg20b-204	ENSMUST00000122993	Fgd6	Q69ZL1	1399 aa		27.79	■■■□□ 2.04
Hmg20b-204	ENSMUST00000122993	Pla2r1	Q62028	1487 aa		27.77	■■■□□ 2.04
Hmg20b-204	ENSMUST00000122993	Npm2	Q80W85	207 aa		27.75	■■■□□ 2.03
Hmg20b-204	ENSMUST00000122993	Hrc	G5E8J6	738 aa		27.69	■■■□□ 2.02
Hmg20b-204	ENSMUST00000122993	Gpatch8	A2A6A1	1505 aa		27.67	■■■□□ 2.02
Hmg20b-204	ENSMUST00000122993	Zcchc11	B2RX14	1644 aa	Known RBP	27.66	■■■□□ 2.02
Hmg20b-204	ENSMUST00000122993	Mroh2b	Q7M6Y6	1581 aa		27.62	■■■□□ 2.01

Retrieved 100 of 22,080 RNA–protein pairs in 41.6 ms