RNA–Protein interactions for RNA: ENSMUST00000113693.7

Tpm1-210, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 5 BASIC

Gene Tpm1, Length 1,054 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-210ENSMUST00000113693 Gm35339A0A140LHH9 1649 aa28.18■■■□□ 2.1
Tpm1-210ENSMUST00000113693 NischQ80TM9 1593 aa27.62■■■□□ 2.01
Tpm1-210ENSMUST00000113693 Abcc9P70170 1546 aa27.48■■□□□ 1.99
Tpm1-210ENSMUST00000113693 Abcc8B2RUS7 1588 aa26.9■■□□□ 1.9
Tpm1-210ENSMUST00000113693 ScribQ80U72 1612 aa26.47■■□□□ 1.83
Tpm1-210ENSMUST00000113693 Dnajc5bQ9CQ94 199 aa25.63■■□□□ 1.69
Tpm1-210ENSMUST00000113693 NacadQ5SWP3 1504 aa25.47■■□□□ 1.67
Tpm1-210ENSMUST00000113693 Kdm5dQ62240 1548 aa25.42■■□□□ 1.66
Tpm1-210ENSMUST00000113693 Sycp2Q9CUU3 1500 aa25.03■■□□□ 1.6
Tpm1-210ENSMUST00000113693 BicraF8VPZ9 1578 aa24.86■■□□□ 1.57
Tpm1-210ENSMUST00000113693 Dcaf1Q80TR8 1506 aa24.47■■□□□ 1.51
Tpm1-210ENSMUST00000113693 Thoc2B1AZI6 1594 aaKnown RBP24.41■■□□□ 1.5
Tpm1-210ENSMUST00000113693 Pds5bQ4VA53 1446 aaKnown RBP24.29■■□□□ 1.48
Tpm1-210ENSMUST00000113693 Cc2d2aQ8CFW7 1633 aa24.08■■□□□ 1.45
Tpm1-210ENSMUST00000113693 Rb1cc1Q9ESK9 1588 aa24.04■■□□□ 1.44
Tpm1-210ENSMUST00000113693 Dnajc5P60904 198 aa23.9■■□□□ 1.42
Tpm1-210ENSMUST00000113693 Atad2bE9Q166 1460 aaKnown RBP23.88■■□□□ 1.41
Tpm1-210ENSMUST00000113693 Ercc6F8VPZ5 1481 aa23.85■■□□□ 1.41
Tpm1-210ENSMUST00000113693 Trim41Q5NCC3 630 aa23.72■■□□□ 1.39
Tpm1-210ENSMUST00000113693 Fam135aQ6NS59 1506 aa23.66■■□□□ 1.38
Tpm1-210ENSMUST00000113693 Smarca2Q6DIC0 1577 aa23.57■■□□□ 1.36
Tpm1-210ENSMUST00000113693 Zcchc6Q5BLK4 1491 aaKnown RBP23.56■■□□□ 1.36
Tpm1-210ENSMUST00000113693 Baz1aO88379 1555 aa23.56■■□□□ 1.36
Tpm1-210ENSMUST00000113693 Iqgap2Q3UQ44 1575 aa23.43■■□□□ 1.34
Tpm1-210ENSMUST00000113693 Crybg2B7ZCC2 1516 aa23.41■■□□□ 1.34
Tpm1-210ENSMUST00000113693 Smarca4Q3TKT4 1613 aaKnown RBP23.4■■□□□ 1.34
Tpm1-210ENSMUST00000113693 Rhox8Q6VSS7 320 aa23.37■■□□□ 1.33
Tpm1-210ENSMUST00000113693 Phldb1Q6PDH0 1371 aaKnown RBP23.36■■□□□ 1.33
Tpm1-210ENSMUST00000113693 Ubl4bQ9CQ84 188 aa23.35■■□□□ 1.33
Tpm1-210ENSMUST00000113693 Frmpd1A2AKB4 1549 aa23.32■■□□□ 1.32
Tpm1-210ENSMUST00000113693 Wdr62Q3U3T8 1523 aa23.32■■□□□ 1.32
