RNA–Protein interactions for RNA: ENSMUST00000109213.8

Trim7-202, Transcript of E3 ubiquitin-protein ligase TRIM7, mousemouse

TSL 1 (best) BASIC

Gene Trim7, Length 2,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim7-202ENSMUST00000109213 NischQ80TM9 1593 aa31.99■■■□□ 2.71
Trim7-202ENSMUST00000109213 Gm35339A0A140LHH9 1649 aa31.69■■■□□ 2.66
Trim7-202ENSMUST00000109213 Abcc9P70170 1546 aa31.1■■■□□ 2.57
Trim7-202ENSMUST00000109213 Abcc8B2RUS7 1588 aa30.49■■■□□ 2.47
Trim7-202ENSMUST00000109213 Rhox8Q6VSS7 320 aa29.19■■■□□ 2.26
Trim7-202ENSMUST00000109213 Rtl1Q7M732 1744 aa28.75■■■□□ 2.19
Trim7-202ENSMUST00000109213 ScribQ80U72 1612 aa28.55■■■□□ 2.16
Trim7-202ENSMUST00000109213 Dcaf1Q80TR8 1506 aa28.47■■■□□ 2.15
Trim7-202ENSMUST00000109213 Ccdc180J3QNE4 1664 aa28.13■■■□□ 2.09
Trim7-202ENSMUST00000109213 Rb1cc1Q9ESK9 1588 aa28■■■□□ 2.07
Trim7-202ENSMUST00000109213 Kdm5dQ62240 1548 aa27.95■■■□□ 2.06
Trim7-202ENSMUST00000109213 Zcchc6Q5BLK4 1491 aaKnown RBP27.81■■■□□ 2.04
Trim7-202ENSMUST00000109213 NacadQ5SWP3 1504 aa27.78■■■□□ 2.04
Trim7-202ENSMUST00000109213 Baz1aO88379 1555 aa27.7■■■□□ 2.03
Trim7-202ENSMUST00000109213 Crybg2B7ZCC2 1516 aa27.32■■□□□ 1.96
Trim7-202ENSMUST00000109213 Sycp2Q9CUU3 1500 aa27.19■■□□□ 1.94
Trim7-202ENSMUST00000109213 Ccdc136Q3TVA9 1136 aa27.12■■□□□ 1.93
Trim7-202ENSMUST00000109213 Smarca2Q6DIC0 1577 aa27.07■■□□□ 1.92
Trim7-202ENSMUST00000109213 HrcG5E8J6 738 aa26.86■■□□□ 1.89
Trim7-202ENSMUST00000109213 Trim41Q5NCC3 630 aa26.66■■□□□ 1.86
Trim7-202ENSMUST00000109213 BicraF8VPZ9 1578 aa26.61■■□□□ 1.85
Trim7-202ENSMUST00000109213 Cecr2E9Q2Z1 1453 aa26.43■■□□□ 1.82
Trim7-202ENSMUST00000109213 Brd4Q9ESU6 1400 aaKnown RBP26.37■■□□□ 1.81
Trim7-202ENSMUST00000109213 Synj1Q8CHC4 1574 aa26.18■■□□□ 1.78
Trim7-202ENSMUST00000109213 Cep164Q5DU05 1446 aa26.14■■□□□ 1.78
Trim7-202ENSMUST00000109213 CftrP26361 1476 aa26.05■■□□□ 1.76
Trim7-202ENSMUST00000109213 Rpgrip1Q9EPQ2 1331 aa26.03■■□□□ 1.76
Trim7-202ENSMUST00000109213 Golga3P55937 1487 aa26.01■■□□□ 1.76
Trim7-202ENSMUST00000109213 Cngb1E1AZ71 1325 aa25.96■■□□□ 1.75
Trim7-202ENSMUST00000109213 Smarca4Q3TKT4 1613 aaKnown RBP25.95■■□□□ 1.74
Trim7-202ENSMUST00000109213 Cttnbp2B9EJA2 1648 aa25.94■■□□□ 1.74
Trim7-202ENSMUST00000109213 Rsf1E9PWW9 1441 aaKnown RBP25.91■■□□□ 1.74
