RNA–Protein interactions for RNA: ENSMUST00000112451.7

Sh3kbp1-204, Transcript of SH3 domain-containing kinase-binding protein 1, mousemouse

TSL 1 (best) BASIC

Gene Sh3kbp1, Length 3,914 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1-204ENSMUST00000112451 Gm35339A0A140LHH9 1649 aa20.55■□□□□ 0.88
Sh3kbp1-204ENSMUST00000112451 NischQ80TM9 1593 aa20.46■□□□□ 0.87
Sh3kbp1-204ENSMUST00000112451 Abcc9P70170 1546 aa19.97■□□□□ 0.79
Sh3kbp1-204ENSMUST00000112451 Abcc8B2RUS7 1588 aa19.56■□□□□ 0.72
Sh3kbp1-204ENSMUST00000112451 Rtl1Q7M732 1744 aa18.53■□□□□ 0.56
Sh3kbp1-204ENSMUST00000112451 Dcaf1Q80TR8 1506 aa18.48■□□□□ 0.55
Sh3kbp1-204ENSMUST00000112451 ScribQ80U72 1612 aa18.29■□□□□ 0.52
Sh3kbp1-204ENSMUST00000112451 Rhox8Q6VSS7 320 aa18.25■□□□□ 0.51
Sh3kbp1-204ENSMUST00000112451 Ccdc180J3QNE4 1664 aa18.15■□□□□ 0.5
Sh3kbp1-204ENSMUST00000112451 NacadQ5SWP3 1504 aa17.91■□□□□ 0.46
Sh3kbp1-204ENSMUST00000112451 Rb1cc1Q9ESK9 1588 aa17.91■□□□□ 0.46
Sh3kbp1-204ENSMUST00000112451 Kdm5dQ62240 1548 aa17.89■□□□□ 0.46
Sh3kbp1-204ENSMUST00000112451 Baz1aO88379 1555 aa17.79■□□□□ 0.44
Sh3kbp1-204ENSMUST00000112451 Crybg2B7ZCC2 1516 aa17.73■□□□□ 0.43
Sh3kbp1-204ENSMUST00000112451 Zcchc6Q5BLK4 1491 aaKnown RBP17.64■□□□□ 0.41
Sh3kbp1-204ENSMUST00000112451 Sycp2Q9CUU3 1500 aa17.5■□□□□ 0.39
Sh3kbp1-204ENSMUST00000112451 Smarca2Q6DIC0 1577 aa17.36■□□□□ 0.37
Sh3kbp1-204ENSMUST00000112451 HrcG5E8J6 738 aa17.06■□□□□ 0.32
Sh3kbp1-204ENSMUST00000112451 BicraF8VPZ9 1578 aa17.05■□□□□ 0.32
Sh3kbp1-204ENSMUST00000112451 Trim41Q5NCC3 630 aa16.95■□□□□ 0.3
Sh3kbp1-204ENSMUST00000112451 Brd4Q9ESU6 1400 aaKnown RBP16.9■□□□□ 0.3
Sh3kbp1-204ENSMUST00000112451 Ccdc136Q3TVA9 1136 aa16.88■□□□□ 0.29
Sh3kbp1-204ENSMUST00000112451 Cecr2E9Q2Z1 1453 aa16.75■□□□□ 0.27
Sh3kbp1-204ENSMUST00000112451 Smarca4Q3TKT4 1613 aaKnown RBP16.7■□□□□ 0.26
Sh3kbp1-204ENSMUST00000112451 Cttnbp2B9EJA2 1648 aa16.69■□□□□ 0.26
Sh3kbp1-204ENSMUST00000112451 Synj1Q8CHC4 1574 aa16.67■□□□□ 0.26
Sh3kbp1-204ENSMUST00000112451 CftrP26361 1476 aa16.65■□□□□ 0.26
Sh3kbp1-204ENSMUST00000112451 Cep164Q5DU05 1446 aa16.62■□□□□ 0.25
Sh3kbp1-204ENSMUST00000112451 Golga3P55937 1487 aa16.6■□□□□ 0.25
Sh3kbp1-204ENSMUST00000112451 Top2bQ64511 1612 aa16.53■□□□□ 0.24
Sh3kbp1-204ENSMUST00000112451 Atad2bE9Q166 1460 aaKnown RBP16.48■□□□□ 0.23