Tpm1-210ENSMUST00000113693 Ccdc180J3QNE4 1664 aa23.21■■□□□ 1.31
Tpm1-210ENSMUST00000113693 Cecr2E9Q2Z1 1453 aa23.19■■□□□ 1.3
Tpm1-210ENSMUST00000113693 Mrc2Q64449 1479 aa23.18■■□□□ 1.3
Tpm1-210ENSMUST00000113693 Baz1bQ9Z277 1479 aa23.12■■□□□ 1.29
Tpm1-210ENSMUST00000113693 Unc13aQ4KUS2 1712 aa22.98■■□□□ 1.27
Tpm1-210ENSMUST00000113693 Lrriq1Q0P5X1 1673 aa22.78■■□□□ 1.24
Tpm1-210ENSMUST00000113693 Rsf1E9PWW9 1441 aaKnown RBP22.64■■□□□ 1.21
Tpm1-210ENSMUST00000113693 Shroom2A2ALU4 1481 aa22.53■■□□□ 1.2
Tpm1-210ENSMUST00000113693 Kif21aQ9QXL2 1672 aa22.47■■□□□ 1.19
Tpm1-210ENSMUST00000113693 Col17a1Q07563 1470 aa22.47■■□□□ 1.19
Tpm1-210ENSMUST00000113693 Cux2P70298 1426 aa22.46■■□□□ 1.19
Tpm1-210ENSMUST00000113693 CftrP26361 1476 aa22.41■■□□□ 1.18
Tpm1-210ENSMUST00000113693 Cttnbp2B9EJA2 1648 aa22.39■■□□□ 1.18
Tpm1-210ENSMUST00000113693 Eif4g3Q80XI3 1579 aaKnown RBP22.39■■□□□ 1.18
Tpm1-210ENSMUST00000113693 Synj1Q8CHC4 1574 aa22.36■■□□□ 1.17
Tpm1-210ENSMUST00000113693 Pabpn1Q8CCS6 302 aaKnown RBP22.32■■□□□ 1.16
Tpm1-210ENSMUST00000113693 Kif15Q6P9L6 1387 aa22.31■■□□□ 1.16
Tpm1-210ENSMUST00000113693 Pelp1Q9DBD5 1123 aaKnown RBP22.28■■□□□ 1.16
Tpm1-210ENSMUST00000113693 Top2bQ64511 1612 aa22.22■■□□□ 1.15
Tpm1-210ENSMUST00000113693 Esf1Q3V1V3 845 aaKnown RBP22.22■■□□□ 1.15
Tpm1-210ENSMUST00000113693 Npm1Q61937 292 aaKnown RBP22.22■■□□□ 1.15
Tpm1-210ENSMUST00000113693 Urb2E9Q7L1 1524 aaKnown RBP22.11■■□□□ 1.13
Tpm1-210ENSMUST00000113693 Brd4Q9ESU6 1400 aaKnown RBP22.11■■□□□ 1.13
Tpm1-210ENSMUST00000113693 Pcdh10E9PXQ7 1057 aa22.1■■□□□ 1.13
Tpm1-210ENSMUST00000113693 Ccdc136Q3TVA9 1136 aa22.02■■□□□ 1.12
Tpm1-210ENSMUST00000113693 Plb1Q3TTY0 1478 aa22.02■■□□□ 1.12
Tpm1-210ENSMUST00000113693 Cep164Q5DU05 1446 aa21.98■■□□□ 1.11
Tpm1-210ENSMUST00000113693 Il27Q8K3I6 234 aa21.96■■□□□ 1.11
Tpm1-210ENSMUST00000113693 Lamc3Q9R0B6 1581 aa21.91■■□□□ 1.1
Tpm1-210ENSMUST00000113693 Dhx29Q6PGC1 1365 aaKnown RBP21.91■■□□□ 1.1
Tpm1-210ENSMUST00000113693 Ttbk1Q6PCN3 1308 aa21.91■■□□□ 1.1
Tpm1-210ENSMUST00000113693 Zcchc11B2RX14 1644 aaKnown RBP21.9■■□□□ 1.1
Tpm1-210ENSMUST00000113693 Arhgef5E9Q7D5 1581 aa21.81■■□□□ 1.08
Tpm1-210ENSMUST00000113693 Rusc2Q80U22 1514 aa21.8■■□□□ 1.08
Tpm1-210ENSMUST00000113693 Crocc2F6XLV1 1638 aa21.77■■□□□ 1.07
