RNA–Protein interactions for RNA: ENSMUST00000117411.7

Ssbp1-203, Transcript of Single-stranded DNA-binding protein, mitochondrial, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssbp1, Length 933 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp1-203ENSMUST00000117411 Gm35339A0A140LHH9 1649 aa49.1■■■■■ 5.45
Ssbp1-203ENSMUST00000117411 NischQ80TM9 1593 aa47.96■■■■■ 5.27
Ssbp1-203ENSMUST00000117411 Abcc8B2RUS7 1588 aa46.71■■■■■ 5.07
Ssbp1-203ENSMUST00000117411 Abcc9P70170 1546 aa46.68■■■■■ 5.06
Ssbp1-203ENSMUST00000117411 ScribQ80U72 1612 aa45.73■■■■■ 4.91
Ssbp1-203ENSMUST00000117411 NacadQ5SWP3 1504 aa43.94■■■■■ 4.63
Ssbp1-203ENSMUST00000117411 Kdm5dQ62240 1548 aa43.89■■■■■ 4.62
Ssbp1-203ENSMUST00000117411 Sycp2Q9CUU3 1500 aa43.19■■■■■ 4.5
Ssbp1-203ENSMUST00000117411 Dnajc5bQ9CQ94 199 aa43.13■■■■■ 4.49
Ssbp1-203ENSMUST00000117411 BicraF8VPZ9 1578 aa42.87■■■■■ 4.45
Ssbp1-203ENSMUST00000117411 Dcaf1Q80TR8 1506 aa42.76■■■■■ 4.44
Ssbp1-203ENSMUST00000117411 Thoc2B1AZI6 1594 aaKnown RBP41.82■■■■■ 4.29
Ssbp1-203ENSMUST00000117411 Rb1cc1Q9ESK9 1588 aa41.74■■■■■ 4.27
Ssbp1-203ENSMUST00000117411 Pds5bQ4VA53 1446 aaKnown RBP41.63■■■■■ 4.26
Ssbp1-203ENSMUST00000117411 Atad2bE9Q166 1460 aaKnown RBP41.09■■■■■ 4.17
Ssbp1-203ENSMUST00000117411 Cc2d2aQ8CFW7 1633 aa41.06■■■■■ 4.16
Ssbp1-203ENSMUST00000117411 Baz1aO88379 1555 aa41.05■■■■■ 4.16
Ssbp1-203ENSMUST00000117411 Crybg2B7ZCC2 1516 aa40.97■■■■■ 4.15
Ssbp1-203ENSMUST00000117411 Ccdc180J3QNE4 1664 aa40.84■■■■■ 4.13
Ssbp1-203ENSMUST00000117411 Ercc6F8VPZ5 1481 aa40.7■■■■■ 4.11
Ssbp1-203ENSMUST00000117411 Fam135aQ6NS59 1506 aa40.62■■■■■ 4.09
Ssbp1-203ENSMUST00000117411 Zcchc6Q5BLK4 1491 aaKnown RBP40.59■■■■■ 4.09
Ssbp1-203ENSMUST00000117411 Smarca2Q6DIC0 1577 aa40.57■■■■■ 4.09
Ssbp1-203ENSMUST00000117411 Smarca4Q3TKT4 1613 aaKnown RBP40.42■■■■■ 4.06
Ssbp1-203ENSMUST00000117411 Iqgap2Q3UQ44 1575 aa40.36■■■■■ 4.05
Ssbp1-203ENSMUST00000117411 Rhox8Q6VSS7 320 aa40.33■■■■■ 4.05
Ssbp1-203ENSMUST00000117411 Wdr62Q3U3T8 1523 aa40.19■■■■■ 4.02
Ssbp1-203ENSMUST00000117411 Cecr2E9Q2Z1 1453 aa40.15■■■■■ 4.02
Ssbp1-203ENSMUST00000117411 Frmpd1A2AKB4 1549 aa40.15■■■■■ 4.02
Ssbp1-203ENSMUST00000117411 Phldb1Q6PDH0 1371 aaKnown RBP40.01■■■■■ 4
Ssbp1-203ENSMUST00000117411 Baz1bQ9Z277 1479 aa39.93■■■■□ 3.98