Sh3kbp1-204ENSMUST00000112451 Pds5bQ4VA53 1446 aaKnown RBP16.47■□□□□ 0.23
Sh3kbp1-204ENSMUST00000112451 Iqgap2Q3UQ44 1575 aa16.44■□□□□ 0.22
Sh3kbp1-204ENSMUST00000112451 Rpgrip1Q9EPQ2 1331 aa16.36■□□□□ 0.21
Sh3kbp1-204ENSMUST00000112451 Rsf1E9PWW9 1441 aaKnown RBP16.33■□□□□ 0.2
Sh3kbp1-204ENSMUST00000112451 Fmn1Q05860 1466 aa16.27■□□□□ 0.2
Sh3kbp1-204ENSMUST00000112451 Cngb1E1AZ71 1325 aa16.24■□□□□ 0.19
Sh3kbp1-204ENSMUST00000112451 Ccdc88bQ4QRL3 1481 aa16.23■□□□□ 0.19
Sh3kbp1-204ENSMUST00000112451 Esf1Q3V1V3 845 aaKnown RBP16.2■□□□□ 0.18
Sh3kbp1-204ENSMUST00000112451 Wdr62Q3U3T8 1523 aa16.19■□□□□ 0.18
Sh3kbp1-204ENSMUST00000112451 Cc2d2aQ8CFW7 1633 aa16.18■□□□□ 0.18
Sh3kbp1-204ENSMUST00000112451 TnnQ80Z71 1560 aa16.16■□□□□ 0.18
Sh3kbp1-204ENSMUST00000112451 Top2aQ01320 1528 aaKnown RBP16.13■□□□□ 0.17
Sh3kbp1-204ENSMUST00000112451 Chic1Q8CBW7 227 aa16.13■□□□□ 0.17
Sh3kbp1-204ENSMUST00000112451 Ercc6F8VPZ5 1481 aa16.1■□□□□ 0.17
Sh3kbp1-204ENSMUST00000112451 Frmpd1A2AKB4 1549 aa16.1■□□□□ 0.17
Sh3kbp1-204ENSMUST00000112451 Lamc3Q9R0B6 1581 aa16.04■□□□□ 0.16
Sh3kbp1-204ENSMUST00000112451 Acin1Q9JIX8 1338 aaKnown RBP16.03■□□□□ 0.16
Sh3kbp1-204ENSMUST00000112451 Rapgef2Q8CHG7 1496 aa16.01■□□□□ 0.15
Sh3kbp1-204ENSMUST00000112451 Thoc2B1AZI6 1594 aaKnown RBP15.99■□□□□ 0.15
Sh3kbp1-204ENSMUST00000112451 Unc13aQ4KUS2 1712 aa15.96■□□□□ 0.15
Sh3kbp1-204ENSMUST00000112451 Baz1bQ9Z277 1479 aa15.92■□□□□ 0.14
Sh3kbp1-204ENSMUST00000112451 Eif4g1Q6NZJ6 1600 aaKnown RBP15.86■□□□□ 0.13
Sh3kbp1-204ENSMUST00000112451 Phldb1Q6PDH0 1371 aaKnown RBP15.84■□□□□ 0.13
Sh3kbp1-204ENSMUST00000112451 Fam135aQ6NS59 1506 aa15.84■□□□□ 0.13
Sh3kbp1-204ENSMUST00000112451 Camsap1A2AHC3 1581 aa15.79■□□□□ 0.12
Sh3kbp1-204ENSMUST00000112451 Cep162Q6ZQ06 1403 aa15.79■□□□□ 0.12
Sh3kbp1-204ENSMUST00000112451 NrkQ9R0G8 1455 aa15.78■□□□□ 0.12
Sh3kbp1-204ENSMUST00000112451 Gab3Q8BSM5 595 aa15.78■□□□□ 0.12
Sh3kbp1-204ENSMUST00000112451 Kif15Q6P9L6 1387 aa15.74■□□□□ 0.11
Sh3kbp1-204ENSMUST00000112451 Ccdc18Q640L5 1455 aa15.73■□□□□ 0.11
Sh3kbp1-204ENSMUST00000112451 Map3k1P53349 1493 aa15.7■□□□□ 0.1
Sh3kbp1-204ENSMUST00000112451 Shroom4Q1W617 1475 aa15.69■□□□□ 0.1
Sh3kbp1-204ENSMUST00000112451 Grin2bQ01097 1482 aa15.65■□□□□ 0.1
Sh3kbp1-204ENSMUST00000112451 Arhgap35Q91YM2 1499 aa15.61■□□□□ 0.09
Sh3kbp1-204ENSMUST00000112451 AqrQ8CFQ3 1481 aaKnown RBP15.59■□□□□ 0.09