Tpm1-210ENSMUST00000113693 Rtl1Q7M732 1744 aa21.7■■□□□ 1.06
Tpm1-210ENSMUST00000113693 Adgrl3Q80TS3 1537 aa21.7■■□□□ 1.06
Tpm1-210ENSMUST00000113693 LrpprcQ6PB66 1392 aaKnown RBP21.68■■□□□ 1.06
Tpm1-210ENSMUST00000113693 Ift140E9PY46 1464 aa21.66■■□□□ 1.06
Tpm1-210ENSMUST00000113693 Ccdc18Q640L5 1455 aa21.66■■□□□ 1.06
Tpm1-210ENSMUST00000113693 PtprkP35822 1457 aa21.56■■□□□ 1.04
Tpm1-210ENSMUST00000113693 Gm156Q58A37 223 aa21.53■■□□□ 1.04
Tpm1-210ENSMUST00000113693 Cep170Q6A065 1588 aa21.51■■□□□ 1.03
Tpm1-210ENSMUST00000113693 PtprtQ99M80 1454 aa21.51■■□□□ 1.03
Tpm1-210ENSMUST00000113693 Camsap1A2AHC3 1581 aa21.48■■□□□ 1.03
Tpm1-210ENSMUST00000113693 PogzQ8BZH4 1409 aaKnown RBP21.46■■□□□ 1.03
Tpm1-210ENSMUST00000113693 Gapvd1Q6PAR5 1458 aa21.45■■□□□ 1.03
Tpm1-210ENSMUST00000113693 Disp1Q3TDN0 1521 aa21.43■■□□□ 1.02
Tpm1-210ENSMUST00000113693 TnnQ80Z71 1560 aa21.4■■□□□ 1.02
Tpm1-210ENSMUST00000113693 Duox2A2AQ99 1517 aa21.38■■□□□ 1.01
Tpm1-210ENSMUST00000113693 Plekhg3Q4VAC9 1341 aa21.33■■□□□ 1.01
Tpm1-210ENSMUST00000113693 Golga3P55937 1487 aa21.32■■□□□ 1
Tpm1-210ENSMUST00000113693 Cc2d2bA0A286YDU8 1405 aa21.31■■□□□ 1
Tpm1-210ENSMUST00000113693 Nup160Q9Z0W3 1402 aaKnown RBP21.29■■□□□ 1
Tpm1-210ENSMUST00000113693 Setd1bQ8CFT2 1985 aa21.29■■□□□ 1
Tpm1-210ENSMUST00000113693 Fgd6Q69ZL1 1399 aa21.29■■□□□ 1
Tpm1-210ENSMUST00000113693 Cngb1E1AZ71 1325 aa21.29■■□□□ 1
Tpm1-210ENSMUST00000113693 AknaQ80VW7 1404 aa21.28■■□□□ 1
Tpm1-210ENSMUST00000113693 Pprc1Q6NZN1 1644 aa21.27■■□□□ 1
Tpm1-210ENSMUST00000113693 Samd9lQ69Z37 1561 aa21.23■□□□□ 0.99
Tpm1-210ENSMUST00000113693 Ppp1r18Q8BQ30 594 aa21.22■□□□□ 0.99
Tpm1-210ENSMUST00000113693 Pbrm1Q8BSQ9 1634 aaKnown RBP21.22■□□□□ 0.99
Tpm1-210ENSMUST00000113693 Rad54l2Q99NG0 1466 aa21.19■□□□□ 0.98
Tpm1-210ENSMUST00000113693 Ythdc2B2RR83 1445 aaKnown RBP21.18■□□□□ 0.98
Tpm1-210ENSMUST00000113693 Abcc1O35379 1528 aa21.17■□□□□ 0.98
Tpm1-210ENSMUST00000113693 AqrQ8CFQ3 1481 aaKnown RBP21.16■□□□□ 0.98
Tpm1-210ENSMUST00000113693 Rapgef2Q8CHG7 1496 aa21.16■□□□□ 0.98
Tpm1-210ENSMUST00000113693 Grin2bQ01097 1482 aa21.11■□□□□ 0.97
Tpm1-210ENSMUST00000113693 Top2aQ01320 1528 aaKnown RBP21.09■□□□□ 0.97
Retrieved 100 of 22,080 RNA–protein pairs in 70.8 ms