Trim7-202ENSMUST00000109213 Chic1Q8CBW7 227 aa25.83■■□□□ 1.73
Trim7-202ENSMUST00000109213 Top2bQ64511 1612 aa25.79■■□□□ 1.72
Trim7-202ENSMUST00000109213 Ccdc88bQ4QRL3 1481 aa25.79■■□□□ 1.72
Trim7-202ENSMUST00000109213 Esf1Q3V1V3 845 aaKnown RBP25.73■■□□□ 1.71
Trim7-202ENSMUST00000109213 Acin1Q9JIX8 1338 aaKnown RBP25.7■■□□□ 1.7
Trim7-202ENSMUST00000109213 Ehmt2Q9Z148 1263 aaKnown RBP25.69■■□□□ 1.7
Trim7-202ENSMUST00000109213 Iqgap2Q3UQ44 1575 aa25.61■■□□□ 1.69
Trim7-202ENSMUST00000109213 Atad2bE9Q166 1460 aaKnown RBP25.56■■□□□ 1.68
Trim7-202ENSMUST00000109213 Cc2d2aQ8CFW7 1633 aa25.49■■□□□ 1.67
Trim7-202ENSMUST00000109213 Gab3Q8BSM5 595 aa25.48■■□□□ 1.67
Trim7-202ENSMUST00000109213 Pds5bQ4VA53 1446 aaKnown RBP25.47■■□□□ 1.67
Trim7-202ENSMUST00000109213 Fmn1Q05860 1466 aa25.39■■□□□ 1.65
Trim7-202ENSMUST00000109213 Top2aQ01320 1528 aaKnown RBP25.24■■□□□ 1.63
Trim7-202ENSMUST00000109213 Frmpd1A2AKB4 1549 aa25.15■■□□□ 1.62
Trim7-202ENSMUST00000109213 Wdr62Q3U3T8 1523 aa25.15■■□□□ 1.62
Trim7-202ENSMUST00000109213 Rapgef2Q8CHG7 1496 aa25.14■■□□□ 1.61
Trim7-202ENSMUST00000109213 TnnQ80Z71 1560 aa25.08■■□□□ 1.61
Trim7-202ENSMUST00000109213 Ercc6F8VPZ5 1481 aa24.98■■□□□ 1.59
Trim7-202ENSMUST00000109213 Lamc3Q9R0B6 1581 aa24.92■■□□□ 1.58
Trim7-202ENSMUST00000109213 Cep162Q6ZQ06 1403 aa24.91■■□□□ 1.58
Trim7-202ENSMUST00000109213 Unc13aQ4KUS2 1712 aa24.89■■□□□ 1.57
Trim7-202ENSMUST00000109213 Eif4g1Q6NZJ6 1600 aaKnown RBP24.79■■□□□ 1.56
Trim7-202ENSMUST00000109213 Kif15Q6P9L6 1387 aa24.75■■□□□ 1.55
Trim7-202ENSMUST00000109213 Thoc2B1AZI6 1594 aaKnown RBP24.71■■□□□ 1.55
Trim7-202ENSMUST00000109213 Npm2Q80W85 207 aa24.69■■□□□ 1.54
Trim7-202ENSMUST00000109213 Pcgf6Q99NA9 353 aa24.68■■□□□ 1.54
Trim7-202ENSMUST00000109213 Camsap1A2AHC3 1581 aa24.66■■□□□ 1.54
Trim7-202ENSMUST00000109213 Myt1lP97500 1187 aa24.64■■□□□ 1.53
Trim7-202ENSMUST00000109213 NrkQ9R0G8 1455 aa24.63■■□□□ 1.53
Trim7-202ENSMUST00000109213 Phldb1Q6PDH0 1371 aaKnown RBP24.62■■□□□ 1.53
Trim7-202ENSMUST00000109213 PtprkP35822 1457 aa24.61■■□□□ 1.53
Trim7-202ENSMUST00000109213 Mier1Q5UAK0 511 aa24.6■■□□□ 1.53
Trim7-202ENSMUST00000109213 Arhgap35Q91YM2 1499 aa24.58■■□□□ 1.52
Trim7-202ENSMUST00000109213 Shroom4Q1W617 1475 aa24.53■■□□□ 1.52