Ssbp1-203ENSMUST00000117411 Dnajc5P60904 198 aa39.78■■■■□ 3.96
Ssbp1-203ENSMUST00000117411 Ubl4bQ9CQ84 188 aa39.65■■■■□ 3.94
Ssbp1-203ENSMUST00000117411 Unc13aQ4KUS2 1712 aa39.65■■■■□ 3.94
Ssbp1-203ENSMUST00000117411 Mrc2Q64449 1479 aa39.61■■■■□ 3.93
Ssbp1-203ENSMUST00000117411 Trim41Q5NCC3 630 aa39.33■■■■□ 3.89
Ssbp1-203ENSMUST00000117411 CftrP26361 1476 aa38.98■■■■□ 3.83
Ssbp1-203ENSMUST00000117411 Cttnbp2B9EJA2 1648 aa38.92■■■■□ 3.82
Ssbp1-203ENSMUST00000117411 Lrriq1Q0P5X1 1673 aa38.9■■■■□ 3.82
Ssbp1-203ENSMUST00000117411 Synj1Q8CHC4 1574 aa38.84■■■■□ 3.81
Ssbp1-203ENSMUST00000117411 Rsf1E9PWW9 1441 aaKnown RBP38.63■■■■□ 3.77
Ssbp1-203ENSMUST00000117411 Kif21aQ9QXL2 1672 aa38.52■■■■□ 3.76
Ssbp1-203ENSMUST00000117411 Cux2P70298 1426 aa38.51■■■■□ 3.76
Ssbp1-203ENSMUST00000117411 Brd4Q9ESU6 1400 aaKnown RBP38.46■■■■□ 3.75
Ssbp1-203ENSMUST00000117411 Shroom2A2ALU4 1481 aa38.35■■■■□ 3.73
Ssbp1-203ENSMUST00000117411 Kif15Q6P9L6 1387 aa38.3■■■■□ 3.72
Ssbp1-203ENSMUST00000117411 Eif4g3Q80XI3 1579 aaKnown RBP38.29■■■■□ 3.72
Ssbp1-203ENSMUST00000117411 Rtl1Q7M732 1744 aa38.21■■■■□ 3.71
Ssbp1-203ENSMUST00000117411 Col17a1Q07563 1470 aa38.05■■■■□ 3.68
Ssbp1-203ENSMUST00000117411 Lamc3Q9R0B6 1581 aa38.04■■■■□ 3.68
Ssbp1-203ENSMUST00000117411 Ccdc136Q3TVA9 1136 aa38.01■■■■□ 3.68
Ssbp1-203ENSMUST00000117411 Esf1Q3V1V3 845 aaKnown RBP37.98■■■■□ 3.67
Ssbp1-203ENSMUST00000117411 Npm1Q61937 292 aaKnown RBP37.88■■■■□ 3.65
Ssbp1-203ENSMUST00000117411 Urb2E9Q7L1 1524 aaKnown RBP37.87■■■■□ 3.65
Ssbp1-203ENSMUST00000117411 Plb1Q3TTY0 1478 aa37.74■■■■□ 3.63
Ssbp1-203ENSMUST00000117411 Cep164Q5DU05 1446 aa37.74■■■■□ 3.63
Ssbp1-203ENSMUST00000117411 Top2bQ64511 1612 aa37.68■■■■□ 3.62
Ssbp1-203ENSMUST00000117411 Pabpn1Q8CCS6 302 aaKnown RBP37.65■■■■□ 3.62
Ssbp1-203ENSMUST00000117411 Dhx29Q6PGC1 1365 aaKnown RBP37.64■■■■□ 3.62
Ssbp1-203ENSMUST00000117411 Crocc2F6XLV1 1638 aa37.45■■■■□ 3.59
Ssbp1-203ENSMUST00000117411 Rusc2Q80U22 1514 aa37.41■■■■□ 3.58
Ssbp1-203ENSMUST00000117411 LrpprcQ6PB66 1392 aaKnown RBP37.39■■■■□ 3.58
Ssbp1-203ENSMUST00000117411 TnnQ80Z71 1560 aa37.38■■■■□ 3.57
Ssbp1-203ENSMUST00000117411 Ccdc18Q640L5 1455 aa37.34■■■■□ 3.57
Ssbp1-203ENSMUST00000117411 Il27Q8K3I6 234 aa37.34■■■■□ 3.57
Ssbp1-203ENSMUST00000117411 Zcchc11B2RX14 1644 aaKnown RBP37.33■■■■□ 3.57
