RNA–Protein interactions for RNA: ENSMUST00000116492.2

Ubp1-203, Transcript of Upstream-binding protein 1, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Ubp1, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-203ENSMUST00000116492 NischQ80TM9 1593 aa47.27■■■■■ 5.16
Ubp1-203ENSMUST00000116492 Gm35339A0A140LHH9 1649 aa46.69■■■■■ 5.06
Ubp1-203ENSMUST00000116492 Abcc9P70170 1546 aa45.97■■■■■ 4.95
Ubp1-203ENSMUST00000116492 Abcc8B2RUS7 1588 aa44.96■■■■■ 4.79
Ubp1-203ENSMUST00000116492 Rhox8Q6VSS7 320 aa43.42■■■■■ 4.54
Ubp1-203ENSMUST00000116492 Rtl1Q7M732 1744 aa43.1■■■■■ 4.49
Ubp1-203ENSMUST00000116492 Ccdc180J3QNE4 1664 aa42.19■■■■■ 4.34
Ubp1-203ENSMUST00000116492 Dcaf1Q80TR8 1506 aa42.09■■■■■ 4.33
Ubp1-203ENSMUST00000116492 ScribQ80U72 1612 aa41.92■■■■■ 4.3
Ubp1-203ENSMUST00000116492 Zcchc6Q5BLK4 1491 aaKnown RBP41.45■■■■■ 4.23
Ubp1-203ENSMUST00000116492 Rb1cc1Q9ESK9 1588 aa41.4■■■■■ 4.22
Ubp1-203ENSMUST00000116492 Kdm5dQ62240 1548 aa41.14■■■■■ 4.18
Ubp1-203ENSMUST00000116492 Baz1aO88379 1555 aa40.98■■■■■ 4.15
Ubp1-203ENSMUST00000116492 NacadQ5SWP3 1504 aa40.9■■■■■ 4.14
Ubp1-203ENSMUST00000116492 Crybg2B7ZCC2 1516 aa40.39■■■■■ 4.06
Ubp1-203ENSMUST00000116492 Ccdc136Q3TVA9 1136 aa40.25■■■■■ 4.03
Ubp1-203ENSMUST00000116492 HrcG5E8J6 738 aa40.21■■■■■ 4.03
Ubp1-203ENSMUST00000116492 Smarca2Q6DIC0 1577 aa40.04■■■■■ 4
Ubp1-203ENSMUST00000116492 Sycp2Q9CUU3 1500 aa39.99■■■■□ 3.99
Ubp1-203ENSMUST00000116492 Trim41Q5NCC3 630 aa39.65■■■■□ 3.94
Ubp1-203ENSMUST00000116492 Rpgrip1Q9EPQ2 1331 aa39.47■■■■□ 3.91
Ubp1-203ENSMUST00000116492 Brd4Q9ESU6 1400 aaKnown RBP39.08■■■■□ 3.85
Ubp1-203ENSMUST00000116492 BicraF8VPZ9 1578 aa39.06■■■■□ 3.84
Ubp1-203ENSMUST00000116492 Cep164Q5DU05 1446 aa39.05■■■■□ 3.84
Ubp1-203ENSMUST00000116492 Cecr2E9Q2Z1 1453 aa38.97■■■■□ 3.83
Ubp1-203ENSMUST00000116492 Acin1Q9JIX8 1338 aaKnown RBP38.89■■■■□ 3.82
Ubp1-203ENSMUST00000116492 Synj1Q8CHC4 1574 aa38.68■■■■□ 3.78
Ubp1-203ENSMUST00000116492 Golga3P55937 1487 aa38.6■■■■□ 3.77
Ubp1-203ENSMUST00000116492 Ehmt2Q9Z148 1263 aaKnown RBP38.56■■■■□ 3.76
Ubp1-203ENSMUST00000116492 Cngb1E1AZ71 1325 aa38.54■■■■□ 3.76
Ubp1-203ENSMUST00000116492 Rsf1E9PWW9 1441 aaKnown RBP38.51■■■■□ 3.76
Ubp1-203ENSMUST00000116492 CftrP26361 1476 aa38.5■■■■□ 3.75