Trim7-202ENSMUST00000109213 Il27Q8K3I6 234 aa24.52■■□□□ 1.52
Trim7-202ENSMUST00000109213 Ccdc18Q640L5 1455 aa24.52■■□□□ 1.52
Trim7-202ENSMUST00000109213 Grin2bQ01097 1482 aa24.47■■□□□ 1.51
Trim7-202ENSMUST00000109213 NefmP08553 848 aa24.45■■□□□ 1.51
Trim7-202ENSMUST00000109213 Clip1Q922J3 1391 aa24.45■■□□□ 1.5
Trim7-202ENSMUST00000109213 Fam135aQ6NS59 1506 aa24.44■■□□□ 1.5
Trim7-202ENSMUST00000109213 Map3k1P53349 1493 aa24.41■■□□□ 1.5
Trim7-202ENSMUST00000109213 UbtfP25976 765 aaKnown RBP24.39■■□□□ 1.5
Trim7-202ENSMUST00000109213 Cux2P70298 1426 aa24.39■■□□□ 1.5
Trim7-202ENSMUST00000109213 Ubl4bQ9CQ84 188 aa24.38■■□□□ 1.49
Trim7-202ENSMUST00000109213 Mroh2bQ7M6Y6 1581 aa24.29■■□□□ 1.48
Trim7-202ENSMUST00000109213 Eea1Q8BL66 1411 aa24.28■■□□□ 1.48
Trim7-202ENSMUST00000109213 Arap1Q4LDD4 1452 aa24.25■■□□□ 1.47
Trim7-202ENSMUST00000109213 Npm1Q61937 292 aaKnown RBP24.24■■□□□ 1.47
Trim7-202ENSMUST00000109213 Efcab5A0JP43 1406 aa24.21■■□□□ 1.47
Trim7-202ENSMUST00000109213 Baz1bQ9Z277 1479 aa24.21■■□□□ 1.47
Trim7-202ENSMUST00000109213 LrpprcQ6PB66 1392 aaKnown RBP24.2■■□□□ 1.47
Trim7-202ENSMUST00000109213 Plekhg3Q4VAC9 1341 aa24.2■■□□□ 1.46
Trim7-202ENSMUST00000109213 AqrQ8CFQ3 1481 aaKnown RBP24.19■■□□□ 1.46
Trim7-202ENSMUST00000109213 Arhgef5E9Q7D5 1581 aa24.18■■□□□ 1.46
Trim7-202ENSMUST00000109213 Setd5Q5XJV7 1441 aa24.17■■□□□ 1.46
Trim7-202ENSMUST00000109213 PogzQ8BZH4 1409 aaKnown RBP24.17■■□□□ 1.46
Trim7-202ENSMUST00000109213 Zeb1Q64318 1117 aa24.14■■□□□ 1.45
Trim7-202ENSMUST00000109213 Duox2A2AQ99 1517 aa24.12■■□□□ 1.45
Trim7-202ENSMUST00000109213 Supt5hO55201 1082 aaKnown RBP24.12■■□□□ 1.45
Trim7-202ENSMUST00000109213 Erich3F6QRE9 1637 aa24.11■■□□□ 1.45
Trim7-202ENSMUST00000109213 Ankrd26Q811D2 1581 aa24.09■■□□□ 1.45
Trim7-202ENSMUST00000109213 Ncapd3Q6ZQK0 1506 aa24.08■■□□□ 1.45
Trim7-202ENSMUST00000109213 Carmil1Q6EDY6 1374 aa24.03■■□□□ 1.44
Trim7-202ENSMUST00000109213 Tiam1Q60610 1591 aa24.02■■□□□ 1.44
Trim7-202ENSMUST00000109213 Ap3b1Q9Z1T1 1105 aa24.01■■□□□ 1.43
Trim7-202ENSMUST00000109213 Dhx29Q6PGC1 1365 aaKnown RBP23.99■■□□□ 1.43
Trim7-202ENSMUST00000109213 Samd9lQ69Z37 1561 aa23.96■■□□□ 1.43
Trim7-202ENSMUST00000109213 SynmQ70IV5 1561 aa23.95■■□□□ 1.42
Retrieved 100 of 22,080 RNA–protein pairs in 82.8 ms