Ssbp1-203ENSMUST00000117411 Pelp1Q9DBD5 1123 aaKnown RBP37.32■■■■□ 3.56
Ssbp1-203ENSMUST00000117411 Camsap1A2AHC3 1581 aa37.27■■■■□ 3.56
Ssbp1-203ENSMUST00000117411 Ift140E9PY46 1464 aa37.25■■■■□ 3.55
Ssbp1-203ENSMUST00000117411 PogzQ8BZH4 1409 aaKnown RBP37.12■■■■□ 3.53
Ssbp1-203ENSMUST00000117411 Pcdh10E9PXQ7 1057 aa37.02■■■■□ 3.52
Ssbp1-203ENSMUST00000117411 Disp1Q3TDN0 1521 aa36.96■■■■□ 3.51
Ssbp1-203ENSMUST00000117411 Duox2A2AQ99 1517 aa36.93■■■■□ 3.5
Ssbp1-203ENSMUST00000117411 Setd1bQ8CFT2 1985 aa36.89■■■■□ 3.5
Ssbp1-203ENSMUST00000117411 Arhgef5E9Q7D5 1581 aa36.84■■■■□ 3.49
Ssbp1-203ENSMUST00000117411 Golga3P55937 1487 aa36.84■■■■□ 3.49
Ssbp1-203ENSMUST00000117411 Adgrl3Q80TS3 1537 aa36.82■■■■□ 3.48
Ssbp1-203ENSMUST00000117411 Nup160Q9Z0W3 1402 aaKnown RBP36.81■■■■□ 3.48
Ssbp1-203ENSMUST00000117411 Samd9lQ69Z37 1561 aa36.73■■■■□ 3.47
Ssbp1-203ENSMUST00000117411 Cc2d2bA0A286YDU8 1405 aa36.7■■■■□ 3.47
Ssbp1-203ENSMUST00000117411 Pbrm1Q8BSQ9 1634 aaKnown RBP36.67■■■■□ 3.46
Ssbp1-203ENSMUST00000117411 Cep170Q6A065 1588 aa36.66■■■■□ 3.46
Ssbp1-203ENSMUST00000117411 Grin2bQ01097 1482 aa36.65■■■■□ 3.46
Ssbp1-203ENSMUST00000117411 PtprkP35822 1457 aa36.63■■■■□ 3.45
Ssbp1-203ENSMUST00000117411 Cngb1E1AZ71 1325 aa36.6■■■■□ 3.45
Ssbp1-203ENSMUST00000117411 Fmn1Q05860 1466 aa36.6■■■■□ 3.45
Ssbp1-203ENSMUST00000117411 Gapvd1Q6PAR5 1458 aa36.56■■■■□ 3.44
Ssbp1-203ENSMUST00000117411 Gm156Q58A37 223 aa36.56■■■■□ 3.44
Ssbp1-203ENSMUST00000117411 PtprtQ99M80 1454 aa36.56■■■■□ 3.44
Ssbp1-203ENSMUST00000117411 Ttbk1Q6PCN3 1308 aa36.51■■■■□ 3.43
Ssbp1-203ENSMUST00000117411 Fgd6Q69ZL1 1399 aa36.47■■■■□ 3.43
Ssbp1-203ENSMUST00000117411 Rad54l2Q99NG0 1466 aa36.45■■■■□ 3.43
Ssbp1-203ENSMUST00000117411 AqrQ8CFQ3 1481 aaKnown RBP36.44■■■■□ 3.42
Ssbp1-203ENSMUST00000117411 Magi3Q9EQJ9 1476 aa36.42■■■■□ 3.42
Ssbp1-203ENSMUST00000117411 Grin2aP35436 1464 aa36.4■■■■□ 3.42
Ssbp1-203ENSMUST00000117411 Efcab5A0JP43 1406 aa36.38■■■■□ 3.41
Ssbp1-203ENSMUST00000117411 Pprc1Q6NZN1 1644 aa36.34■■■■□ 3.41
Ssbp1-203ENSMUST00000117411 Abcc1O35379 1528 aa36.25■■■■□ 3.39
Ssbp1-203ENSMUST00000117411 AknaQ80VW7 1404 aa36.19■■■■□ 3.38
Ssbp1-203ENSMUST00000117411 Ythdc2B2RR83 1445 aaKnown RBP36.17■■■■□ 3.38
Retrieved 100 of 22,080 RNA–protein pairs in 12.7 ms