Ubp1-203ENSMUST00000116492 Chic1Q8CBW7 227 aa38.36■■■■□ 3.73
Ubp1-203ENSMUST00000116492 Cttnbp2B9EJA2 1648 aa38.35■■■■□ 3.73
Ubp1-203ENSMUST00000116492 Ccdc88bQ4QRL3 1481 aa38.27■■■■□ 3.72
Ubp1-203ENSMUST00000116492 Smarca4Q3TKT4 1613 aaKnown RBP38.25■■■■□ 3.71
Ubp1-203ENSMUST00000116492 Top2bQ64511 1612 aa38.21■■■■□ 3.71
Ubp1-203ENSMUST00000116492 Esf1Q3V1V3 845 aaKnown RBP38.11■■■■□ 3.69
Ubp1-203ENSMUST00000116492 Gab3Q8BSM5 595 aa37.92■■■■□ 3.66
Ubp1-203ENSMUST00000116492 Cc2d2aQ8CFW7 1633 aa37.74■■■■□ 3.63
Ubp1-203ENSMUST00000116492 Iqgap2Q3UQ44 1575 aa37.71■■■■□ 3.63
Ubp1-203ENSMUST00000116492 Fmn1Q05860 1466 aa37.64■■■■□ 3.62
Ubp1-203ENSMUST00000116492 Atad2bE9Q166 1460 aaKnown RBP37.58■■■■□ 3.61
Ubp1-203ENSMUST00000116492 Top2aQ01320 1528 aaKnown RBP37.44■■■■□ 3.58
Ubp1-203ENSMUST00000116492 Pds5bQ4VA53 1446 aaKnown RBP37.42■■■■□ 3.58
Ubp1-203ENSMUST00000116492 Rapgef2Q8CHG7 1496 aa37.37■■■■□ 3.57
Ubp1-203ENSMUST00000116492 TnnQ80Z71 1560 aa37.08■■■■□ 3.53
Ubp1-203ENSMUST00000116492 Cep162Q6ZQ06 1403 aa37.03■■■■□ 3.52
Ubp1-203ENSMUST00000116492 Pcgf6Q99NA9 353 aa36.99■■■■□ 3.51
Ubp1-203ENSMUST00000116492 Wdr62Q3U3T8 1523 aa36.99■■■■□ 3.51
Ubp1-203ENSMUST00000116492 Frmpd1A2AKB4 1549 aa36.97■■■■□ 3.51
Ubp1-203ENSMUST00000116492 NefmP08553 848 aa36.89■■■■□ 3.5
Ubp1-203ENSMUST00000116492 Mier1Q5UAK0 511 aa36.88■■■■□ 3.49
Ubp1-203ENSMUST00000116492 Eif4g1Q6NZJ6 1600 aaKnown RBP36.81■■■■□ 3.48
Ubp1-203ENSMUST00000116492 Lamc3Q9R0B6 1581 aa36.77■■■■□ 3.48
Ubp1-203ENSMUST00000116492 Ercc6F8VPZ5 1481 aa36.72■■■■□ 3.47
Ubp1-203ENSMUST00000116492 Npm2Q80W85 207 aa36.7■■■■□ 3.47
Ubp1-203ENSMUST00000116492 Myt1lP97500 1187 aa36.63■■■■□ 3.45
Ubp1-203ENSMUST00000116492 Unc13aQ4KUS2 1712 aa36.56■■■■□ 3.44
Ubp1-203ENSMUST00000116492 Kif15Q6P9L6 1387 aa36.5■■■■□ 3.43
Ubp1-203ENSMUST00000116492 NrkQ9R0G8 1455 aa36.5■■■■□ 3.43
Ubp1-203ENSMUST00000116492 Supt5hO55201 1082 aaKnown RBP36.49■■■■□ 3.43
Ubp1-203ENSMUST00000116492 UbtfP25976 765 aaKnown RBP36.46■■■■□ 3.43
Ubp1-203ENSMUST00000116492 Arhgap35Q91YM2 1499 aa36.45■■■■□ 3.42
Ubp1-203ENSMUST00000116492 Camsap1A2AHC3 1581 aa36.41■■■■□ 3.42
Ubp1-203ENSMUST00000116492 Clip1Q922J3 1391 aa36.41■■■■□ 3.42