Sh3kbp1-204ENSMUST00000112451 Ehmt2Q9Z148 1263 aaKnown RBP15.58■□□□□ 0.09
Sh3kbp1-204ENSMUST00000112451 Cux2P70298 1426 aa15.56■□□□□ 0.08
Sh3kbp1-204ENSMUST00000112451 Efcab5A0JP43 1406 aa15.55■□□□□ 0.08
Sh3kbp1-204ENSMUST00000112451 PtprkP35822 1457 aa15.54■□□□□ 0.08
Sh3kbp1-204ENSMUST00000112451 Mroh2bQ7M6Y6 1581 aa15.52■□□□□ 0.07
Sh3kbp1-204ENSMUST00000112451 Npm2Q80W85 207 aa15.51■□□□□ 0.07
Sh3kbp1-204ENSMUST00000112451 Ubl4bQ9CQ84 188 aa15.49■□□□□ 0.07
Sh3kbp1-204ENSMUST00000112451 PogzQ8BZH4 1409 aaKnown RBP15.48■□□□□ 0.07
Sh3kbp1-204ENSMUST00000112451 LrpprcQ6PB66 1392 aaKnown RBP15.47■□□□□ 0.07
Sh3kbp1-204ENSMUST00000112451 Erich3F6QRE9 1637 aa15.47■□□□□ 0.07
Sh3kbp1-204ENSMUST00000112451 Eea1Q8BL66 1411 aa15.44■□□□□ 0.06
Sh3kbp1-204ENSMUST00000112451 Clip1Q922J3 1391 aa15.43■□□□□ 0.06
Sh3kbp1-204ENSMUST00000112451 NefmP08553 848 aa15.42■□□□□ 0.06
Sh3kbp1-204ENSMUST00000112451 Npm1Q61937 292 aaKnown RBP15.41■□□□□ 0.06
Sh3kbp1-204ENSMUST00000112451 Duox2A2AQ99 1517 aa15.39■□□□□ 0.05
Sh3kbp1-204ENSMUST00000112451 Mrc2Q64449 1479 aa15.39■□□□□ 0.05
Sh3kbp1-204ENSMUST00000112451 Arhgef5E9Q7D5 1581 aa15.38■□□□□ 0.05
Sh3kbp1-204ENSMUST00000112451 Carmil1Q6EDY6 1374 aa15.37■□□□□ 0.05
Sh3kbp1-204ENSMUST00000112451 Polr1aO35134 1717 aaKnown RBP15.36■□□□□ 0.05
Sh3kbp1-204ENSMUST00000112451 Gpatch8A2A6A1 1505 aa15.35■□□□□ 0.05
Sh3kbp1-204ENSMUST00000112451 SynmQ70IV5 1561 aa15.35■□□□□ 0.05
Sh3kbp1-204ENSMUST00000112451 Rpap1Q80TE0 1409 aa15.34■□□□□ 0.05
Sh3kbp1-204ENSMUST00000112451 Ankrd26Q811D2 1581 aa15.34■□□□□ 0.05
Sh3kbp1-204ENSMUST00000112451 Arap1Q4LDD4 1452 aa15.33■□□□□ 0.04
Sh3kbp1-204ENSMUST00000112451 Myt1lP97500 1187 aa15.33■□□□□ 0.04
Sh3kbp1-204ENSMUST00000112451 Il27Q8K3I6 234 aa15.33■□□□□ 0.04
Sh3kbp1-204ENSMUST00000112451 Crocc2F6XLV1 1638 aa15.32■□□□□ 0.04
Sh3kbp1-204ENSMUST00000112451 Dhx29Q6PGC1 1365 aaKnown RBP15.3■□□□□ 0.04
Sh3kbp1-204ENSMUST00000112451 Peg3Q3URU2 1571 aa15.3■□□□□ 0.04
Sh3kbp1-204ENSMUST00000112451 Tiam1Q60610 1591 aa15.3■□□□□ 0.04
Sh3kbp1-204ENSMUST00000112451 Mier1Q5UAK0 511 aa15.29■□□□□ 0.04
Sh3kbp1-204ENSMUST00000112451 Lmo7E9PYF4 1699 aaKnown RBP15.29■□□□□ 0.04
Sh3kbp1-204ENSMUST00000112451 Setd5Q5XJV7 1441 aa15.29■□□□□ 0.04
Sh3kbp1-204ENSMUST00000112451 Kif21aQ9QXL2 1672 aa15.28■□□□□ 0.04
Retrieved 100 of 22,080 RNA–protein pairs in 192.4 ms