Ubp1-203ENSMUST00000116492 PtprkP35822 1457 aa36.39■■■■□ 3.42
Ubp1-203ENSMUST00000116492 Shroom4Q1W617 1475 aa36.34■■■■□ 3.41
Ubp1-203ENSMUST00000116492 Zeb1Q64318 1117 aa36.27■■■■□ 3.4
Ubp1-203ENSMUST00000116492 Ccdc18Q640L5 1455 aa36.25■■■■□ 3.39
Ubp1-203ENSMUST00000116492 Map3k1P53349 1493 aa36.24■■■■□ 3.39
Ubp1-203ENSMUST00000116492 Il27Q8K3I6 234 aa36.2■■■■□ 3.39
Ubp1-203ENSMUST00000116492 Phldb1Q6PDH0 1371 aaKnown RBP36.17■■■■□ 3.38
Ubp1-203ENSMUST00000116492 Grin2bQ01097 1482 aa36.17■■■■□ 3.38
Ubp1-203ENSMUST00000116492 Thoc2B1AZI6 1594 aaKnown RBP36.16■■■■□ 3.38
Ubp1-203ENSMUST00000116492 Eea1Q8BL66 1411 aa36.14■■■■□ 3.38
Ubp1-203ENSMUST00000116492 Plekhg3Q4VAC9 1341 aa36.04■■■■□ 3.36
Ubp1-203ENSMUST00000116492 Arap1Q4LDD4 1452 aa36.03■■■■□ 3.36
Ubp1-203ENSMUST00000116492 Mroh2bQ7M6Y6 1581 aa35.99■■■■□ 3.35
Ubp1-203ENSMUST00000116492 Ncapd3Q6ZQK0 1506 aa35.96■■■■□ 3.35
Ubp1-203ENSMUST00000116492 Arhgef5E9Q7D5 1581 aa35.96■■■■□ 3.35
Ubp1-203ENSMUST00000116492 Setd5Q5XJV7 1441 aa35.93■■■■□ 3.34
Ubp1-203ENSMUST00000116492 Cux2P70298 1426 aa35.91■■■■□ 3.34
Ubp1-203ENSMUST00000116492 AqrQ8CFQ3 1481 aaKnown RBP35.87■■■■□ 3.33
Ubp1-203ENSMUST00000116492 Las1lA2BE28 776 aaKnown RBP35.85■■■■□ 3.33
Ubp1-203ENSMUST00000116492 Fam135aQ6NS59 1506 aa35.84■■■■□ 3.33
Ubp1-203ENSMUST00000116492 Baz1bQ9Z277 1479 aa35.83■■■■□ 3.33
Ubp1-203ENSMUST00000116492 Ubl4bQ9CQ84 188 aa35.82■■■■□ 3.32
Ubp1-203ENSMUST00000116492 Erich3F6QRE9 1637 aa35.8■■■■□ 3.32
Ubp1-203ENSMUST00000116492 Efcab5A0JP43 1406 aa35.79■■■■□ 3.32
Ubp1-203ENSMUST00000116492 Sall2Q9QX96 1004 aa35.76■■■■□ 3.32
Ubp1-203ENSMUST00000116492 Npm1Q61937 292 aaKnown RBP35.75■■■■□ 3.31
Ubp1-203ENSMUST00000116492 Tiam1Q60610 1591 aa35.73■■■■□ 3.31
Ubp1-203ENSMUST00000116492 Ankrd26Q811D2 1581 aa35.72■■■■□ 3.31
Ubp1-203ENSMUST00000116492 LrpprcQ6PB66 1392 aaKnown RBP35.7■■■■□ 3.31
Ubp1-203ENSMUST00000116492 PogzQ8BZH4 1409 aaKnown RBP35.66■■■■□ 3.3
Ubp1-203ENSMUST00000116492 Ap3b1Q9Z1T1 1105 aa35.64■■■■□ 3.3
Ubp1-203ENSMUST00000116492 Carmil1Q6EDY6 1374 aa35.61■■■■□ 3.29
Ubp1-203ENSMUST00000116492 Duox2A2AQ99 1517 aa35.59■■■■□ 3.29
Ubp1-203ENSMUST00000116492 Naip1Q9QWK5 1403 aa35.58■■■■□ 3.29
Retrieved 100 of 22,080 RNA–protein pairs in 35.6 ms